| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027310
Identifier: 238027310
GI number: 238027310
Start: 1884495
End: 1885418
Strand: Reverse
Name: 238027310
Synonym: bglu_1g16980
Alternate gene names: NA
Gene position: 1885418-1884495 (Counterclockwise)
Preceding gene: 238027311
Following gene: 238027309
Centisome position: 48.26
GC content: 62.55
Gene sequence:
>924_bases ATGTCACAATTCAAACTGACGCCCGAGGACATCGCGCGTTTCCGAGAACAAGGCTATCTGGGCCCGTTCAAGCTGTATTC GGAAGACGAGGCACGCGAGCGCTACCGCCAGATCCGCTCGCAGCTGTTCGATCGCGAATACGCGATCTACGATCTGCCCG CCACGAGCCCGATTGCGAACTACGATCGCCACCTCGACGTGAACCTGCTCAGCGAGCACGTCACGCGTCCGGAGATCGTG CAAAAGCTCAATGCGATCCTTGGCCCGGATCTCATCTGCTGGCGCTCCGAGATGTTCCCGAAGTATCCGGGCGACGAGGG CACCGACTGGCACCAGGCCGACACCTTCGCGCATGCCTCCGGCAAGCCGCAGGTGGTGTGGCCAGGCGACGGCCGTTTCG GCGGCGCCATCACGGTCTGGACCGCGCTCACCGACTGCGACGAGGAAAACGGCTGCCTGCGCTTCGTGCCCGGCACCCAT GAGGAGATGTTCTACGACGAGGCGAAGAAGATGGCCTTCGATCCGTCGAACATCAACGCGCTGGAGAAGGACGGCATCAA GCGTGGCTTTTTCGGCTACGACTATCGCAGCCTGCAGAAGGATCCGGACTGGAGGCCGGACGAAAACGCCGCCGTGTCGC TCAAGATGAAGGCCGGCGAATTCGTGATCTTCTGGTCGACGCTGATGCACTCCTCGTTCCCGAACTCCACCAAGGATCGC ACCCGCCTCGGCTACGCCTGCCGCTATGTGCCGACCTCGGTGCAGATCTACCCCGACACCGATACCGTCAGCGAGTACGG CAGCGAGGTTCGGCTCGACAAGTACGGCGTGGTGCTGGTGTCCGGCGAGGATCATTTCGACCACAACCGCCGCGTCACCT GCAACGCACGCGGCCTGCCCTTCATGCAGAGCGTCGAGGCATGA
Upstream 100 bases:
>100_bases TGGGCCAACGCCTACCGCGACGCCGCCAGCGCGGCATGAGCGCCGGCGGCGCATCCGGCCGTTTTCCGCAACACCCGTTA CCATCCGAGGAGGCACTCCC
Downstream 100 bases:
>100_bases GCGTGGCGCGCGGCGCGGCCAGCCCGGCTCCGCCCCGCTGCGTCGCGCGCCGTGCCAGATCCTTGTCCCAGCTGTTTCTC CCCCTCCTGCCTCATCTGCC
Product: CmaB protein
Products: NA
Alternate protein names: Phytanoyl-CoA Dioxygenase; Phytanoyl-CoA Dioxygenase Family Protein; Non-Ribosomal Peptide Synthase Related Protein; CmaB Protein; Coronamic Acid Synthetase; Coronamic Acid Synthetase Chlorinating Component; Coronamic Acid Synthetase CmaB; Non-Haem Iron Halogenase
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSQFKLTPEDIARFREQGYLGPFKLYSEDEARERYRQIRSQLFDREYAIYDLPATSPIANYDRHLDVNLLSEHVTRPEIV QKLNAILGPDLICWRSEMFPKYPGDEGTDWHQADTFAHASGKPQVVWPGDGRFGGAITVWTALTDCDEENGCLRFVPGTH EEMFYDEAKKMAFDPSNINALEKDGIKRGFFGYDYRSLQKDPDWRPDENAAVSLKMKAGEFVIFWSTLMHSSFPNSTKDR TRLGYACRYVPTSVQIYPDTDTVSEYGSEVRLDKYGVVLVSGEDHFDHNRRVTCNARGLPFMQSVEA
Sequences:
>Translated_307_residues MSQFKLTPEDIARFREQGYLGPFKLYSEDEARERYRQIRSQLFDREYAIYDLPATSPIANYDRHLDVNLLSEHVTRPEIV QKLNAILGPDLICWRSEMFPKYPGDEGTDWHQADTFAHASGKPQVVWPGDGRFGGAITVWTALTDCDEENGCLRFVPGTH EEMFYDEAKKMAFDPSNINALEKDGIKRGFFGYDYRSLQKDPDWRPDENAAVSLKMKAGEFVIFWSTLMHSSFPNSTKDR TRLGYACRYVPTSVQIYPDTDTVSEYGSEVRLDKYGVVLVSGEDHFDHNRRVTCNARGLPFMQSVEA >Mature_306_residues SQFKLTPEDIARFREQGYLGPFKLYSEDEARERYRQIRSQLFDREYAIYDLPATSPIANYDRHLDVNLLSEHVTRPEIVQ KLNAILGPDLICWRSEMFPKYPGDEGTDWHQADTFAHASGKPQVVWPGDGRFGGAITVWTALTDCDEENGCLRFVPGTHE EMFYDEAKKMAFDPSNINALEKDGIKRGFFGYDYRSLQKDPDWRPDENAAVSLKMKAGEFVIFWSTLMHSSFPNSTKDRT RLGYACRYVPTSVQIYPDTDTVSEYGSEVRLDKYGVVLVSGEDHFDHNRRVTCNARGLPFMQSVEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35261; Mature: 35129
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFKLTPEDIARFREQGYLGPFKLYSEDEARERYRQIRSQLFDREYAIYDLPATSPIAN CCCCCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC YDRHLDVNLLSEHVTRPEIVQKLNAILGPDLICWRSEMFPKYPGDEGTDWHQADTFAHAS CCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCEEEHHHCCCCCCCCCCCCCCHHHHEECCC GKPQVVWPGDGRFGGAITVWTALTDCDEENGCLRFVPGTHEEMFYDEAKKMAFDPSNINA CCCEEEECCCCCCCCEEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCH LEKDGIKRGFFGYDYRSLQKDPDWRPDENAAVSLKMKAGEFVIFWSTLMHSSFPNSTKDR HHHCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEECCCEEEEEHHHHHCCCCCCCCHH TRLGYACRYVPTSVQIYPDTDTVSEYGSEVRLDKYGVVLVSGEDHFDHNRRVTCNARGLP HHHCEEEEECCCEEEEECCCCHHHHCCCEEEEEECCEEEECCCCCCCCCCEEEECCCCCC FMQSVEA HHHHCCC >Mature Secondary Structure SQFKLTPEDIARFREQGYLGPFKLYSEDEARERYRQIRSQLFDREYAIYDLPATSPIAN CCCCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC YDRHLDVNLLSEHVTRPEIVQKLNAILGPDLICWRSEMFPKYPGDEGTDWHQADTFAHAS CCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCEEEHHHCCCCCCCCCCCCCCHHHHEECCC GKPQVVWPGDGRFGGAITVWTALTDCDEENGCLRFVPGTHEEMFYDEAKKMAFDPSNINA CCCEEEECCCCCCCCEEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCH LEKDGIKRGFFGYDYRSLQKDPDWRPDENAAVSLKMKAGEFVIFWSTLMHSSFPNSTKDR HHHCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEECCCEEEEEHHHHHCCCCCCCCHH TRLGYACRYVPTSVQIYPDTDTVSEYGSEVRLDKYGVVLVSGEDHFDHNRRVTCNARGLP HHHCEEEEECCCEEEEECCCCHHHHCCCEEEEEECCEEEECCCCCCCCCCEEEECCCCCC FMQSVEA HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA