| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027363
Identifier: 238027363
GI number: 238027363
Start: 1928962
End: 1929489
Strand: Reverse
Name: 238027363
Synonym: bglu_1g17530
Alternate gene names: NA
Gene position: 1929489-1928962 (Counterclockwise)
Preceding gene: 238027364
Following gene: 238027362
Centisome position: 49.39
GC content: 68.56
Gene sequence:
>528_bases ATGAATGCCGCCGAGTGCCGTCACGGCGCGCTAGCCGATTTTCTCGCGCTGACCGACGGCCTGTCCATCGCTCGAATCGC GCAAACGCTCCGCTGCTGCACCCGTACCGTCCGGAACTACGTCGCCGGTCGCTCGCCGATCCCGTGGCACCGCATCGAAG TCCTGCGCCTGTTGGCCCTCGAATCCAACCGCGACGCACACGCCGCAACGGCGCCCGGCGAGCGCGTCGACGCGCCATCG CCAGTTCGCGCGAACATCGAACCGGACCCGGCCGCCCCGGACGTGCCGCCCGATGAAATGCTGGCATGGGTCGGCGTTCA CGCGCCGCACTACCTGTCGAGCCAACGCAGCCTGACGCACTACATTCGCGGATGGAACGTCGTCGACAAAATCCACCGAG CCAAGAGCGAAGGCACGTTCGCGGCCGTGCTCGCCAAGTGGCGCACGCTCGCGCTGGATCTGCCCCGCTCGTGGCGGTCC GGCCCCCTTTGGACCGGCGTCGGGCCGCCAGCCTACGTTCCCCCATAA
Upstream 100 bases:
>100_bases AGTATGGTCGCTAGCAAAACCGGTACTTCTGTCAGGTTGAAGGAAACTGTTTGTAAACATACTTACAGTCGCTTACGCAG TTTCGCTTCCCGCAACGCCT
Downstream 100 bases:
>100_bases ACGGCGACCAAGGGGCTACGTCGGCATGGCGCCCCGATTTCTTGACGTTGACATCGGCCGATACGCTCGAAATACTGTAC ATCCATACAGTATTTGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MNAAECRHGALADFLALTDGLSIARIAQTLRCCTRTVRNYVAGRSPIPWHRIEVLRLLALESNRDAHAATAPGERVDAPS PVRANIEPDPAAPDVPPDEMLAWVGVHAPHYLSSQRSLTHYIRGWNVVDKIHRAKSEGTFAAVLAKWRTLALDLPRSWRS GPLWTGVGPPAYVPP
Sequences:
>Translated_175_residues MNAAECRHGALADFLALTDGLSIARIAQTLRCCTRTVRNYVAGRSPIPWHRIEVLRLLALESNRDAHAATAPGERVDAPS PVRANIEPDPAAPDVPPDEMLAWVGVHAPHYLSSQRSLTHYIRGWNVVDKIHRAKSEGTFAAVLAKWRTLALDLPRSWRS GPLWTGVGPPAYVPP >Mature_175_residues MNAAECRHGALADFLALTDGLSIARIAQTLRCCTRTVRNYVAGRSPIPWHRIEVLRLLALESNRDAHAATAPGERVDAPS PVRANIEPDPAAPDVPPDEMLAWVGVHAPHYLSSQRSLTHYIRGWNVVDKIHRAKSEGTFAAVLAKWRTLALDLPRSWRS GPLWTGVGPPAYVPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19204; Mature: 19204
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAAECRHGALADFLALTDGLSIARIAQTLRCCTRTVRNYVAGRSPIPWHRIEVLRLLAL CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH ESNRDAHAATAPGERVDAPSPVRANIEPDPAAPDVPPDEMLAWVGVHAPHYLSSQRSLTH HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH YIRGWNVVDKIHRAKSEGTFAAVLAKWRTLALDLPRSWRSGPLWTGVGPPAYVPP HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCC >Mature Secondary Structure MNAAECRHGALADFLALTDGLSIARIAQTLRCCTRTVRNYVAGRSPIPWHRIEVLRLLAL CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH ESNRDAHAATAPGERVDAPSPVRANIEPDPAAPDVPPDEMLAWVGVHAPHYLSSQRSLTH HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH YIRGWNVVDKIHRAKSEGTFAAVLAKWRTLALDLPRSWRSGPLWTGVGPPAYVPP HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA