Click here to switch to the map view.

The map label for this gene is speE [H]

Identifier: 238027369

GI number: 238027369

Start: 1936917

End: 1937753

Strand: Direct

Name: speE [H]

Synonym: bglu_1g17640

Alternate gene names: 238027369

Gene position: 1936917-1937753 (Clockwise)

Preceding gene: 238027368

Following gene: 238027372

Centisome position: 49.58

GC content: 69.65

Gene sequence:

>837_bases
ATGGATCGGGACCGGACGGCGTGGGATGCGTTCGTGGCAGTGTTCGCCGCGTCGCTGGGCGGCAACCAGCCGATCGTGCT
GGAGACGCGGCGCACGGTGTCGCTGCACTTCGATCTGTCGGCGACGCAAAGCTTCATGTCGCTGGCCGAACCCGAGCGGC
TGGTGCTCGAATACACGCGCATCATGATGGGCTTCGTGCTGCTCGCGCCCGCGCCGGCGCGGGTCCTGATGATCGGGCTC
GGCGGCGGTTCGCTGGCCAAGTACTGCCATCGGCACCTGCCCGCCACCACGATCACGGCCGTCGAGATCGACCCCGGCGT
GATCGCGCTGCGCGATCGCTTCCACCTGCCCGCCGACGGCGACCGCTTCGAGGTGATCTGCGCGGACGGCGCGCACTACA
TGGACCGCCCCGAGGTGTCGGCGGACGTGATCCTGCTCGACGCCTTCGAGGCCCAAGGCATATCGGCCCAATGCGCGAGC
CAGTCCTTCCTGGCAGCGTGCCGCGAGCGGCTGCGCGGCAACGGCGTCCTGGTGGCGAATTTCGTCGATGACGATCCGGC
GTTGCCGGTTTATCTCGCGCGGGTGGAGGCCGTGTTCGGCATGGCGCGCGCGGTCCTGATGACGAGCAATGCGGGAAATT
GCATCGTGTTCGCGTGGAACGGCGCGAGCGCCCTGCCGTGCGCCGCCGTGCTGGCCAAACGCGCCGGTGGCTTCGATTTC
TCGGCGGCGCTCGGCCTGCACGACCTGGCCGTGCGGCTCGAGCGCGGCCGGCGCTTCGAGATCGGACGGCTGGCCTGGAG
CGAGTGCGGCCGGCCCCGCTGGGCGATCAAGGAATGA

Upstream 100 bases:

>100_bases
CGATCACGAAGTGGACTGCCGCACCGATGCCGGCAGTTTCATGTTGAAGGCGTGCTATCTGCGCAAGGCCTGACGCGAAT
CCTGTGGGGTAGAGGCGCTG

Downstream 100 bases:

>100_bases
CGCGGCAGCCGCGCTTGTTTGCTGCTTACTTGCCGCGTCGCGCGCCGCGCCCGACGGCCGTGCTCGCGGTGCCGTACTCC
ACGTTGTGCTGGGCCAGATA

Product: Spermidine synthase-like protein

Products: NA

Alternate protein names: Putrescine aminopropyltransferase; PAPT; SPDSY [H]

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MDRDRTAWDAFVAVFAASLGGNQPIVLETRRTVSLHFDLSATQSFMSLAEPERLVLEYTRIMMGFVLLAPAPARVLMIGL
GGGSLAKYCHRHLPATTITAVEIDPGVIALRDRFHLPADGDRFEVICADGAHYMDRPEVSADVILLDAFEAQGISAQCAS
QSFLAACRERLRGNGVLVANFVDDDPALPVYLARVEAVFGMARAVLMTSNAGNCIVFAWNGASALPCAAVLAKRAGGFDF
SAALGLHDLAVRLERGRRFEIGRLAWSECGRPRWAIKE

Sequences:

>Translated_278_residues
MDRDRTAWDAFVAVFAASLGGNQPIVLETRRTVSLHFDLSATQSFMSLAEPERLVLEYTRIMMGFVLLAPAPARVLMIGL
GGGSLAKYCHRHLPATTITAVEIDPGVIALRDRFHLPADGDRFEVICADGAHYMDRPEVSADVILLDAFEAQGISAQCAS
QSFLAACRERLRGNGVLVANFVDDDPALPVYLARVEAVFGMARAVLMTSNAGNCIVFAWNGASALPCAAVLAKRAGGFDF
SAALGLHDLAVRLERGRRFEIGRLAWSECGRPRWAIKE
>Mature_278_residues
MDRDRTAWDAFVAVFAASLGGNQPIVLETRRTVSLHFDLSATQSFMSLAEPERLVLEYTRIMMGFVLLAPAPARVLMIGL
GGGSLAKYCHRHLPATTITAVEIDPGVIALRDRFHLPADGDRFEVICADGAHYMDRPEVSADVILLDAFEAQGISAQCAS
QSFLAACRERLRGNGVLVANFVDDDPALPVYLARVEAVFGMARAVLMTSNAGNCIVFAWNGASALPCAAVLAKRAGGFDF
SAALGLHDLAVRLERGRRFEIGRLAWSECGRPRWAIKE

Specific function: Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor [H]

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spermidine/spermine synthase family [H]

Homologues:

Organism=Escherichia coli, GI1786312, Length=181, Percent_Identity=29.2817679558011, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001045 [H]

Pfam domain/function: PF01564 Spermine_synth [H]

EC number: =2.5.1.16 [H]

Molecular weight: Translated: 30136; Mature: 30136

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRDRTAWDAFVAVFAASLGGNQPIVLETRRTVSLHFDLSATQSFMSLAEPERLVLEYTR
CCCCHHHHHHHHHHHHHHCCCCCCEEEEECEEEEEEEEHHHHHHHHHHCCHHHHHHHHHH
IMMGFVLLAPAPARVLMIGLGGGSLAKYCHRHLPATTITAVEIDPGVIALRDRFHLPADG
HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCC
DRFEVICADGAHYMDRPEVSADVILLDAFEAQGISAQCASQSFLAACRERLRGNGVLVAN
CEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
FVDDDPALPVYLARVEAVFGMARAVLMTSNAGNCIVFAWNGASALPCAAVLAKRAGGFDF
ECCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCCH
SAALGLHDLAVRLERGRRFEIGRLAWSECGRPRWAIKE
HHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDRDRTAWDAFVAVFAASLGGNQPIVLETRRTVSLHFDLSATQSFMSLAEPERLVLEYTR
CCCCHHHHHHHHHHHHHHCCCCCCEEEEECEEEEEEEEHHHHHHHHHHCCHHHHHHHHHH
IMMGFVLLAPAPARVLMIGLGGGSLAKYCHRHLPATTITAVEIDPGVIALRDRFHLPADG
HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCC
DRFEVICADGAHYMDRPEVSADVILLDAFEAQGISAQCASQSFLAACRERLRGNGVLVAN
CEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
FVDDDPALPVYLARVEAVFGMARAVLMTSNAGNCIVFAWNGASALPCAAVLAKRAGGFDF
ECCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCCH
SAALGLHDLAVRLERGRRFEIGRLAWSECGRPRWAIKE
HHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]