Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027332

Identifier: 238027332

GI number: 238027332

Start: 1901742

End: 1902674

Strand: Direct

Name: 238027332

Synonym: bglu_1g17220

Alternate gene names: NA

Gene position: 1901742-1902674 (Clockwise)

Preceding gene: 238027331

Following gene: 238027335

Centisome position: 48.68

GC content: 56.06

Gene sequence:

>933_bases
ATGTACAGCACGTTGGAATCCATACAGGCGCTGATCGGTGTAGAGGCTGAATCAATAAGCCTTGAGTTCAAAGACGGCAC
GAAGCTCGACGGTCTGACTGAGCGCGCCAAGACCGAATTGGTCACCGACGTTACCGCCTTCGCCAATGCCGGTGGGGGCA
CCGTGATTTATGGTTTGCAAGAGGAATCGCGCGAGGGGCAGTCCCTTGCATCGGCGATCTCTCCGGTCACAGACGTCAGG
GTCACGCAGGACAGGTTGCGCGACGTAATTTACTCAAACACTGATCCAGCATTGCGGGCATTCTCGATTACCACGATCGT
CGCCGAAGGCGGTTCGATCTTCGTGATCGAAATTGCGGAGGGCGACACCGCGTATCAAAACAAGCGCGATCAACGTTTCT
ATAGCCGGGTTGACGCATCGGCGCATCCAATGTACGCGTTCGCTGTCCGCGACGTAATGAATCGAAGAACGCGGCCGCAC
GTTAGTGTGCGGTTTGTCATTCGACGGCGAACAGTCGAGCAAGGCCGCCATGTGTATGTGTTGGTGCCCAAACTCGAAAA
TGAGGGCAATCTCACTGCCAACCATTGGACTTTCCGCCTCGGCGTACCGGTCCCAATTGGACGGGCAGACGGGGTCTTGG
GACGCAATATGCACTCAATCGGCCAGTCGAGGGAGGGACTTCATACTGTTCAATGGTTTGAGTACTCATCGGAATGGGGC
GGGGCGCTCGGTACCGCGAGGTTGAGAATCCTTCCCGGGGATACTCTCGAACTAGATATGAGCCACGGCTATCCGGAAGT
CCTACTGGTGATCAACGGTATTGCCGAGATTCGAGCCGCCGAGCTAGATCCGCCCATATTCTGGTCACTACTGCTCGACA
ACGCTCCCCGGCAGACGGGAGAAATGCCATACAGTGACTGGTCAGTCTGGTAA

Upstream 100 bases:

>100_bases
TTTGGAGCGGAATCTTGCGGAATCGTTTTTGGAACGGCTGGTAGCAGGCTGACGCGGATTGGTATGTGAGCGGGTGCACA
TTTACGATATTGGGGCGGGC

Downstream 100 bases:

>100_bases
CGGGAATCAGGATGAGGGAATTCATGGCCGCCGTAATTTATCTTGCATACAGGATCAAGGATGAGAGATTGATGCGGCCG
GAACGATATAGTCGGTAAAT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MYSTLESIQALIGVEAESISLEFKDGTKLDGLTERAKTELVTDVTAFANAGGGTVIYGLQEESREGQSLASAISPVTDVR
VTQDRLRDVIYSNTDPALRAFSITTIVAEGGSIFVIEIAEGDTAYQNKRDQRFYSRVDASAHPMYAFAVRDVMNRRTRPH
VSVRFVIRRRTVEQGRHVYVLVPKLENEGNLTANHWTFRLGVPVPIGRADGVLGRNMHSIGQSREGLHTVQWFEYSSEWG
GALGTARLRILPGDTLELDMSHGYPEVLLVINGIAEIRAAELDPPIFWSLLLDNAPRQTGEMPYSDWSVW

Sequences:

>Translated_310_residues
MYSTLESIQALIGVEAESISLEFKDGTKLDGLTERAKTELVTDVTAFANAGGGTVIYGLQEESREGQSLASAISPVTDVR
VTQDRLRDVIYSNTDPALRAFSITTIVAEGGSIFVIEIAEGDTAYQNKRDQRFYSRVDASAHPMYAFAVRDVMNRRTRPH
VSVRFVIRRRTVEQGRHVYVLVPKLENEGNLTANHWTFRLGVPVPIGRADGVLGRNMHSIGQSREGLHTVQWFEYSSEWG
GALGTARLRILPGDTLELDMSHGYPEVLLVINGIAEIRAAELDPPIFWSLLLDNAPRQTGEMPYSDWSVW
>Mature_310_residues
MYSTLESIQALIGVEAESISLEFKDGTKLDGLTERAKTELVTDVTAFANAGGGTVIYGLQEESREGQSLASAISPVTDVR
VTQDRLRDVIYSNTDPALRAFSITTIVAEGGSIFVIEIAEGDTAYQNKRDQRFYSRVDASAHPMYAFAVRDVMNRRTRPH
VSVRFVIRRRTVEQGRHVYVLVPKLENEGNLTANHWTFRLGVPVPIGRADGVLGRNMHSIGQSREGLHTVQWFEYSSEWG
GALGTARLRILPGDTLELDMSHGYPEVLLVINGIAEIRAAELDPPIFWSLLLDNAPRQTGEMPYSDWSVW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34480; Mature: 34480

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSTLESIQALIGVEAESISLEFKDGTKLDGLTERAKTELVTDVTAFANAGGGTVIYGLQ
CCCHHHHHHHHHCCCCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
EESREGQSLASAISPVTDVRVTQDRLRDVIYSNTDPALRAFSITTIVAEGGSIFVIEIAE
HHCCHHHHHHHHHCCHHHEEECHHHHHHHHHCCCCCHHEEEEEEEEEECCCCEEEEEECC
GDTAYQNKRDQRFYSRVDASAHPMYAFAVRDVMNRRTRPHVSVRFVIRRRTVEQGRHVYV
CCCHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHCCCEEEE
LVPKLENEGNLTANHWTFRLGVPVPIGRADGVLGRNMHSIGQSREGLHTVQWFEYSSEWG
EEEEECCCCCEEECEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCC
GALGTARLRILPGDTLELDMSHGYPEVLLVINGIAEIRAAELDPPIFWSLLLDNAPRQTG
CCCCEEEEEEECCCCEEEECCCCCCEEEEEECCHHHHHHHCCCCCCEEHHHHCCCCCCCC
EMPYSDWSVW
CCCCCCCCCC
>Mature Secondary Structure
MYSTLESIQALIGVEAESISLEFKDGTKLDGLTERAKTELVTDVTAFANAGGGTVIYGLQ
CCCHHHHHHHHHCCCCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
EESREGQSLASAISPVTDVRVTQDRLRDVIYSNTDPALRAFSITTIVAEGGSIFVIEIAE
HHCCHHHHHHHHHCCHHHEEECHHHHHHHHHCCCCCHHEEEEEEEEEECCCCEEEEEECC
GDTAYQNKRDQRFYSRVDASAHPMYAFAVRDVMNRRTRPHVSVRFVIRRRTVEQGRHVYV
CCCHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHCCCEEEE
LVPKLENEGNLTANHWTFRLGVPVPIGRADGVLGRNMHSIGQSREGLHTVQWFEYSSEWG
EEEEECCCCCEEECEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCC
GALGTARLRILPGDTLELDMSHGYPEVLLVINGIAEIRAAELDPPIFWSLLLDNAPRQTG
CCCCEEEEEEECCCCEEEECCCCCCEEEEEECCHHHHHHHCCCCCCEEHHHHCCCCCCCC
EMPYSDWSVW
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA