| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027275
Identifier: 238027275
GI number: 238027275
Start: 1829449
End: 1831314
Strand: Direct
Name: 238027275
Synonym: bglu_1g16620
Alternate gene names: NA
Gene position: 1829449-1831314 (Clockwise)
Preceding gene: 238027274
Following gene: 238027276
Centisome position: 46.83
GC content: 69.94
Gene sequence:
>1866_bases ATGGACCCCAGAGCACATACGCCGACGCAAGACCACGCATCGCACAGCCTGTACGGTTTCGACATGACCGAGTACCTGCG TGGCGAGTCGTATGCGGGCCGTACCGCCTACGACGTCGCGCTGTCCGCCGCGACGCACGGCGGCATCTATCCGCTCGACC AGGCGCGTCTCGCGCTCGGCGTCCCGGAGCGCGCGGCATTGGCGGTGCTCGAACGGCACCCCGAGCTGCGCGTTCAGGCG AGCGCGCCGGCGCCGGCCGACACCACGCTGCGGCTCTACGTCAACTCGCTGGGCCGCCTGCACATCCGCCCCGCCGCCGA GCCGAAGATCGCCTACGACGAGGCGGACAGCTGGGTGGAGCTCGGCTTCGTCGACGCGGGTGCAGCCGTGCTGGCCGCCA TCGAGGCCGAGGCCGAAGCATGGCGCGCGGTCGAGCGCGAAAGCATGAAGGAGGTGCGCGCCGCGCTCGATCGCGTCCAT GCCGAGGGGCAGCTGCCGCGCGTGCTGGACGAGGTGATCGACCACGTCGAGCACGTCGAATCGGTCTGCTTCTACGTCGG CGACCGCTTCTTCGCGCTGATCGACCGCTACGTGAACCTGATCGACAGCAAGAGCGGCGGCGGCTTCCTGAGCGCGCTGC GCAAGCGCGATTATGCCGACTGGAGCGACGACGAGCGGCTGGTGGTGGCGGCGCTGCACGCGCTGTTCCTGTCGGGCCGT TCGGTGCGCTTCGAGGAATTCAACGGCGCGATGCTCAGCGCACGCGACGTGGTGGGGCGCCTGAACCAGCTCTCGGACAG CTACACGAAGGCGGGCTGCGAGGTGGCGGTGCCGGCCGAGCTCGACCTGTTCGAGCGCGCCGCGCTGATCCGCGAGCAGA CGCTCTGCGCGATCGGCAAGCCGTGGCTGCGCTACCGCTGGATCTACGGCCTGAACTTCCAGAAGACCGAGCGGATTCTC GACTCGACGGCCTCGACCGAGGCCGCCGACCAGTGGTATCGCGAGTTCGGCGAGGATTTCCGCGGCCTGGTCTCGCCGCA CGGCGAATTCCAGCCGCCCGAGTACGTGGCGATGGCACTGCTGGCCAACGCGGCGATCGCGCGCGACGTGGCCGGCATCG GCTGCGACGCGGGCAGCCCGGCCGTCACCAGCTGGACCGAGTACCTGATCGAGAAGACGGTGGCCTCGGCGGTGCTGGCC ACGCGCTCGGACTACGGCATGTCGAGCTCGCTGCGCGACATCGGGCAACTGGTCAGCTACGACGAGGCCACGCTGATCGA CACGATCCACGCGCTCACGCCGGCCAGCTTCTTCACGGCCTACGTCTCGCACCGCACCGTCGAGCGCTACGGCGAGGCCG AGAGCGCGGTGATCGCGAGCTCGGTGCAAAAGCGCATGCAGTTCAACCGCTGGCACTTCATTCCCGGCAACCTCGACCGG CCGCTGGTGCGCCAGTCGCGCCACTGGTACTACCCGCCGCTCGTGCCCGACATCTCGGCGCATTCGGACATGCACCGCGC CGCGCACAACCGGGCGCGCGTGAAGTTCTCGATTCGCGTGCCGGGGCCGGACATGTCGCGTCCGCCGCTGAACATCGCCG GGCGCCGCTACCGCGGCTTCTACGACGTGCGGGTGGTGCGTGCCGACGGCGCCGAGTACGGCACCGAGGACATGCTGCGC ATCCGGCGCCGCACGCTCTGGCTCGAAGCGCTCTACACCGCGCTCGCCAACTACCTGATGACGCCCGATGCGAAGCGGCT GACGATCCAGGGCTTCGCGGCCGGCAGCTACCGCAACCTTGCCGCCGACCGCCTGCCCGAGCCGGCGGTGGCGCGCGCGG CCACCATCGCGGAGGGCTCGGTCTGA
Upstream 100 bases:
>100_bases ATCCAATCGATACGAACCCAGCACCTGGCGGGTATCCGTCGCGAGCCGCGACGCGCCCGCCATCCGATCACGTTTCTTTG GCCGAAGAGAGGTAGGGACG
Downstream 100 bases:
>100_bases TGACGCGCCCGCCATCGGTGATCAACGCGGTGGCCGCGAACGGCGGCAAGCACGCCACGCAGCGCGTGACGTTCTTCCAG CAGGGCGGCCGCATCGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 621; Mature: 621
Protein sequence:
>621_residues MDPRAHTPTQDHASHSLYGFDMTEYLRGESYAGRTAYDVALSAATHGGIYPLDQARLALGVPERAALAVLERHPELRVQA SAPAPADTTLRLYVNSLGRLHIRPAAEPKIAYDEADSWVELGFVDAGAAVLAAIEAEAEAWRAVERESMKEVRAALDRVH AEGQLPRVLDEVIDHVEHVESVCFYVGDRFFALIDRYVNLIDSKSGGGFLSALRKRDYADWSDDERLVVAALHALFLSGR SVRFEEFNGAMLSARDVVGRLNQLSDSYTKAGCEVAVPAELDLFERAALIREQTLCAIGKPWLRYRWIYGLNFQKTERIL DSTASTEAADQWYREFGEDFRGLVSPHGEFQPPEYVAMALLANAAIARDVAGIGCDAGSPAVTSWTEYLIEKTVASAVLA TRSDYGMSSSLRDIGQLVSYDEATLIDTIHALTPASFFTAYVSHRTVERYGEAESAVIASSVQKRMQFNRWHFIPGNLDR PLVRQSRHWYYPPLVPDISAHSDMHRAAHNRARVKFSIRVPGPDMSRPPLNIAGRRYRGFYDVRVVRADGAEYGTEDMLR IRRRTLWLEALYTALANYLMTPDAKRLTIQGFAAGSYRNLAADRLPEPAVARAATIAEGSV
Sequences:
>Translated_621_residues MDPRAHTPTQDHASHSLYGFDMTEYLRGESYAGRTAYDVALSAATHGGIYPLDQARLALGVPERAALAVLERHPELRVQA SAPAPADTTLRLYVNSLGRLHIRPAAEPKIAYDEADSWVELGFVDAGAAVLAAIEAEAEAWRAVERESMKEVRAALDRVH AEGQLPRVLDEVIDHVEHVESVCFYVGDRFFALIDRYVNLIDSKSGGGFLSALRKRDYADWSDDERLVVAALHALFLSGR SVRFEEFNGAMLSARDVVGRLNQLSDSYTKAGCEVAVPAELDLFERAALIREQTLCAIGKPWLRYRWIYGLNFQKTERIL DSTASTEAADQWYREFGEDFRGLVSPHGEFQPPEYVAMALLANAAIARDVAGIGCDAGSPAVTSWTEYLIEKTVASAVLA TRSDYGMSSSLRDIGQLVSYDEATLIDTIHALTPASFFTAYVSHRTVERYGEAESAVIASSVQKRMQFNRWHFIPGNLDR PLVRQSRHWYYPPLVPDISAHSDMHRAAHNRARVKFSIRVPGPDMSRPPLNIAGRRYRGFYDVRVVRADGAEYGTEDMLR IRRRTLWLEALYTALANYLMTPDAKRLTIQGFAAGSYRNLAADRLPEPAVARAATIAEGSV >Mature_621_residues MDPRAHTPTQDHASHSLYGFDMTEYLRGESYAGRTAYDVALSAATHGGIYPLDQARLALGVPERAALAVLERHPELRVQA SAPAPADTTLRLYVNSLGRLHIRPAAEPKIAYDEADSWVELGFVDAGAAVLAAIEAEAEAWRAVERESMKEVRAALDRVH AEGQLPRVLDEVIDHVEHVESVCFYVGDRFFALIDRYVNLIDSKSGGGFLSALRKRDYADWSDDERLVVAALHALFLSGR SVRFEEFNGAMLSARDVVGRLNQLSDSYTKAGCEVAVPAELDLFERAALIREQTLCAIGKPWLRYRWIYGLNFQKTERIL DSTASTEAADQWYREFGEDFRGLVSPHGEFQPPEYVAMALLANAAIARDVAGIGCDAGSPAVTSWTEYLIEKTVASAVLA TRSDYGMSSSLRDIGQLVSYDEATLIDTIHALTPASFFTAYVSHRTVERYGEAESAVIASSVQKRMQFNRWHFIPGNLDR PLVRQSRHWYYPPLVPDISAHSDMHRAAHNRARVKFSIRVPGPDMSRPPLNIAGRRYRGFYDVRVVRADGAEYGTEDMLR IRRRTLWLEALYTALANYLMTPDAKRLTIQGFAAGSYRNLAADRLPEPAVARAATIAEGSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69072; Mature: 69072
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00131 CARBOXYPEPT_SER_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPRAHTPTQDHASHSLYGFDMTEYLRGESYAGRTAYDVALSAATHGGIYPLDQARLALG CCCCCCCCCCCCCCCCEECCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCC VPERAALAVLERHPELRVQASAPAPADTTLRLYVNSLGRLHIRPAAEPKIAYDEADSWVE CCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHEEHHCCCEEECCCCCCCEECCCCCCEEE LGFVDAGAAVLAAIEAEAEAWRAVERESMKEVRAALDRVHAEGQLPRVLDEVIDHVEHVE EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH SVCFYVGDRFFALIDRYVNLIDSKSGGGFLSALRKRDYADWSDDERLVVAALHALFLSGR HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC SVRFEEFNGAMLSARDVVGRLNQLSDSYTKAGCEVAVPAELDLFERAALIREQTLCAIGK CEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHCC PWLRYRWIYGLNFQKTERILDSTASTEAADQWYREFGEDFRGLVSPHGEFQPPEYVAMAL HHHHEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LANAAIARDVAGIGCDAGSPAVTSWTEYLIEKTVASAVLATRSDYGMSSSLRDIGQLVSY HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC DEATLIDTIHALTPASFFTAYVSHRTVERYGEAESAVIASSVQKRMQFNRWHFIPGNLDR CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEECCCCCCC PLVRQSRHWYYPPLVPDISAHSDMHRAAHNRARVKFSIRVPGPDMSRPPLNIAGRRYRGF HHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCE YDVRVVRADGAEYGTEDMLRIRRRTLWLEALYTALANYLMTPDAKRLTIQGFAAGSYRNL EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHH AADRLPEPAVARAATIAEGSV HHHCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MDPRAHTPTQDHASHSLYGFDMTEYLRGESYAGRTAYDVALSAATHGGIYPLDQARLALG CCCCCCCCCCCCCCCCEECCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCC VPERAALAVLERHPELRVQASAPAPADTTLRLYVNSLGRLHIRPAAEPKIAYDEADSWVE CCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHEEHHCCCEEECCCCCCCEECCCCCCEEE LGFVDAGAAVLAAIEAEAEAWRAVERESMKEVRAALDRVHAEGQLPRVLDEVIDHVEHVE EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH SVCFYVGDRFFALIDRYVNLIDSKSGGGFLSALRKRDYADWSDDERLVVAALHALFLSGR HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC SVRFEEFNGAMLSARDVVGRLNQLSDSYTKAGCEVAVPAELDLFERAALIREQTLCAIGK CEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHCC PWLRYRWIYGLNFQKTERILDSTASTEAADQWYREFGEDFRGLVSPHGEFQPPEYVAMAL HHHHEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LANAAIARDVAGIGCDAGSPAVTSWTEYLIEKTVASAVLATRSDYGMSSSLRDIGQLVSY HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC DEATLIDTIHALTPASFFTAYVSHRTVERYGEAESAVIASSVQKRMQFNRWHFIPGNLDR CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEECCCCCCC PLVRQSRHWYYPPLVPDISAHSDMHRAAHNRARVKFSIRVPGPDMSRPPLNIAGRRYRGF HHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCE YDVRVVRADGAEYGTEDMLRIRRRTLWLEALYTALANYLMTPDAKRLTIQGFAAGSYRNL EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHH AADRLPEPAVARAATIAEGSV HHHCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA