| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is ate [H]
Identifier: 238027535
GI number: 238027535
Start: 2133020
End: 2133859
Strand: Direct
Name: ate [H]
Synonym: bglu_1g19530
Alternate gene names: 238027535
Gene position: 2133020-2133859 (Clockwise)
Preceding gene: 238027534
Following gene: 238027536
Centisome position: 54.6
GC content: 67.62
Gene sequence:
>840_bases ATGACTCATCCCACTGAGCTGCCGCTTTCACCGCTTTCGGCATTGCAGTTCTATGCCACCGCGCCCTACCCATGCAGTTA TCTCGACGGCCGCGTCGCGCGCTCGCAGGTGGCGACGCCGAGCCATCTGATCAATTCCGACATCTACACCGAGCTCGTCA AGGCCGGCTTTCGCCGCTCGGGCGTGTTCACCTACCGCCCCTACTGCGACGGCTGCCGCGCCTGCATCCCGGTGCGCGTG CCGGTGGACGCATTCACGCCGGGCCGCACCCAGCGCAAGATGTGGAACCGCCATCGCGCGCTGCTGGCCACGGTGTCGCC GCTGCATTACGACGAGGAGCACTACGCGCTCTACATGCGCTATCAGTCCGCCCGGCACGCAGGCGGCGGCATGGATCGCG ACAGCCGTGACCAGTACGAGCAGTTCCTGCTGCAAAGCCGGATCAATTCGCGGCTAGTGGAGTTCCGCGAGCCCGTGCCG GGCGAGCAAGGCGCGACCACGCGCGGCACGCTGCGCATGATCAGCATGATCGACATCCTCGGCGATGGCCTCTCGTCGGT CTATACGTTCTTCGAACCCGGACACGGGCACGCCAGCTACGGCACCTACAACATCCTCTGGCAGATCGAGCAGGCACGCA GCCTGCGCCTGCCCTACGTCTATCTCGGCTACTGGATCCGCGAAAGCCCGAAGATGGCGTACAAGGCGAATTTCCGGCCG CTCGAGGGGCTCGTCGACGGCCGCTGGAAGCCGCTCGACCCGGGCGCCGTGGGCCTGCCGCCCGTCGATGCGGCGCTCGG GCGCGCGCCGCTGCCGGCCGGCCACGGCGGCACGCGCTGA
Upstream 100 bases:
>100_bases GCCGGCCTGCGGCATCCGTTCGGGTCCGGCACGGCGCGCGACGGGCCGCGGCGCCGCGCGCCGGGCCCGCTGACGCGCCA GTCCGCTTCGAGAGCTGCCC
Downstream 100 bases:
>100_bases CGCTGCGGCGGCCGGGTCCGGCCGCCGTTCGGTTAAAATACCGGGTTATCAATTTTCGGCGCCGCCCTTCCCTTCGTGTT CAGTTCCCTTTATCCGCTTG
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase [H]
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTHPTELPLSPLSALQFYATAPYPCSYLDGRVARSQVATPSHLINSDIYTELVKAGFRRSGVFTYRPYCDGCRACIPVRV PVDAFTPGRTQRKMWNRHRALLATVSPLHYDEEHYALYMRYQSARHAGGGMDRDSRDQYEQFLLQSRINSRLVEFREPVP GEQGATTRGTLRMISMIDILGDGLSSVYTFFEPGHGHASYGTYNILWQIEQARSLRLPYVYLGYWIRESPKMAYKANFRP LEGLVDGRWKPLDPGAVGLPPVDAALGRAPLPAGHGGTR
Sequences:
>Translated_279_residues MTHPTELPLSPLSALQFYATAPYPCSYLDGRVARSQVATPSHLINSDIYTELVKAGFRRSGVFTYRPYCDGCRACIPVRV PVDAFTPGRTQRKMWNRHRALLATVSPLHYDEEHYALYMRYQSARHAGGGMDRDSRDQYEQFLLQSRINSRLVEFREPVP GEQGATTRGTLRMISMIDILGDGLSSVYTFFEPGHGHASYGTYNILWQIEQARSLRLPYVYLGYWIRESPKMAYKANFRP LEGLVDGRWKPLDPGAVGLPPVDAALGRAPLPAGHGGTR >Mature_278_residues THPTELPLSPLSALQFYATAPYPCSYLDGRVARSQVATPSHLINSDIYTELVKAGFRRSGVFTYRPYCDGCRACIPVRVP VDAFTPGRTQRKMWNRHRALLATVSPLHYDEEHYALYMRYQSARHAGGGMDRDSRDQYEQFLLQSRINSRLVEFREPVPG EQGATTRGTLRMISMIDILGDGLSSVYTFFEPGHGHASYGTYNILWQIEQARSLRLPYVYLGYWIRESPKMAYKANFRPL EGLVDGRWKPLDPGAVGLPPVDAALGRAPLPAGHGGTR
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential) [H]
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family [H]
Homologues:
Organism=Homo sapiens, GI50345877, Length=156, Percent_Identity=30.7692307692308, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI32563965, Length=160, Percent_Identity=31.875, Blast_Score=71, Evalue=8e-13, Organism=Caenorhabditis elegans, GI32563963, Length=160, Percent_Identity=31.875, Blast_Score=70, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6321421, Length=295, Percent_Identity=23.3898305084746, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 [H]
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N [H]
EC number: =2.3.2.8 [H]
Molecular weight: Translated: 31398; Mature: 31267
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHPTELPLSPLSALQFYATAPYPCSYLDGRVARSQVATPSHLINSDIYTELVKAGFRRS CCCCCCCCCCHHHHHHHHHCCCCCCHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC GVFTYRPYCDGCRACIPVRVPVDAFTPGRTQRKMWNRHRALLATVSPLHYDEEHYALYMR CCEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE YQSARHAGGGMDRDSRDQYEQFLLQSRINSRLVEFREPVPGEQGATTRGTLRMISMIDIL EHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH GDGLSSVYTFFEPGHGHASYGTYNILWQIEQARSLRLPYVYLGYWIRESPKMAYKANFRP HCCHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEHHHHCCCCCEEECCCCC LEGLVDGRWKPLDPGAVGLPPVDAALGRAPLPAGHGGTR HHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC >Mature Secondary Structure THPTELPLSPLSALQFYATAPYPCSYLDGRVARSQVATPSHLINSDIYTELVKAGFRRS CCCCCCCCCHHHHHHHHHCCCCCCHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC GVFTYRPYCDGCRACIPVRVPVDAFTPGRTQRKMWNRHRALLATVSPLHYDEEHYALYMR CCEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE YQSARHAGGGMDRDSRDQYEQFLLQSRINSRLVEFREPVPGEQGATTRGTLRMISMIDIL EHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH GDGLSSVYTFFEPGHGHASYGTYNILWQIEQARSLRLPYVYLGYWIRESPKMAYKANFRP HCCHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEHHHHCCCCCEEECCCCC LEGLVDGRWKPLDPGAVGLPPVDAALGRAPLPAGHGGTR HHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA