Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is phnA [H]

Identifier: 238027368

GI number: 238027368

Start: 1936545

End: 1936889

Strand: Direct

Name: phnA [H]

Synonym: bglu_1g17630

Alternate gene names: 238027368

Gene position: 1936545-1936889 (Clockwise)

Preceding gene: 238027366

Following gene: 238027369

Centisome position: 49.57

GC content: 67.25

Gene sequence:

>345_bases
ATGTCAGCCCTGCCCGCATGCCCGCAATGCTCGATGAACAACACCTATCCCGACGGCGGCCTCGTCGTCTGCGCGGATTG
CGGTCACGAGTGGTCGCCCGGCGCCGGCGCCGACGAGCCGGCGCCGGTTGCCGATGAGCTGGTGCGGGACGCGCACGGCA
GCGTGCTCGCGAACGGTGACTCGGTGGTGCTGATCAAGGACCTGCGGGTCAAGGGCTCGTCGATCACGCTGAAGGTCGGC
ACCCGGATCAAGGGCATCCGGCTCGCCAGCGGCGATCACGAAGTGGACTGCCGCACCGATGCCGGCAGTTTCATGTTGAA
GGCGTGCTATCTGCGCAAGGCCTGA

Upstream 100 bases:

>100_bases
TCCCGCCATCATCATAACATGTGCCTTGTATTATAATGTTATGCACATTCAAGCCGTGGCCGCCCGCGCGGCCGCCCCGC
CACCCCTCGATGGACCCGCC

Downstream 100 bases:

>100_bases
CGCGAATCCTGTGGGGTAGAGGCGCTGATGGATCGGGACCGGACGGCGTGGGATGCGTTCGTGGCAGTGTTCGCCGCGTC
GCTGGGCGGCAACCAGCCGA

Product: Alkylphosphonate utilization operon protein PhnA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSALPACPQCSMNNTYPDGGLVVCADCGHEWSPGAGADEPAPVADELVRDAHGSVLANGDSVVLIKDLRVKGSSITLKVG
TRIKGIRLASGDHEVDCRTDAGSFMLKACYLRKA

Sequences:

>Translated_114_residues
MSALPACPQCSMNNTYPDGGLVVCADCGHEWSPGAGADEPAPVADELVRDAHGSVLANGDSVVLIKDLRVKGSSITLKVG
TRIKGIRLASGDHEVDCRTDAGSFMLKACYLRKA
>Mature_113_residues
SALPACPQCSMNNTYPDGGLVVCADCGHEWSPGAGADEPAPVADELVRDAHGSVLANGDSVVLIKDLRVKGSSITLKVGT
RIKGIRLASGDHEVDCRTDAGSFMLKACYLRKA

Specific function: Unknown

COG id: COG2824

COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790547, Length=113, Percent_Identity=49.5575221238938, Blast_Score=118, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004624
- InterPro:   IPR013988
- InterPro:   IPR013987 [H]

Pfam domain/function: PF03831 PhnA; PF08274 PhnA_Zn_Ribbon [H]

EC number: NA

Molecular weight: Translated: 11901; Mature: 11769

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALPACPQCSMNNTYPDGGLVVCADCGHEWSPGAGADEPAPVADELVRDAHGSVLANGD
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCC
SVVLIKDLRVKGSSITLKVGTRIKGIRLASGDHEVDCRTDAGSFMLKACYLRKA
CEEEEEECEECCCEEEEEECCEEEEEEEECCCCCEEEECCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SALPACPQCSMNNTYPDGGLVVCADCGHEWSPGAGADEPAPVADELVRDAHGSVLANGD
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCC
SVVLIKDLRVKGSSITLKVGTRIKGIRLASGDHEVDCRTDAGSFMLKACYLRKA
CEEEEEECEECCCEEEEEECCEEEEEEEECCCCCEEEECCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]