Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is yurO [H]

Identifier: 238027374

GI number: 238027374

Start: 1942662

End: 1943915

Strand: Direct

Name: yurO [H]

Synonym: bglu_1g17690

Alternate gene names: 238027374

Gene position: 1942662-1943915 (Clockwise)

Preceding gene: 238027373

Following gene: 238027375

Centisome position: 49.73

GC content: 66.91

Gene sequence:

>1254_bases
ATGAACCTTCAACCCCGCTTCCGGCGCGGCCTCGCCGCGCTCGCCGTGGCCGCGCTGACCGGCCTGTCGGCGTCGGCCGC
GCTGGCCGGCACGCTGAGCGTCAACATCGCGTACAAGGGCGCGAGCCAGCGTGCGGTGTGGACCCAGGTGGTGGACCAGT
TCAAGCAATCGCACCCCGGCACCGACGTCAAGCTCGCGTTCGTCGACGAGGAAGCCTACAAGGTGCAGTTGCCGAACTGG
CTGACCACGGCGCCGCCCGACATCATCAACTGGCACGACGGCGAGCGCATGGCCTACTACGCCAAGCGCGGGCTGTTCGA
GGACCTGTCCGCCGACTGGCAGAAGAACCACTGGGACACGATGTACGCCTCGACGAAGGAGGCCTCGTCGTACCAGGGCA
AGCCCTATGCGGCGCCCACCGTCTACTACGCGTGGGGGATGTTCTATCGCAAGAACCTGTTCAAGAAGGTCGGCATCACC
GCCGAGCCGACCACCTGGGCCGAGTTCCTCGACGACTGCAAGAAGCTCAAGGCCGCCGGCATCACGCCGATCGCGGTGGG
CGGCCGCGATGCGTGGACCCTGGCCGGCTGGTTCGACTACCTGGACCTGCGCCTGAACGGCAACGCGTTCCACCAGCAGC
TGATGGCCGGCCAGATCCCCTACACCGACGCGCGCGTGAAGAAGGTCTACACCACCTGGAAGCAGCTGATCGACGCGGGC
TACTTCATCGACAACGCGCTGTCCTACGATCTCGACGCGGCGCAGCCGTTCCTGTTCCAGGACAAGGCCGCGATGATGCT
GATGGGCACCTTCATCACCGGCGGCTTCACGCCGGCGGTGCGGCAGGACATGGGCTTCTTCCGCTTCCCGGTGATCGACG
CGAACGTGCCGATCGCCGAGGACGGCCCGGTGGAATCGCTGCACATCCCCGCCAAGGCCAAGAACAAGGCGGACGCGCAT
GCGTTCCTCGCGTTCGTCGAGACGCCGGCCATCGGCGCGCAGCTGGCCAAGGGGCTCGGCTCGCTGTCGGCCAACAGCCG
CTCGCCGGAGCCCGACGACGCGATCTCGAGGATTGCCTTCCACCTGCTGGCCGACACCAAGGGCGGCATCGCGCAGTTCT
ACGATCGCGACATGACCAAGGAAATGGCCGACGAGGGCATGAAGGGCATGCAGCAGTTCCTCGCCGATCCGGGCAAGCTC
GACGCGGTGCTCGCGCAGCTCGAGGCCGCGCGCCAGCGCATCTACCGGAAGTGA

Upstream 100 bases:

>100_bases
CGCACCGCGGCCGGCTGAGCCCGCGCGGCGCGTTCGCGGGCAGATTTCGTTGTTTCGCCATTCCGCAGTTCCGACAACAA
CCGCAACCAGGAGACAGCAG

Downstream 100 bases:

>100_bases
TGCGGGAACCGAACCCGCAGTGAACTGGAAGCGAGCGGGGCCGGCGGCGGCACCGGGCGGGCCGCAGGCCGCCCGTGCCG
CCGCCCCCCGCGACCATCAA

Product: family 1 extracellular solute-binding protein

Products: ADP; phosphate; maltose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MNLQPRFRRGLAALAVAALTGLSASAALAGTLSVNIAYKGASQRAVWTQVVDQFKQSHPGTDVKLAFVDEEAYKVQLPNW
LTTAPPDIINWHDGERMAYYAKRGLFEDLSADWQKNHWDTMYASTKEASSYQGKPYAAPTVYYAWGMFYRKNLFKKVGIT
AEPTTWAEFLDDCKKLKAAGITPIAVGGRDAWTLAGWFDYLDLRLNGNAFHQQLMAGQIPYTDARVKKVYTTWKQLIDAG
YFIDNALSYDLDAAQPFLFQDKAAMMLMGTFITGGFTPAVRQDMGFFRFPVIDANVPIAEDGPVESLHIPAKAKNKADAH
AFLAFVETPAIGAQLAKGLGSLSANSRSPEPDDAISRIAFHLLADTKGGIAQFYDRDMTKEMADEGMKGMQQFLADPGKL
DAVLAQLEAARQRIYRK

Sequences:

>Translated_417_residues
MNLQPRFRRGLAALAVAALTGLSASAALAGTLSVNIAYKGASQRAVWTQVVDQFKQSHPGTDVKLAFVDEEAYKVQLPNW
LTTAPPDIINWHDGERMAYYAKRGLFEDLSADWQKNHWDTMYASTKEASSYQGKPYAAPTVYYAWGMFYRKNLFKKVGIT
AEPTTWAEFLDDCKKLKAAGITPIAVGGRDAWTLAGWFDYLDLRLNGNAFHQQLMAGQIPYTDARVKKVYTTWKQLIDAG
YFIDNALSYDLDAAQPFLFQDKAAMMLMGTFITGGFTPAVRQDMGFFRFPVIDANVPIAEDGPVESLHIPAKAKNKADAH
AFLAFVETPAIGAQLAKGLGSLSANSRSPEPDDAISRIAFHLLADTKGGIAQFYDRDMTKEMADEGMKGMQQFLADPGKL
DAVLAQLEAARQRIYRK
>Mature_417_residues
MNLQPRFRRGLAALAVAALTGLSASAALAGTLSVNIAYKGASQRAVWTQVVDQFKQSHPGTDVKLAFVDEEAYKVQLPNW
LTTAPPDIINWHDGERMAYYAKRGLFEDLSADWQKNHWDTMYASTKEASSYQGKPYAAPTVYYAWGMFYRKNLFKKVGIT
AEPTTWAEFLDDCKKLKAAGITPIAVGGRDAWTLAGWFDYLDLRLNGNAFHQQLMAGQIPYTDARVKKVYTTWKQLIDAG
YFIDNALSYDLDAAQPFLFQDKAAMMLMGTFITGGFTPAVRQDMGFFRFPVIDANVPIAEDGPVESLHIPAKAKNKADAH
AFLAFVETPAIGAQLAKGLGSLSANSRSPEPDDAISRIAFHLLADTKGGIAQFYDRDMTKEMADEGMKGMQQFLADPGKL
DAVLAQLEAARQRIYRK

Specific function: Probably part of the binding-protein-dependent transport system yurMNO [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46142; Mature: 46142

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLQPRFRRGLAALAVAALTGLSASAALAGTLSVNIAYKGASQRAVWTQVVDQFKQSHPG
CCCCHHHHHHHHHHHHHHHHCCCHHHHEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCC
TDVKLAFVDEEAYKVQLPNWLTTAPPDIINWHDGERMAYYAKRGLFEDLSADWQKNHWDT
CCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCHHCCCCHH
MYASTKEASSYQGKPYAAPTVYYAWGMFYRKNLFKKVGITAEPTTWAEFLDDCKKLKAAG
HHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
ITPIAVGGRDAWTLAGWFDYLDLRLNGNAFHQQLMAGQIPYTDARVKKVYTTWKQLIDAG
CCEEEECCCCCEEHHHHEEEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
YFIDNALSYDLDAAQPFLFQDKAAMMLMGTFITGGFTPAVRQDMGFFRFPVIDANVPIAE
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCEECEEEECCCCCCC
DGPVESLHIPAKAKNKADAHAFLAFVETPAIGAQLAKGLGSLSANSRSPEPDDAISRIAF
CCCCCEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
HLLADTKGGIAQFYDRDMTKEMADEGMKGMQQFLADPGKLDAVLAQLEAARQRIYRK
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLQPRFRRGLAALAVAALTGLSASAALAGTLSVNIAYKGASQRAVWTQVVDQFKQSHPG
CCCCHHHHHHHHHHHHHHHHCCCHHHHEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCC
TDVKLAFVDEEAYKVQLPNWLTTAPPDIINWHDGERMAYYAKRGLFEDLSADWQKNHWDT
CCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCHHCCCCHH
MYASTKEASSYQGKPYAAPTVYYAWGMFYRKNLFKKVGITAEPTTWAEFLDDCKKLKAAG
HHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
ITPIAVGGRDAWTLAGWFDYLDLRLNGNAFHQQLMAGQIPYTDARVKKVYTTWKQLIDAG
CCEEEECCCCCEEHHHHEEEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
YFIDNALSYDLDAAQPFLFQDKAAMMLMGTFITGGFTPAVRQDMGFFRFPVIDANVPIAE
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCEECEEEECCCCCCC
DGPVESLHIPAKAKNKADAHAFLAFVETPAIGAQLAKGLGSLSANSRSPEPDDAISRIAF
CCCCCEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
HLLADTKGGIAQFYDRDMTKEMADEGMKGMQQFLADPGKLDAVLAQLEAARQRIYRK
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; maltose [Periplasm]; H2O [C]

Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]