| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027351
Identifier: 238027351
GI number: 238027351
Start: 1918091
End: 1918516
Strand: Direct
Name: 238027351
Synonym: bglu_1g17410
Alternate gene names: NA
Gene position: 1918091-1918516 (Clockwise)
Preceding gene: 238027350
Following gene: 238027352
Centisome position: 49.1
GC content: 58.92
Gene sequence:
>426_bases ATGACGAACAAATTCATGCTGCACGTTGAGCAAGCGGCTTTCATTCTGTCGAAGAAATTCCCGCAGCTTGCCCGCTGCAA GGATTACTGGGTCGCGCACCCTGTCGATGAGAAGTCGTACGAGCAAACAAAATCGGCTTGGGTGCCGATCTGGTACCCGC GAGACATTCCGCAGCCGACCCCGGACGATCTGTTGAATTGGTGGCCGGAGTTCGAATCGGAATTCGAACTGATCGACGCC GCCGCGCGTATGCGGAGCGAGCGCGACGCGCTGCTTGCGCAGGTCGATCCGTTAGTCGAACAGGCTGCGGATGCTGGTGA CACCGAGCGCGAAGCGGCACTTCGAAAGTACCGCGCTGCTTTGCGTGACGTGCCGCAGCAGGCCGGGTTCCCTCTGAATG TTGTATGGCCGGTTTTGCCTGTCTGA
Upstream 100 bases:
>100_bases ACGGCGCACTGCCAGCGCCGTGGGTTGTGTGCGGTTTGAGCGGTCCGGGTAACGCGACGGCAAATGCAATCACGGTGTAC GGCGTCGTACTGAGGAACCA
Downstream 100 bases:
>100_bases GCCGGAACGTTGTCGAACCATTTACTGAACCTTTATCGGAGATTCCAGCAATGACCCTCAAGAAAACGATCACCGTCGAA CTGTCGGGCGCTCCCGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MTNKFMLHVEQAAFILSKKFPQLARCKDYWVAHPVDEKSYEQTKSAWVPIWYPRDIPQPTPDDLLNWWPEFESEFELIDA AARMRSERDALLAQVDPLVEQAADAGDTEREAALRKYRAALRDVPQQAGFPLNVVWPVLPV
Sequences:
>Translated_141_residues MTNKFMLHVEQAAFILSKKFPQLARCKDYWVAHPVDEKSYEQTKSAWVPIWYPRDIPQPTPDDLLNWWPEFESEFELIDA AARMRSERDALLAQVDPLVEQAADAGDTEREAALRKYRAALRDVPQQAGFPLNVVWPVLPV >Mature_140_residues TNKFMLHVEQAAFILSKKFPQLARCKDYWVAHPVDEKSYEQTKSAWVPIWYPRDIPQPTPDDLLNWWPEFESEFELIDAA ARMRSERDALLAQVDPLVEQAADAGDTEREAALRKYRAALRDVPQQAGFPLNVVWPVLPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16309; Mature: 16177
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKFMLHVEQAAFILSKKFPQLARCKDYWVAHPVDEKSYEQTKSAWVPIWYPRDIPQPT CCCCEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCCCCCC PDDLLNWWPEFESEFELIDAAARMRSERDALLAQVDPLVEQAADAGDTEREAALRKYRAA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LRDVPQQAGFPLNVVWPVLPV HHHHHHHCCCCEEECCCCCCC >Mature Secondary Structure TNKFMLHVEQAAFILSKKFPQLARCKDYWVAHPVDEKSYEQTKSAWVPIWYPRDIPQPT CCCEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCCCCCC PDDLLNWWPEFESEFELIDAAARMRSERDALLAQVDPLVEQAADAGDTEREAALRKYRAA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LRDVPQQAGFPLNVVWPVLPV HHHHHHHCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA