| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027331
Identifier: 238027331
GI number: 238027331
Start: 1900818
End: 1901693
Strand: Direct
Name: 238027331
Synonym: bglu_1g17210
Alternate gene names: NA
Gene position: 1900818-1901693 (Clockwise)
Preceding gene: 339905966
Following gene: 238027332
Centisome position: 48.66
GC content: 49.2
Gene sequence:
>876_bases ATGCCACAGTACTTGAAATACGATTACGATTCACTTGATGATTTTTGGAATGCAATTTCTCCGATTGGCGAGATATTCGG AAATTCGACCGGTCATTACGTATTTCGCGGGCACCGGGATAGCTCTTGGGAGTTGGTGCCGCAAGTTTATCGGCAAGATG TGATTAATAAATACAAAACCGGCATGGCCGCGACGCTTCATGATCATCCTGGGCAGACATTCTTCGAATGGATGCTGCTG GAGTCATTTATGCACCATTGCGACTTGCGAGGCTTATCCGTTCCGTTCGATTCAATGGATTTTCGCGAATATTTTTCGCT GCAAAATATCATGAATATGAACAGCATTAATAATAGACTTTGGCCGCAGGATAGAGTCTTGCCGCTGATGGCGATGGCTC AGCATCATGGTGTCCCGACCCGTCTGCTGGACTGGTCCAGCAATCCAATGGTTGCGTGCTACTTTGCGGCTGCGGGCGCT GTTAATGAGCCCACCATTCCAATGAATAAAAGGATTGCAGTTTTTGGTTTCGGCTTCGAGCCGCGTCGAAAGGACGCGGA GTATAGGTACGTGAGTGTCCCGGGGAGCACGTCTGTAAATATATCTGCGCAGGGTGGTGCATTCATACTGGTAAATAATT CCGGCGAAAGGGGCGAGATTTTCACCGTTGGCGCAAAGCTTGAGGACAAGCTAATTCACGACGATCGCCTCGTAAAATTA ACTTTGCCGATTTGTCTCGCAGGACAACTTCTATTGCGCTGCCACAAATTCGGCGTATCTGCAGCGTCCATCTTCCCCGG ATACGACGGGGTGGCGAAAGCTGTTTTGGAGCGGAATCTTGCGGAATCGTTTTTGGAACGGCTGGTAGCAGGCTGA
Upstream 100 bases:
>100_bases ATACAATCGATTCCGCACGATGGGGGGCGAGCCGCGCCTAACGCCATCCAGTGGCCGTGCCCCGAGCCGTCGCAACGTCT ACTGCCCAAGAGGGAGGGGT
Downstream 100 bases:
>100_bases CGCGGATTGGTATGTGAGCGGGTGCACATTTACGATATTGGGGCGGGCATGTACAGCACGTTGGAATCCATACAGGCGCT GATCGGTGTAGAGGCTGAAT
Product: FRG domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MPQYLKYDYDSLDDFWNAISPIGEIFGNSTGHYVFRGHRDSSWELVPQVYRQDVINKYKTGMAATLHDHPGQTFFEWMLL ESFMHHCDLRGLSVPFDSMDFREYFSLQNIMNMNSINNRLWPQDRVLPLMAMAQHHGVPTRLLDWSSNPMVACYFAAAGA VNEPTIPMNKRIAVFGFGFEPRRKDAEYRYVSVPGSTSVNISAQGGAFILVNNSGERGEIFTVGAKLEDKLIHDDRLVKL TLPICLAGQLLLRCHKFGVSAASIFPGYDGVAKAVLERNLAESFLERLVAG
Sequences:
>Translated_291_residues MPQYLKYDYDSLDDFWNAISPIGEIFGNSTGHYVFRGHRDSSWELVPQVYRQDVINKYKTGMAATLHDHPGQTFFEWMLL ESFMHHCDLRGLSVPFDSMDFREYFSLQNIMNMNSINNRLWPQDRVLPLMAMAQHHGVPTRLLDWSSNPMVACYFAAAGA VNEPTIPMNKRIAVFGFGFEPRRKDAEYRYVSVPGSTSVNISAQGGAFILVNNSGERGEIFTVGAKLEDKLIHDDRLVKL TLPICLAGQLLLRCHKFGVSAASIFPGYDGVAKAVLERNLAESFLERLVAG >Mature_290_residues PQYLKYDYDSLDDFWNAISPIGEIFGNSTGHYVFRGHRDSSWELVPQVYRQDVINKYKTGMAATLHDHPGQTFFEWMLLE SFMHHCDLRGLSVPFDSMDFREYFSLQNIMNMNSINNRLWPQDRVLPLMAMAQHHGVPTRLLDWSSNPMVACYFAAAGAV NEPTIPMNKRIAVFGFGFEPRRKDAEYRYVSVPGSTSVNISAQGGAFILVNNSGERGEIFTVGAKLEDKLIHDDRLVKLT LPICLAGQLLLRCHKFGVSAASIFPGYDGVAKAVLERNLAESFLERLVAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32849; Mature: 32718
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQYLKYDYDSLDDFWNAISPIGEIFGNSTGHYVFRGHRDSSWELVPQVYRQDVINKYKT CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHC GMAATLHDHPGQTFFEWMLLESFMHHCDLRGLSVPFDSMDFREYFSLQNIMNMNSINNRL CCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC WPQDRVLPLMAMAQHHGVPTRLLDWSSNPMVACYFAAAGAVNEPTIPMNKRIAVFGFGFE CCCHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCC PRRKDAEYRYVSVPGSTSVNISAQGGAFILVNNSGERGEIFTVGAKLEDKLIHDDRLVKL CCCCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCCCCEEEECCCHHHHHCCCCEEEEE TLPICLAGQLLLRCHKFGVSAASIFPGYDGVAKAVLERNLAESFLERLVAG EHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PQYLKYDYDSLDDFWNAISPIGEIFGNSTGHYVFRGHRDSSWELVPQVYRQDVINKYKT CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHC GMAATLHDHPGQTFFEWMLLESFMHHCDLRGLSVPFDSMDFREYFSLQNIMNMNSINNRL CCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC WPQDRVLPLMAMAQHHGVPTRLLDWSSNPMVACYFAAAGAVNEPTIPMNKRIAVFGFGFE CCCHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCC PRRKDAEYRYVSVPGSTSVNISAQGGAFILVNNSGERGEIFTVGAKLEDKLIHDDRLVKL CCCCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCCCCEEEECCCHHHHHCCCCEEEEE TLPICLAGQLLLRCHKFGVSAASIFPGYDGVAKAVLERNLAESFLERLVAG EHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA