| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027349
Identifier: 238027349
GI number: 238027349
Start: 1914178
End: 1914723
Strand: Direct
Name: 238027349
Synonym: bglu_1g17390
Alternate gene names: NA
Gene position: 1914178-1914723 (Clockwise)
Preceding gene: 238027348
Following gene: 238027350
Centisome position: 49.0
GC content: 65.02
Gene sequence:
>546_bases ATGGCGGGTGATCTGCTGCCGCCGAACGCGTCGCCGCTGCTGCGCGCGATCGCGGCCGCGAATGCGCGGCTTGGTGAGGT GCCGGTGCCGATTCGCGACCTGATGAACCCGGACACGATCCGGCTCGATCTGCTGCCGTGGCTTGCGTGGCACTTGGGCG TCGTTACATGGAAAGACGACTGGCCCGAGCGCATCAAGCGCGCCCGCGTGAAAGCCGCTATCCCGATCGCGCGGAAGAAC GGCACGGCCGCGGCTGTCCGTGAAGTGGTCGAAAGCTTCGGCGGCAACATCGCAATGCGGGAATGGTTCGAGCAAGACCC GCCCGGCAAGCCCTACACCTTTGACATGGTGATGACCGTCGCGGCGCAAGACGGCAACCCGCCGACCGCGTCGTATATCG CGGACATTCTCGCGGAAGTGGATCGGGCGAAGCCCGTACGCGCCCACTACACCTTCACGCAGGGGTTTGCACTTAGCGGT TCGATCGGTGTCGGCGCTGGTGGACAGGCCGCGCTCTATCGTCGTCTGACGTTGACGGAACAATGA
Upstream 100 bases:
>100_bases GTCGAGCGCGTGAAGCTGAACGCGCCGACCGCTGACGTTGAGATTTCCGCCACGCAGGCGCCGTACTGCCGGGCGGTCAA GATCACTCCGGGAGGCGTTT
Downstream 100 bases:
>100_bases ACATGGCAGGGAATTTCATTCGAGTAACCGATGCCGGGCGCGCTGCGCTGGTAGCGCAAGGCAACACGGGGACGAACGAG CATCGCGTGACCGAAATCGG
Product: phage tail protein I
Products: NA
Alternate protein names: Tail Protein I; Phage Tail Protein; Phage-Related Tail Protein; Bacteriophage P2-Related Tail Formation Protein; Tail Protein I Prophage; Phage P2 Baseplate Assembly GpI-Like Protein; Prophage Tail Protein; Phage-Related Tail Protein I; Bacteriophage Protein; Bacteriophage Tail Protein I; Tail Formation-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPI; Bacteriophage P2-Related Tail Formation Protein GpI; Bacteriophage Tail Formation Protein I; Pyocin R2_PP Tail Formation Protein GpI; DNA Methylase; Pyocin R2_PP Tail Formation Protein
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MAGDLLPPNASPLLRAIAAANARLGEVPVPIRDLMNPDTIRLDLLPWLAWHLGVVTWKDDWPERIKRARVKAAIPIARKN GTAAAVREVVESFGGNIAMREWFEQDPPGKPYTFDMVMTVAAQDGNPPTASYIADILAEVDRAKPVRAHYTFTQGFALSG SIGVGAGGQAALYRRLTLTEQ
Sequences:
>Translated_181_residues MAGDLLPPNASPLLRAIAAANARLGEVPVPIRDLMNPDTIRLDLLPWLAWHLGVVTWKDDWPERIKRARVKAAIPIARKN GTAAAVREVVESFGGNIAMREWFEQDPPGKPYTFDMVMTVAAQDGNPPTASYIADILAEVDRAKPVRAHYTFTQGFALSG SIGVGAGGQAALYRRLTLTEQ >Mature_180_residues AGDLLPPNASPLLRAIAAANARLGEVPVPIRDLMNPDTIRLDLLPWLAWHLGVVTWKDDWPERIKRARVKAAIPIARKNG TAAAVREVVESFGGNIAMREWFEQDPPGKPYTFDMVMTVAAQDGNPPTASYIADILAEVDRAKPVRAHYTFTQGFALSGS IGVGAGGQAALYRRLTLTEQ
Specific function: Unknown
COG id: COG4385
COG function: function code R; Bacteriophage P2-related tail formation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19700; Mature: 19569
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGDLLPPNASPLLRAIAAANARLGEVPVPIRDLMNPDTIRLDLLPWLAWHLGVVTWKDD CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEHHHHHHHHHHCEEEECCC WPERIKRARVKAAIPIARKNGTAAAVREVVESFGGNIAMREWFEQDPPGKPYTFDMVMTV HHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHCCCEEHHHHHHCCCCCCCEEEEEEEEE AAQDGNPPTASYIADILAEVDRAKPVRAHYTFTQGFALSGSIGVGAGGQAALYRRLTLTE EECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCEEECCCCCCCCCCHHHHHHHEECCC Q C >Mature Secondary Structure AGDLLPPNASPLLRAIAAANARLGEVPVPIRDLMNPDTIRLDLLPWLAWHLGVVTWKDD CCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEHHHHHHHHHHCEEEECCC WPERIKRARVKAAIPIARKNGTAAAVREVVESFGGNIAMREWFEQDPPGKPYTFDMVMTV HHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHCCCEEHHHHHHCCCCCCCEEEEEEEEE AAQDGNPPTASYIADILAEVDRAKPVRAHYTFTQGFALSGSIGVGAGGQAALYRRLTLTE EECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCEEECCCCCCCCCCHHHHHHHEECCC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA