| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238027352
Identifier: 238027352
GI number: 238027352
Start: 1918567
End: 1918899
Strand: Direct
Name: 238027352
Synonym: bglu_1g17420
Alternate gene names: NA
Gene position: 1918567-1918899 (Clockwise)
Preceding gene: 238027351
Following gene: 238027353
Centisome position: 49.11
GC content: 62.76
Gene sequence:
>333_bases ATGACCCTCAAGAAAACGATCACCGTCGAACTGTCGGGCGCTCCCGCCAGCATTCACCGTATCGACTCGGTGACGATCAA TTACGCGGCCAACAGTACGTCCGCGCAGATGTCGAGTTTCTATGACGATGCGGCACGCCGTGCCAATCGCACGCCGCTCG CAAACTCGATGCTGAGCGTCGAGGGCGTACCGAAGGCCGGGAAAGACCCGAAGGCGTACGTCGAGGCGGCGTTGGTCGCG CCGGTGCCGGAAGGCGAAGACGGCGACGCCACGTTGAAGCAGTACGCGCCGAACCGCTACGCGTTTTCGGGCGCCGAAAT CATCGCCGACTGA
Upstream 100 bases:
>100_bases AGCAGGCCGGGTTCCCTCTGAATGTTGTATGGCCGGTTTTGCCTGTCTGAGCCGGAACGTTGTCGAACCATTTACTGAAC CTTTATCGGAGATTCCAGCA
Downstream 100 bases:
>100_bases CCGCAACCGATGACGCGCAATCCAGATCCGGGCCGCGTCAATCCAATATCAAGGGAGTAGAACAATCATGGCGCAGGACT ATCACCACGGCGTAACCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MTLKKTITVELSGAPASIHRIDSVTINYAANSTSAQMSSFYDDAARRANRTPLANSMLSVEGVPKAGKDPKAYVEAALVA PVPEGEDGDATLKQYAPNRYAFSGAEIIAD
Sequences:
>Translated_110_residues MTLKKTITVELSGAPASIHRIDSVTINYAANSTSAQMSSFYDDAARRANRTPLANSMLSVEGVPKAGKDPKAYVEAALVA PVPEGEDGDATLKQYAPNRYAFSGAEIIAD >Mature_109_residues TLKKTITVELSGAPASIHRIDSVTINYAANSTSAQMSSFYDDAARRANRTPLANSMLSVEGVPKAGKDPKAYVEAALVAP VPEGEDGDATLKQYAPNRYAFSGAEIIAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11619; Mature: 11488
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKKTITVELSGAPASIHRIDSVTINYAANSTSAQMSSFYDDAARRANRTPLANSMLSV CCCCEEEEEEECCCCCCEEEECEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEC EGVPKAGKDPKAYVEAALVAPVPEGEDGDATLKQYAPNRYAFSGAEIIAD CCCCCCCCCHHHHHEEEEECCCCCCCCCCCHHHHCCCCCEEECCEEEECC >Mature Secondary Structure TLKKTITVELSGAPASIHRIDSVTINYAANSTSAQMSSFYDDAARRANRTPLANSMLSV CCCEEEEEEECCCCCCEEEECEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEC EGVPKAGKDPKAYVEAALVAPVPEGEDGDATLKQYAPNRYAFSGAEIIAD CCCCCCCCCHHHHHEEEEECCCCCCCCCCCHHHHCCCCCEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA