| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027332
Identifier: 238027332
GI number: 238027332
Start: 1901742
End: 1902674
Strand: Direct
Name: 238027332
Synonym: bglu_1g17220
Alternate gene names: NA
Gene position: 1901742-1902674 (Clockwise)
Preceding gene: 238027331
Following gene: 238027335
Centisome position: 48.68
GC content: 56.06
Gene sequence:
>933_bases ATGTACAGCACGTTGGAATCCATACAGGCGCTGATCGGTGTAGAGGCTGAATCAATAAGCCTTGAGTTCAAAGACGGCAC GAAGCTCGACGGTCTGACTGAGCGCGCCAAGACCGAATTGGTCACCGACGTTACCGCCTTCGCCAATGCCGGTGGGGGCA CCGTGATTTATGGTTTGCAAGAGGAATCGCGCGAGGGGCAGTCCCTTGCATCGGCGATCTCTCCGGTCACAGACGTCAGG GTCACGCAGGACAGGTTGCGCGACGTAATTTACTCAAACACTGATCCAGCATTGCGGGCATTCTCGATTACCACGATCGT CGCCGAAGGCGGTTCGATCTTCGTGATCGAAATTGCGGAGGGCGACACCGCGTATCAAAACAAGCGCGATCAACGTTTCT ATAGCCGGGTTGACGCATCGGCGCATCCAATGTACGCGTTCGCTGTCCGCGACGTAATGAATCGAAGAACGCGGCCGCAC GTTAGTGTGCGGTTTGTCATTCGACGGCGAACAGTCGAGCAAGGCCGCCATGTGTATGTGTTGGTGCCCAAACTCGAAAA TGAGGGCAATCTCACTGCCAACCATTGGACTTTCCGCCTCGGCGTACCGGTCCCAATTGGACGGGCAGACGGGGTCTTGG GACGCAATATGCACTCAATCGGCCAGTCGAGGGAGGGACTTCATACTGTTCAATGGTTTGAGTACTCATCGGAATGGGGC GGGGCGCTCGGTACCGCGAGGTTGAGAATCCTTCCCGGGGATACTCTCGAACTAGATATGAGCCACGGCTATCCGGAAGT CCTACTGGTGATCAACGGTATTGCCGAGATTCGAGCCGCCGAGCTAGATCCGCCCATATTCTGGTCACTACTGCTCGACA ACGCTCCCCGGCAGACGGGAGAAATGCCATACAGTGACTGGTCAGTCTGGTAA
Upstream 100 bases:
>100_bases TTTGGAGCGGAATCTTGCGGAATCGTTTTTGGAACGGCTGGTAGCAGGCTGACGCGGATTGGTATGTGAGCGGGTGCACA TTTACGATATTGGGGCGGGC
Downstream 100 bases:
>100_bases CGGGAATCAGGATGAGGGAATTCATGGCCGCCGTAATTTATCTTGCATACAGGATCAAGGATGAGAGATTGATGCGGCCG GAACGATATAGTCGGTAAAT
Product: putative transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MYSTLESIQALIGVEAESISLEFKDGTKLDGLTERAKTELVTDVTAFANAGGGTVIYGLQEESREGQSLASAISPVTDVR VTQDRLRDVIYSNTDPALRAFSITTIVAEGGSIFVIEIAEGDTAYQNKRDQRFYSRVDASAHPMYAFAVRDVMNRRTRPH VSVRFVIRRRTVEQGRHVYVLVPKLENEGNLTANHWTFRLGVPVPIGRADGVLGRNMHSIGQSREGLHTVQWFEYSSEWG GALGTARLRILPGDTLELDMSHGYPEVLLVINGIAEIRAAELDPPIFWSLLLDNAPRQTGEMPYSDWSVW
Sequences:
>Translated_310_residues MYSTLESIQALIGVEAESISLEFKDGTKLDGLTERAKTELVTDVTAFANAGGGTVIYGLQEESREGQSLASAISPVTDVR VTQDRLRDVIYSNTDPALRAFSITTIVAEGGSIFVIEIAEGDTAYQNKRDQRFYSRVDASAHPMYAFAVRDVMNRRTRPH VSVRFVIRRRTVEQGRHVYVLVPKLENEGNLTANHWTFRLGVPVPIGRADGVLGRNMHSIGQSREGLHTVQWFEYSSEWG GALGTARLRILPGDTLELDMSHGYPEVLLVINGIAEIRAAELDPPIFWSLLLDNAPRQTGEMPYSDWSVW >Mature_310_residues MYSTLESIQALIGVEAESISLEFKDGTKLDGLTERAKTELVTDVTAFANAGGGTVIYGLQEESREGQSLASAISPVTDVR VTQDRLRDVIYSNTDPALRAFSITTIVAEGGSIFVIEIAEGDTAYQNKRDQRFYSRVDASAHPMYAFAVRDVMNRRTRPH VSVRFVIRRRTVEQGRHVYVLVPKLENEGNLTANHWTFRLGVPVPIGRADGVLGRNMHSIGQSREGLHTVQWFEYSSEWG GALGTARLRILPGDTLELDMSHGYPEVLLVINGIAEIRAAELDPPIFWSLLLDNAPRQTGEMPYSDWSVW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34480; Mature: 34480
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSTLESIQALIGVEAESISLEFKDGTKLDGLTERAKTELVTDVTAFANAGGGTVIYGLQ CCCHHHHHHHHHCCCCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC EESREGQSLASAISPVTDVRVTQDRLRDVIYSNTDPALRAFSITTIVAEGGSIFVIEIAE HHCCHHHHHHHHHCCHHHEEECHHHHHHHHHCCCCCHHEEEEEEEEEECCCCEEEEEECC GDTAYQNKRDQRFYSRVDASAHPMYAFAVRDVMNRRTRPHVSVRFVIRRRTVEQGRHVYV CCCHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHCCCEEEE LVPKLENEGNLTANHWTFRLGVPVPIGRADGVLGRNMHSIGQSREGLHTVQWFEYSSEWG EEEEECCCCCEEECEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCC GALGTARLRILPGDTLELDMSHGYPEVLLVINGIAEIRAAELDPPIFWSLLLDNAPRQTG CCCCEEEEEEECCCCEEEECCCCCCEEEEEECCHHHHHHHCCCCCCEEHHHHCCCCCCCC EMPYSDWSVW CCCCCCCCCC >Mature Secondary Structure MYSTLESIQALIGVEAESISLEFKDGTKLDGLTERAKTELVTDVTAFANAGGGTVIYGLQ CCCHHHHHHHHHCCCCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC EESREGQSLASAISPVTDVRVTQDRLRDVIYSNTDPALRAFSITTIVAEGGSIFVIEIAE HHCCHHHHHHHHHCCHHHEEECHHHHHHHHHCCCCCHHEEEEEEEEEECCCCEEEEEECC GDTAYQNKRDQRFYSRVDASAHPMYAFAVRDVMNRRTRPHVSVRFVIRRRTVEQGRHVYV CCCHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHCCCEEEE LVPKLENEGNLTANHWTFRLGVPVPIGRADGVLGRNMHSIGQSREGLHTVQWFEYSSEWG EEEEECCCCCEEECEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCC GALGTARLRILPGDTLELDMSHGYPEVLLVINGIAEIRAAELDPPIFWSLLLDNAPRQTG CCCCEEEEEEECCCCEEEECCCCCCEEEEEECCHHHHHHHCCCCCCEEHHHHCCCCCCCC EMPYSDWSVW CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA