Click here to switch to the map view.

The map label for this gene is dapA [H]

Identifier: 238027389

GI number: 238027389

Start: 1960474

End: 1961403

Strand: Reverse

Name: dapA [H]

Synonym: bglu_1g17850

Alternate gene names: 238027389

Gene position: 1961403-1960474 (Counterclockwise)

Preceding gene: 238027390

Following gene: 238027388

Centisome position: 50.21

GC content: 71.08

Gene sequence:

>930_bases
ATGAATACGAGTCGCTCCCCCCGCTACCGCGGCGTTTTCCCCGTCGTGCCGACCACCTTCACCGAGACCGGCGAGCTGGA
TCTGGCGAGCCAGAAGCGCGCCGTCGATTTCATGATCGACGCCGGCTCGGACGGCCTGTGCATCCTCGCGAACTTCTCCG
AGCAGTTCTCGCTCGCTGACGACGAGCGCGAGCTGATCACGCGCACCGTGCTCGAGCACGTGGCCGGCCGCGTGCCGGTG
ATCGTCACCACCACCCACTACGGCACCGGCATCTGCGCGGCGCGCAGCCGGCGCGCGCAGGAGCAGGGCGCGGCCATGGT
GATGATCATGCCGCCCTACCACGGCGCGACGTTCCGCGTGCCGGAGCCGGCGATCCAGGAGTTCTACGCGCGCGTGTCGG
ACGCGATCGACATCCCGATCATGATCCAGGACGCGCCCGCGAGCGGCACGGTGCTGTCCGCGCCGTTCCTCGCGAAGCTC
GCGCGCGAGGTCGAGCAGGTGGCCTACTTCAAGATCGAGACGCCGGGCGCGGCCAACAAGCTGCGCGAGCTGATCCGGCT
GGGCGGCGATGCCGTGGAAGGGCCGTGGGACGGCGAGGAGGCGATCACGCTGCTGGCCGACCTGAACGCCGGCGCGACCG
GCGCGATGACGGGCGGCGGCTATCCGGACGGCATCCGGCCGATCCTGGCGGCGCATCGCGAGGGCCGCGCCGACGACGCC
TACGCGCTGTACCAGCAGTGGCTGCCGCTCATCAACCACGAGAACCGCCAGGCCGGCCTGCTGGCCTGCAAGGCGCTGAT
GAAGGAGGGCGGCGTGATCGACTGCGAGCTGCCGCGCCATCCGCTGCCGGCCATCCATCCGGACACGCGCGCCGAGCTGC
TCGCGATCGCGCGCCGGCTCGACCCGCTCGTGCTGCGCTGGGGCAAGTGA

Upstream 100 bases:

>100_bases
CGCCGCGCGACGAGCGCGACGGCGCGCTCGCGCGCCAGCCGTGACGCCGCTTCCGCATGATCCGTTTATCGACGCTATCC
AGGCAGGACCGAAGGACACC

Downstream 100 bases:

>100_bases
GATCCACGGACCATGACCATCAACACGACTACCTATACCCTCGGCATCGTCGGCGTCGGCAAGATCGCGCGCGACCAGCA
CCTGCCCGCCATCGCCACCA

Product: dihydrodipicolinate synthase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MNTSRSPRYRGVFPVVPTTFTETGELDLASQKRAVDFMIDAGSDGLCILANFSEQFSLADDERELITRTVLEHVAGRVPV
IVTTTHYGTGICAARSRRAQEQGAAMVMIMPPYHGATFRVPEPAIQEFYARVSDAIDIPIMIQDAPASGTVLSAPFLAKL
AREVEQVAYFKIETPGAANKLRELIRLGGDAVEGPWDGEEAITLLADLNAGATGAMTGGGYPDGIRPILAAHREGRADDA
YALYQQWLPLINHENRQAGLLACKALMKEGGVIDCELPRHPLPAIHPDTRAELLAIARRLDPLVLRWGK

Sequences:

>Translated_309_residues
MNTSRSPRYRGVFPVVPTTFTETGELDLASQKRAVDFMIDAGSDGLCILANFSEQFSLADDERELITRTVLEHVAGRVPV
IVTTTHYGTGICAARSRRAQEQGAAMVMIMPPYHGATFRVPEPAIQEFYARVSDAIDIPIMIQDAPASGTVLSAPFLAKL
AREVEQVAYFKIETPGAANKLRELIRLGGDAVEGPWDGEEAITLLADLNAGATGAMTGGGYPDGIRPILAAHREGRADDA
YALYQQWLPLINHENRQAGLLACKALMKEGGVIDCELPRHPLPAIHPDTRAELLAIARRLDPLVLRWGK
>Mature_309_residues
MNTSRSPRYRGVFPVVPTTFTETGELDLASQKRAVDFMIDAGSDGLCILANFSEQFSLADDERELITRTVLEHVAGRVPV
IVTTTHYGTGICAARSRRAQEQGAAMVMIMPPYHGATFRVPEPAIQEFYARVSDAIDIPIMIQDAPASGTVLSAPFLAKL
AREVEQVAYFKIETPGAANKLRELIRLGGDAVEGPWDGEEAITLLADLNAGATGAMTGGGYPDGIRPILAAHREGRADDA
YALYQQWLPLINHENRQAGLLACKALMKEGGVIDCELPRHPLPAIHPDTRAELLAIARRLDPLVLRWGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI1786463, Length=259, Percent_Identity=29.7297297297297, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI87082415, Length=251, Percent_Identity=25.0996015936255, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 33594; Mature: 33594

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSRSPRYRGVFPVVPTTFTETGELDLASQKRAVDFMIDAGSDGLCILANFSEQFSLAD
CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCEEEEECCCCCCCCCC
DERELITRTVLEHVAGRVPVIVTTTHYGTGICAARSRRAQEQGAAMVMIMPPYHGATFRV
HHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEC
PEPAIQEFYARVSDAIDIPIMIQDAPASGTVLSAPFLAKLAREVEQVAYFKIETPGAANK
CCHHHHHHHHHHHCCCCCEEEEECCCCCCCEECCHHHHHHHHHHHHHHEEEEECCCHHHH
LRELIRLGGDAVEGPWDGEEAITLLADLNAGATGAMTGGGYPDGIRPILAAHREGRADDA
HHHHHHHCCCCCCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHH
YALYQQWLPLINHENRQAGLLACKALMKEGGVIDCELPRHPLPAIHPDTRAELLAIARRL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHC
DPLVLRWGK
CHHEEECCC
>Mature Secondary Structure
MNTSRSPRYRGVFPVVPTTFTETGELDLASQKRAVDFMIDAGSDGLCILANFSEQFSLAD
CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCEEEEECCCCCCCCCC
DERELITRTVLEHVAGRVPVIVTTTHYGTGICAARSRRAQEQGAAMVMIMPPYHGATFRV
HHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEC
PEPAIQEFYARVSDAIDIPIMIQDAPASGTVLSAPFLAKLAREVEQVAYFKIETPGAANK
CCHHHHHHHHHHHCCCCCEEEEECCCCCCCEECCHHHHHHHHHHHHHHEEEEECCCHHHH
LRELIRLGGDAVEGPWDGEEAITLLADLNAGATGAMTGGGYPDGIRPILAAHREGRADDA
HHHHHHHCCCCCCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHH
YALYQQWLPLINHENRQAGLLACKALMKEGGVIDCELPRHPLPAIHPDTRAELLAIARRL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHC
DPLVLRWGK
CHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA