| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027283
Identifier: 238027283
GI number: 238027283
Start: 1838438
End: 1839391
Strand: Direct
Name: 238027283
Synonym: bglu_1g16700
Alternate gene names: NA
Gene position: 1838438-1839391 (Clockwise)
Preceding gene: 238027282
Following gene: 238027284
Centisome position: 47.06
GC content: 78.09
Gene sequence:
>954_bases ATGAGCCACCATCCGACAGCCGCGCTGCGCATCGTGGCCACCGCCGGCGCCGCGCCCGACGCGCCCGGCACGCCGGCCGA CGCCTGGCTGCATGCCGAGCGCCGCTCGCGCAAGGTCGGCCCGCTGCCCGTCAAGGCGCGCCTCGCGCTGGCCGCCTTCG AGCGCCTGCGCGCCGCGCTCGGCGACGACGACCGGCGGTGCGCCGCGCCGCGCGCGGGCGTGAGCCTCGGCACGCTGTTC GGCTCGATCGAGGTGGCCGAGCAGTGTCTGAGCGCCGTCCACGAGCATGGCTTCGAGCGCGTCACGCCGTCGTGGTACGC CACCGGCCTGCCGAACGCCACCGCCGCGATTCTCGCCTCGCTGGGCGAGCTGCAAGGCCCGAATCTGAGCTTTCTCGGCT ATCAGGCCGGGCTCGACGCGATCGTCGGCGCGGCGCGCCAGATCGTGGCGGGCCATGCCGATGCGATGTGCGCGGGCGGC TTCGACCTGCCGAGCGAGCGCTACGTGGCACGCGCGCGGGCGCAGGCGCCGTTCGCGCAGGCCGCCGCGATCCATGCCGG CGTCGGCCTGGTCTGGCTCGCGGCCGGCGCGCCGCGCGCGGGCGACGCGGGGCAGCTGCTGGGCTGGTCGCAGCGGCTGT TCGACGACGCCGCCTTCGAGGCCGCGCGCGGCGACGGCTTCCGGCCGCTGGTGGCGGCCGCCCGCGCCATGGCCGGGCAA GCCGCCGCCGGCCTCGAGCCGGCGCTGCACCTGGTCGCCCCGGGGCTGCCCGGCGCGGTCGAGCGGCTCGCGGCCGGCGC ACCGCTCGCGCTGGCCGAGGGGCTGGCCGGCCGCTGGCAGCCCGGGCTGCACGCGCTCGTCGTCAAGGGGCTCGGCCCGG TGACGACCTGCGTGCTGGTCGGCAAGCCCGGCGGCGCCGGCCATCGATCCAGCCAGCAGGAGGCCGCCTCATGA
Upstream 100 bases:
>100_bases GCGCCAGCGTGCTGGTGGACGCGTTCGGCTTCGGCGGCAACAACTGCGTGATGGTGCTGACCGATCCGGCCGCGCTGCAC GAGCTCGAGGAGGGCGCGGC
Downstream 100 bases:
>100_bases ACCCGATCGACAAGGCAAGCGCCGGCGCAGGCGAGCGCATGAACGGCAACGAGGCGAGCGCGGCGATGGCAGCGAGGCCA GCGCCGAATCCGTTCGCGGG
Product: beta-ketoacyl synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSHHPTAALRIVATAGAAPDAPGTPADAWLHAERRSRKVGPLPVKARLALAAFERLRAALGDDDRRCAAPRAGVSLGTLF GSIEVAEQCLSAVHEHGFERVTPSWYATGLPNATAAILASLGELQGPNLSFLGYQAGLDAIVGAARQIVAGHADAMCAGG FDLPSERYVARARAQAPFAQAAAIHAGVGLVWLAAGAPRAGDAGQLLGWSQRLFDDAAFEAARGDGFRPLVAAARAMAGQ AAAGLEPALHLVAPGLPGAVERLAAGAPLALAEGLAGRWQPGLHALVVKGLGPVTTCVLVGKPGGAGHRSSQQEAAS
Sequences:
>Translated_317_residues MSHHPTAALRIVATAGAAPDAPGTPADAWLHAERRSRKVGPLPVKARLALAAFERLRAALGDDDRRCAAPRAGVSLGTLF GSIEVAEQCLSAVHEHGFERVTPSWYATGLPNATAAILASLGELQGPNLSFLGYQAGLDAIVGAARQIVAGHADAMCAGG FDLPSERYVARARAQAPFAQAAAIHAGVGLVWLAAGAPRAGDAGQLLGWSQRLFDDAAFEAARGDGFRPLVAAARAMAGQ AAAGLEPALHLVAPGLPGAVERLAAGAPLALAEGLAGRWQPGLHALVVKGLGPVTTCVLVGKPGGAGHRSSQQEAAS >Mature_316_residues SHHPTAALRIVATAGAAPDAPGTPADAWLHAERRSRKVGPLPVKARLALAAFERLRAALGDDDRRCAAPRAGVSLGTLFG SIEVAEQCLSAVHEHGFERVTPSWYATGLPNATAAILASLGELQGPNLSFLGYQAGLDAIVGAARQIVAGHADAMCAGGF DLPSERYVARARAQAPFAQAAAIHAGVGLVWLAAGAPRAGDAGQLLGWSQRLFDDAAFEAARGDGFRPLVAAARAMAGQA AAGLEPALHLVAPGLPGAVERLAAGAPLALAEGLAGRWQPGLHALVVKGLGPVTTCVLVGKPGGAGHRSSQQEAAS
Specific function: Unknown
COG id: COG0304
COG function: function code IQ; 3-oxoacyl-(acyl-carrier-protein) synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32102; Mature: 31971
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHHPTAALRIVATAGAAPDAPGTPADAWLHAERRSRKVGPLPVKARLALAAFERLRAAL CCCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH GDDDRRCAAPRAGVSLGTLFGSIEVAEQCLSAVHEHGFERVTPSWYATGLPNATAAILAS CCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHH LGELQGPNLSFLGYQAGLDAIVGAARQIVAGHADAMCAGGFDLPSERYVARARAQAPFAQ HHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHCCCHHH AAAIHAGVGLVWLAAGAPRAGDAGQLLGWSQRLFDDAAFEAARGDGFRPLVAAARAMAGQ HHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AAAGLEPALHLVAPGLPGAVERLAAGAPLALAEGLAGRWQPGLHALVVKGLGPVTTCVLV HHCCCCHHHHHHCCCCCHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHCCCCHHEEEEE GKPGGAGHRSSQQEAAS ECCCCCCCCCCHHHCCC >Mature Secondary Structure SHHPTAALRIVATAGAAPDAPGTPADAWLHAERRSRKVGPLPVKARLALAAFERLRAAL CCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH GDDDRRCAAPRAGVSLGTLFGSIEVAEQCLSAVHEHGFERVTPSWYATGLPNATAAILAS CCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHH LGELQGPNLSFLGYQAGLDAIVGAARQIVAGHADAMCAGGFDLPSERYVARARAQAPFAQ HHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHCCCHHH AAAIHAGVGLVWLAAGAPRAGDAGQLLGWSQRLFDDAAFEAARGDGFRPLVAAARAMAGQ HHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AAAGLEPALHLVAPGLPGAVERLAAGAPLALAEGLAGRWQPGLHALVVKGLGPVTTCVLV HHCCCCHHHHHHCCCCCHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHCCCCHHEEEEE GKPGGAGHRSSQQEAAS ECCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA