| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027362
Identifier: 238027362
GI number: 238027362
Start: 1927881
End: 1928435
Strand: Reverse
Name: 238027362
Synonym: bglu_1g17520
Alternate gene names: NA
Gene position: 1928435-1927881 (Counterclockwise)
Preceding gene: 238027363
Following gene: 238027361
Centisome position: 49.36
GC content: 63.6
Gene sequence:
>555_bases ATGTTGCGAAAAATCGCAGTCGTCGGGGATACGTTGTCGAGCGGCGGTAACGTCCTACCGCACGGCGGACCACCCATCAC CATGAACGGGCATCAGGTCGCCTTGATCGGCGGCCCGGCCTTCTGCGCCGTCTGCAAGGCGCCGGGCGTCATCGCGAAAT CTGGCGGGCCGTACCGCATGAGCATGTCGGGCGAGGCGGCGCTCGATCAGGACATCGTGCTATGCGGATGCCCTAAGCCA CCCAAAATCGTTGCCGGACTCTGCGGCGAAGCATGGTGCGACGACATGATCGAGGGGCACGGCAAGGTGATATCGAGCCT GACCGCCACGGGCGGCGTTGCATCGGTCAAGAAAGGCGCGTTCGATGAGCAGGTGAAGGCGACCGAGCATCAGGTCGAAG GCTTGCCGTACTACATTGAAACCGCCGACGGCCGCGTGCATTTCGGCCGCCTGGACGCGAGCGGGACATTGCCGCGTGTC TACACCGGAGACGATCCGGGCTCCTATACCGTTCATTGGGGCGACGACGCGCTCGCCATGCAACACGGGGAATGA
Upstream 100 bases:
>100_bases GCCCCATCCGCGTTGGTAGAATCGCGTCGAATCATCCGAACAAACTGAGAGAGGCCGAGGCGCAACGCGCCGGGGTCGCG AATTTCGAGGGGCTACACGC
Downstream 100 bases:
>100_bases TCGATGCCGCACACGAAACCGACCAAGATCGACACGAACACACAAACGGGCTCGCAAAAAGAAGTCCCCGTGAAGGCGAT CACATTCAAAGAACTTTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MLRKIAVVGDTLSSGGNVLPHGGPPITMNGHQVALIGGPAFCAVCKAPGVIAKSGGPYRMSMSGEAALDQDIVLCGCPKP PKIVAGLCGEAWCDDMIEGHGKVISSLTATGGVASVKKGAFDEQVKATEHQVEGLPYYIETADGRVHFGRLDASGTLPRV YTGDDPGSYTVHWGDDALAMQHGE
Sequences:
>Translated_184_residues MLRKIAVVGDTLSSGGNVLPHGGPPITMNGHQVALIGGPAFCAVCKAPGVIAKSGGPYRMSMSGEAALDQDIVLCGCPKP PKIVAGLCGEAWCDDMIEGHGKVISSLTATGGVASVKKGAFDEQVKATEHQVEGLPYYIETADGRVHFGRLDASGTLPRV YTGDDPGSYTVHWGDDALAMQHGE >Mature_184_residues MLRKIAVVGDTLSSGGNVLPHGGPPITMNGHQVALIGGPAFCAVCKAPGVIAKSGGPYRMSMSGEAALDQDIVLCGCPKP PKIVAGLCGEAWCDDMIEGHGKVISSLTATGGVASVKKGAFDEQVKATEHQVEGLPYYIETADGRVHFGRLDASGTLPRV YTGDDPGSYTVHWGDDALAMQHGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19017; Mature: 19017
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKIAVVGDTLSSGGNVLPHGGPPITMNGHQVALIGGPAFCAVCKAPGVIAKSGGPYRM CCEEEEEECCCCCCCCCCCCCCCCEEEECCCEEEEEECCCEEEECCCCCEEEECCCCEEE SMSGEAALDQDIVLCGCPKPPKIVAGLCGEAWCDDMIEGHGKVISSLTATGGVASVKKGA ECCCCCCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHCCC FDEQVKATEHQVEGLPYYIETADGRVHFGRLDASGTLPRVYTGDDPGSYTVHWGDDALAM CCHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCEEEECCCCCCEEEEECCCEEEE QHGE ECCC >Mature Secondary Structure MLRKIAVVGDTLSSGGNVLPHGGPPITMNGHQVALIGGPAFCAVCKAPGVIAKSGGPYRM CCEEEEEECCCCCCCCCCCCCCCCEEEECCCEEEEEECCCEEEECCCCCEEEECCCCEEE SMSGEAALDQDIVLCGCPKPPKIVAGLCGEAWCDDMIEGHGKVISSLTATGGVASVKKGA ECCCCCCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHCCC FDEQVKATEHQVEGLPYYIETADGRVHFGRLDASGTLPRVYTGDDPGSYTVHWGDDALAM CCHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCEEEECCCCCCEEEEECCCEEEE QHGE ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA