| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027348
Identifier: 238027348
GI number: 238027348
Start: 1913280
End: 1914188
Strand: Direct
Name: 238027348
Synonym: bglu_1g17380
Alternate gene names: NA
Gene position: 1913280-1914188 (Clockwise)
Preceding gene: 238027347
Following gene: 238027349
Centisome position: 48.98
GC content: 64.36
Gene sequence:
>909_bases ATGAGTACCCCCATCGATCTGTCGCGCCTGCCCGCTCCTGATGTTGTCGAGGAAATCGATTTTGAGGCAATGCTCGCGGA GCGTAAGGCCGGGTTGCTATCGCTCGTACCGGACGACCGTCGCGCGGAAGTGGCGGCAGCGCTCGAACTGGAATCGGAGC CGATCACGATCGTGTTGCAAGAAAGCGTGTATCGCGAAATGTACCTGCGACAACGCGTGAACGACGCAGCACGTGCGGTC ATGCTGGCGTTCGCGATGGATGGCGATCTGGATCAACTGGCCGCGCTGCTCGGCGTCCAGCGTCTCGAAATCACACCCGC AGACCCGGAAACGGGTGCCCCGGCCGTCATGGAAGGCAACAGCGACCTGCGCTATCGCACGCAGTTGGCGCCGCAAGGGT ATTCCGTCGCCGGTCCGGAGGGTGCGTATCGTTCGCACGCGCTCGCGGCTCATGGCTCGGTGCTGGACGCATCGGCGACG AGCCCGGCGCCCGGCGAAGTGCTGGTGACGGTTCTCTCTCGTGACGGCGACGGCACCCCATCGAAAGAGGTGATCGACGC GGTGACGGCGGCCCTTCGCGCCGACGACGTGCGCCCGCTCACCGACAAGGTGACGGTGCGTGGTGCAACGATCATCGGTT ACGAAGTCGATGCGGTGCTGTTCACGTTCCCCGGGCCGGATTCGGGTGTCGTACTGAAAGAGGCTGCCGCGAAGCTCGCG GCCTACGTCGATGAAACCCATCGTATCGGCCGCGAGGTCACGTTGTCCGGCATCTACGCTGCGTTGCATGTGAACGGCGT CGAGCGCGTGAAGCTGAACGCGCCGACCGCTGACGTTGAGATTTCCGCCACGCAGGCGCCGTACTGCCGGGCGGTCAAGA TCACTCCGGGAGGCGTTTATGGCGGGTGA
Upstream 100 bases:
>100_bases TCGCGTCCGGGACGTTGCCCGTCATCGTAGAAGGCTATACGACCGTACGCGGTGGTTCTGTTGACTTCCGCACGTCGGTT TCGGTCGAGGGCATTGGCGC
Downstream 100 bases:
>100_bases TCTGCTGCCGCCGAACGCGTCGCCGCTGCTGCGCGCGATCGCGGCCGCGAATGCGCGGCTTGGTGAGGTGCCGGTGCCGA TTCGCGACCTGATGAACCCG
Product: Baseplate J-like protein
Products: NA
Alternate protein names: Baseplate Assembly Protein J; Baseplate J-Like Protein; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Bacteriophage Baseplate Assembly Protein; Bacteriophage Tail Fiber Protein; Phage Baseplate Assembly Protein J; Pyocin R2_PP Baseplate/Tail Fiber Protein; Bacteriophage Baseplate Assembly Protein J; Phage Baseplate Protein; Phage Baseplate J-Like Protein; Prophage LambdaW5 Baseplate Assembly Protein J; Baseplate Assembly-Like Protein; Phage Baseplate Assembly; Prophage; GPJ Of Phage P2-Like; Phage P2 Baseplate Assembly Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly GpJ-Like Protein; Prophage Baseplate Assembly Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Baseplate Assembly Protein GpJ; Phage Protein Gp; Baseplate Assembly Protein J Prophage; Baseplate Assembly Protein; Baseplate Protein Putative Phage Associated Protein; Prophage LambdaW1 Baseplate Assembly Protein J; Phage Baseplate Assembly Protein GpJ; Phage Tail Protein; Phage Baseplate-Like Protein
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSTPIDLSRLPAPDVVEEIDFEAMLAERKAGLLSLVPDDRRAEVAAALELESEPITIVLQESVYREMYLRQRVNDAARAV MLAFAMDGDLDQLAALLGVQRLEITPADPETGAPAVMEGNSDLRYRTQLAPQGYSVAGPEGAYRSHALAAHGSVLDASAT SPAPGEVLVTVLSRDGDGTPSKEVIDAVTAALRADDVRPLTDKVTVRGATIIGYEVDAVLFTFPGPDSGVVLKEAAAKLA AYVDETHRIGREVTLSGIYAALHVNGVERVKLNAPTADVEISATQAPYCRAVKITPGGVYGG
Sequences:
>Translated_302_residues MSTPIDLSRLPAPDVVEEIDFEAMLAERKAGLLSLVPDDRRAEVAAALELESEPITIVLQESVYREMYLRQRVNDAARAV MLAFAMDGDLDQLAALLGVQRLEITPADPETGAPAVMEGNSDLRYRTQLAPQGYSVAGPEGAYRSHALAAHGSVLDASAT SPAPGEVLVTVLSRDGDGTPSKEVIDAVTAALRADDVRPLTDKVTVRGATIIGYEVDAVLFTFPGPDSGVVLKEAAAKLA AYVDETHRIGREVTLSGIYAALHVNGVERVKLNAPTADVEISATQAPYCRAVKITPGGVYGG >Mature_301_residues STPIDLSRLPAPDVVEEIDFEAMLAERKAGLLSLVPDDRRAEVAAALELESEPITIVLQESVYREMYLRQRVNDAARAVM LAFAMDGDLDQLAALLGVQRLEITPADPETGAPAVMEGNSDLRYRTQLAPQGYSVAGPEGAYRSHALAAHGSVLDASATS PAPGEVLVTVLSRDGDGTPSKEVIDAVTAALRADDVRPLTDKVTVRGATIIGYEVDAVLFTFPGPDSGVVLKEAAAKLAA YVDETHRIGREVTLSGIYAALHVNGVERVKLNAPTADVEISATQAPYCRAVKITPGGVYGG
Specific function: Unknown
COG id: COG3948
COG function: function code R; Phage-related baseplate assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31918; Mature: 31787
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPIDLSRLPAPDVVEEIDFEAMLAERKAGLLSLVPDDRRAEVAAALELESEPITIVLQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCHHHEEEEEEECCCCEEEEEH ESVYREMYLRQRVNDAARAVMLAFAMDGDLDQLAALLGVQRLEITPADPETGAPAVMEGN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEECCCCCCCCCEEEECC SDLRYRTQLAPQGYSVAGPEGAYRSHALAAHGSVLDASATSPAPGEVLVTVLSRDGDGTP CCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCEEEEEEECCCCCCC SKEVIDAVTAALRADDVRPLTDKVTVRGATIIGYEVDAVLFTFPGPDSGVVLKEAAAKLA HHHHHHHHHHHHHCCCCCCCCCEEEEECEEEEEEEEEEEEEECCCCCCCEEHHHHHHHHH AYVDETHRIGREVTLSGIYAALHVNGVERVKLNAPTADVEISATQAPYCRAVKITPGGVY HHHHHHHHCCCEEEHHHEEEEEEECCEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCC GG CC >Mature Secondary Structure STPIDLSRLPAPDVVEEIDFEAMLAERKAGLLSLVPDDRRAEVAAALELESEPITIVLQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCHHHEEEEEEECCCCEEEEEH ESVYREMYLRQRVNDAARAVMLAFAMDGDLDQLAALLGVQRLEITPADPETGAPAVMEGN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEECCCCCCCCCEEEECC SDLRYRTQLAPQGYSVAGPEGAYRSHALAAHGSVLDASATSPAPGEVLVTVLSRDGDGTP CCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCEEEEEEECCCCCCC SKEVIDAVTAALRADDVRPLTDKVTVRGATIIGYEVDAVLFTFPGPDSGVVLKEAAAKLA HHHHHHHHHHHHHCCCCCCCCCEEEEECEEEEEEEEEEEEEECCCCCCCEEHHHHHHHHH AYVDETHRIGREVTLSGIYAALHVNGVERVKLNAPTADVEISATQAPYCRAVKITPGGVY HHHHHHHHCCCEEEHHHEEEEEEECCEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCC GG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA