| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is fabZ [H]
Identifier: 238027290
GI number: 238027290
Start: 1844626
End: 1845123
Strand: Direct
Name: fabZ [H]
Synonym: bglu_1g16770
Alternate gene names: 238027290
Gene position: 1844626-1845123 (Clockwise)
Preceding gene: 238027289
Following gene: 238027291
Centisome position: 47.22
GC content: 76.71
Gene sequence:
>498_bases ATGACGGCCGCCCGCCCGCCGGCCGCCGCCGAGGCGCGCGCCACGCTCGACGCCGGCACCGCGCTCGGCCCCGACGCGGT GACGCGGCTGCTCGCGCATCGCGCGCCGTTCCTGTTCGTGCGCCATGCGCAGGTGGCCGCCGACGGCCTCGCGATCCGCG GCTTCCAGCAGTTCGCGCCCGACGAGCCGTGGTTCGCCGGCCATTTCCCCGACGCGCCGATCGTGCCGGGCGTGCTGCTG GTGGAGTTCGTCGCGCAGACCGCGAACCTGCTCGTCGGCCAGCGGCGCGGCGGCGAGGCGCGCTGCCACCTGGTGGGCGT GCGCAACGCGCGTTTCGTCCAGCCGGTGCTGCCCGGGCAGGCGCTCGAGGCCTGCGTGACGCTGCCGGCCGGCAGCGCCG CGCCGCGCGCCGGCGCGGTGGCGAATTTCGAGGCGGTGGTGTTGCGCGGCACCGAGCGCTGCATGAGCGCGACCGTCACG CTGTACCTGACGCAGTAG
Upstream 100 bases:
>100_bases CGGTGGAGCGCGCCACGCGCCGCGCGGTGCGGCACCCGCAGGCGCTGGTCGACGCGCTGGCGCCGCATCTGCCGGCCGGC GAGCCGGCGGGGGTGTGCGC
Downstream 100 bases:
>100_bases CCGCGCGGCGCGCCGCCGGACCCTCAACCCAGACGGAGACAAGCATGAGCGACGTAACGACGAAGCACGAGATCATCGAG GTGATCAGGACCGAACTGCT
Product: (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTAARPPAAAEARATLDAGTALGPDAVTRLLAHRAPFLFVRHAQVAADGLAIRGFQQFAPDEPWFAGHFPDAPIVPGVLL VEFVAQTANLLVGQRRGGEARCHLVGVRNARFVQPVLPGQALEACVTLPAGSAAPRAGAVANFEAVVLRGTERCMSATVT LYLTQ
Sequences:
>Translated_165_residues MTAARPPAAAEARATLDAGTALGPDAVTRLLAHRAPFLFVRHAQVAADGLAIRGFQQFAPDEPWFAGHFPDAPIVPGVLL VEFVAQTANLLVGQRRGGEARCHLVGVRNARFVQPVLPGQALEACVTLPAGSAAPRAGAVANFEAVVLRGTERCMSATVT LYLTQ >Mature_164_residues TAARPPAAAEARATLDAGTALGPDAVTRLLAHRAPFLFVRHAQVAADGLAIRGFQQFAPDEPWFAGHFPDAPIVPGVLLV EFVAQTANLLVGQRRGGEARCHLVGVRNARFVQPVLPGQALEACVTLPAGSAAPRAGAVANFEAVVLRGTERCMSATVTL YLTQ
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786377, Length=112, Percent_Identity=37.5, Blast_Score=74, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.-
Molecular weight: Translated: 17273; Mature: 17142
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAARPPAAAEARATLDAGTALGPDAVTRLLAHRAPFLFVRHAQVAADGLAIRGFQQFAP CCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHCCEEECCHHHHCC DEPWFAGHFPDAPIVPGVLLVEFVAQTANLLVGQRRGGEARCHLVGVRNARFVQPVLPGQ CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCH ALEACVTLPAGSAAPRAGAVANFEAVVLRGTERCMSATVTLYLTQ HHHHHEECCCCCCCCCCCCCCCCEEEEEECHHHHHEEEEEEEEEC >Mature Secondary Structure TAARPPAAAEARATLDAGTALGPDAVTRLLAHRAPFLFVRHAQVAADGLAIRGFQQFAP CCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHCCEEECCHHHHCC DEPWFAGHFPDAPIVPGVLLVEFVAQTANLLVGQRRGGEARCHLVGVRNARFVQPVLPGQ CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCH ALEACVTLPAGSAAPRAGAVANFEAVVLRGTERCMSATVTLYLTQ HHHHHEECCCCCCCCCCCCCCCCEEEEEECHHHHHEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]