| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is gal [H]
Identifier: 238027388
GI number: 238027388
Start: 1959523
End: 1960461
Strand: Reverse
Name: gal [H]
Synonym: bglu_1g17840
Alternate gene names: 238027388
Gene position: 1960461-1959523 (Counterclockwise)
Preceding gene: 238027389
Following gene: 238027387
Centisome position: 50.18
GC content: 71.99
Gene sequence:
>939_bases ATGACCATCAACACGACTACCTATACCCTCGGCATCGTCGGCGTCGGCAAGATCGCGCGCGACCAGCACCTGCCCGCCAT CGCCACCAATCCGGGCTTCCAGCTGGTGGCCGCCGCGAGCCGTAACGCGCAGGTCGAGGCGGTGCGCAACTACCCCGATC TCGCGGCGCTGCTGGCCGCCGAGCCGGGCCTTCACGCCGTCTCGCTGTGTGCCCCGCCGCAGGTCCGCTACGAGCAGGCG CGCGCCGCGCTGCTGGCCGGCAAGCACGTGATGCTCGAAAAGCCGCCCGGCGCCGGCGTGAGCGAGGTGGAGGCGCTGCG CGCGCTGGCGCGCCAGCACAACCGCACGCTGTTCGCCACCTGGCATTCGCGCCATGCGAGCGCGGTGGAGCCGGCCCGCG CCTGGCTGGCCGGACGCGAGGTGCGCGAGGTGCAGGTGCGCTGGAAGGAGGACGTGCGGCGCTGGCATCCCGGGCAGCAG TGGATCTGGGAGGCGGGCGGCCTCGGCGTGTTCGATCCGGGCATCAACGCGCTGTCGATCGTCACGCAGATCCTGCCGAA CCCGGTGCTGCTGCGCGCGGCCACGCTGCACGTGCCGGCCGACTGCGCGACGCCGATCGCCGCCGAGCTGGACTGCGTGG ACGCGGCCGGCGCGCCGGTGCGCGCCGAATTCGACTGGCGCCACGGCCCGGTCGAGCAATGGGAGATCGATGTCGACACC GCCGACGGACGGCTGTCGATCGCCGAGGGCGGCAAGCGCCTGACGATTGCCGGCGAGGCGGTCGCGCTCGATGCCGAGCG CGAATACGCCTCGCTCTACGAGCGGTTCCACTGGCTGATCGGCCATGGCACCGACGACGTCGACGTGAGCCCGCTGCGGC TCGTGGCCGACGCATTCATGCTGGGCAAGCACGTCGAGGTCGAGCCGTTCGGTCACTGA
Upstream 100 bases:
>100_bases GCTGCCGGCCATCCATCCGGACACGCGCGCCGAGCTGCTCGCGATCGCGCGCCGGCTCGACCCGCTCGTGCTGCGCTGGG GCAAGTGAGATCCACGGACC
Downstream 100 bases:
>100_bases ACGGCCCGGCCTCGATCATCACCATAACCGAGGAGACAGAAACATGATTCGCAACACCCGCCGCCTGACCCTGCGCGTCC TGCTCGCAGCCATGTGCGCC
Product: dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MTINTTTYTLGIVGVGKIARDQHLPAIATNPGFQLVAAASRNAQVEAVRNYPDLAALLAAEPGLHAVSLCAPPQVRYEQA RAALLAGKHVMLEKPPGAGVSEVEALRALARQHNRTLFATWHSRHASAVEPARAWLAGREVREVQVRWKEDVRRWHPGQQ WIWEAGGLGVFDPGINALSIVTQILPNPVLLRAATLHVPADCATPIAAELDCVDAAGAPVRAEFDWRHGPVEQWEIDVDT ADGRLSIAEGGKRLTIAGEAVALDAEREYASLYERFHWLIGHGTDDVDVSPLRLVADAFMLGKHVEVEPFGH
Sequences:
>Translated_312_residues MTINTTTYTLGIVGVGKIARDQHLPAIATNPGFQLVAAASRNAQVEAVRNYPDLAALLAAEPGLHAVSLCAPPQVRYEQA RAALLAGKHVMLEKPPGAGVSEVEALRALARQHNRTLFATWHSRHASAVEPARAWLAGREVREVQVRWKEDVRRWHPGQQ WIWEAGGLGVFDPGINALSIVTQILPNPVLLRAATLHVPADCATPIAAELDCVDAAGAPVRAEFDWRHGPVEQWEIDVDT ADGRLSIAEGGKRLTIAGEAVALDAEREYASLYERFHWLIGHGTDDVDVSPLRLVADAFMLGKHVEVEPFGH >Mature_311_residues TINTTTYTLGIVGVGKIARDQHLPAIATNPGFQLVAAASRNAQVEAVRNYPDLAALLAAEPGLHAVSLCAPPQVRYEQAR AALLAGKHVMLEKPPGAGVSEVEALRALARQHNRTLFATWHSRHASAVEPARAWLAGREVREVQVRWKEDVRRWHPGQQW IWEAGGLGVFDPGINALSIVTQILPNPVLLRAATLHVPADCATPIAAELDCVDAAGAPVRAEFDWRHGPVEQWEIDVDTA DGRLSIAEGGKRLTIAGEAVALDAEREYASLYERFHWLIGHGTDDVDVSPLRLVADAFMLGKHVEVEPFGH
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787574, Length=194, Percent_Identity=29.3814432989691, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: =1.1.1.48 [H]
Molecular weight: Translated: 33915; Mature: 33784
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTINTTTYTLGIVGVGKIARDQHLPAIATNPGFQLVAAASRNAQVEAVRNYPDLAALLAA CEECCEEEEEEEEECCCHHHCCCCCEEECCCCEEEEEECCCCCEEEEECCCCHHHHHHHC EPGLHAVSLCAPPQVRYEQARAALLAGKHVMLEKPPGAGVSEVEALRALARQHNRTLFAT CCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEE WHSRHASAVEPARAWLAGREVREVQVRWKEDVRRWHPGQQWIWEAGGLGVFDPGINALSI ECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHEEEECCCCEEECCCCHHHHH VTQILPNPVLLRAATLHVPADCATPIAAELDCVDAAGAPVRAEFDWRHGPVEQWEIDVDT HHHHCCCCEEEEEEEEECCCCCCCCCHHCCEEECCCCCCEEEECCCCCCCCCEEEEEEEC ADGRLSIAEGGKRLTIAGEAVALDAEREYASLYERFHWLIGHGTDDVDVSPLRLVADAFM CCCEEEECCCCCEEEEECCEEEECCHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHH LGKHVEVEPFGH HCCCEEECCCCC >Mature Secondary Structure TINTTTYTLGIVGVGKIARDQHLPAIATNPGFQLVAAASRNAQVEAVRNYPDLAALLAA EECCEEEEEEEEECCCHHHCCCCCEEECCCCEEEEEECCCCCEEEEECCCCHHHHHHHC EPGLHAVSLCAPPQVRYEQARAALLAGKHVMLEKPPGAGVSEVEALRALARQHNRTLFAT CCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEE WHSRHASAVEPARAWLAGREVREVQVRWKEDVRRWHPGQQWIWEAGGLGVFDPGINALSI ECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHEEEECCCCEEECCCCHHHHH VTQILPNPVLLRAATLHVPADCATPIAAELDCVDAAGAPVRAEFDWRHGPVEQWEIDVDT HHHHCCCCEEEEEEEEECCCCCCCCCHHCCEEECCCCCCEEEECCCCCCCCCEEEEEEEC ADGRLSIAEGGKRLTIAGEAVALDAEREYASLYERFHWLIGHGTDDVDVSPLRLVADAFM CCCEEEECCCCCEEEEECCEEEECCHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHH LGKHVEVEPFGH HCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2503815 [H]