| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027264
Identifier: 238027264
GI number: 238027264
Start: 1812578
End: 1813411
Strand: Reverse
Name: 238027264
Synonym: bglu_1g16510
Alternate gene names: NA
Gene position: 1813411-1812578 (Counterclockwise)
Preceding gene: 238027265
Following gene: 238027263
Centisome position: 46.42
GC content: 74.46
Gene sequence:
>834_bases ATGAGCACGCTGCTGCAGGTTTCCGATCCGCATTTCGGCGCCGAATGGCCGGCCGCCGTCGATGCGCTGGTGGCGCTCGT GACCACGCTGCGCCCGGACCTCGTGGTGCTGTCGGGCGACCTGACGCAGCGCGCGCGCCGCCGCCAGTTCGACGCGGCGC GCGCGTTCGTCGACCGGCTCGGCCCGCAGGCGCTGCTGGCCATTCCCGGCAATCACGACATACCGCTCTTCGACCCGTTC GCGCGGCTGTGGCGCCCCTACGCGCGCTACCGGCACGCGTTCGGCGCGGACCTGGAGCCGGTGTTCGACGCGCCGACGCT GCTGGTCCAAGGCGTGAACACGACGCGGCCCGCGCGCCACACGGCGGGCGAAATCTCGGCCGCGCAGATCGAGCGCGTCG CGCGGCGCTTCGAACTGGCCCGGCCGGCACAGCTGCGCGTGGCGGTCGTGCATCAGCCGATCGCCACCGCCGGGCCGAGC AAGCGCCACGACCGCCTGCACGGCGCCGAAGCCGCGTTGCGCCGCTGGGCCGATGCCGGCGTCGACCTGGTCCTCGGCGG CCATACGCATCGGCCGGAAATCAACGCGGTGGCGGTGGCGGGCTCGACGCGCAAGGTCTACGCGATCCAGGGCGGCACCG CCGTGTCGTGGCGCGTGCGCGACGGGCAGCCGAACTCGGTCAACCTGATCGCCTATGACCACGCCGGCGAAGGCGCGCGC CGGGCGCGTGTCACGCGTTACGAACACGACGCGGCCGGCGGCCGGTTCGTCGCGGGCGAGCCGCGCGTGCTCGATCTCAC GCCGGCCCATGCCGCGGCGCCCGCGCCGCGCTGA
Upstream 100 bases:
>100_bases GCGAGATCGCCTGGCTCGACCTGCCGCTCGAGTTTCGCCTGGCCGACCGGCCGCTGCGCCTGCTCAAGCCCGAGCCCGAC GTCGCCGAGCGCAACCGCGC
Downstream 100 bases:
>100_bases GGACACGACCGTCCCGCCCGTGTCCGCGCGTTATTCCCGCCGCGAGCGAAGGCGTGGCGGCGGGCGGCGCCGGCTGTGCG CCCGCCCCTTCGTTGAATTT
Product: metallophosphoesterase
Products: NA
Alternate protein names: Phosphohydrolase; 3 5'-Cyclic-Nucleotide Phosphodiesterase; DNA Repair Exonuclease; Ser/Thr Protein Phosphatase Family Protein; 3 5'-Cyclic-Nucleotide Phosphodiesterase CpdA-Like Protein; 3 5-Cyclic-Nucleotide Phosphodiesterase CpdA-Like Protein; Metallo-Phosphoesterase; Calcineurin-Like Phosphoesterase Family; Transcriptional Regulator Icc Related Protein; Metallophosphoesterase Protein; Phosphodiesterase
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSTLLQVSDPHFGAEWPAAVDALVALVTTLRPDLVVLSGDLTQRARRRQFDAARAFVDRLGPQALLAIPGNHDIPLFDPF ARLWRPYARYRHAFGADLEPVFDAPTLLVQGVNTTRPARHTAGEISAAQIERVARRFELARPAQLRVAVVHQPIATAGPS KRHDRLHGAEAALRRWADAGVDLVLGGHTHRPEINAVAVAGSTRKVYAIQGGTAVSWRVRDGQPNSVNLIAYDHAGEGAR RARVTRYEHDAAGGRFVAGEPRVLDLTPAHAAAPAPR
Sequences:
>Translated_277_residues MSTLLQVSDPHFGAEWPAAVDALVALVTTLRPDLVVLSGDLTQRARRRQFDAARAFVDRLGPQALLAIPGNHDIPLFDPF ARLWRPYARYRHAFGADLEPVFDAPTLLVQGVNTTRPARHTAGEISAAQIERVARRFELARPAQLRVAVVHQPIATAGPS KRHDRLHGAEAALRRWADAGVDLVLGGHTHRPEINAVAVAGSTRKVYAIQGGTAVSWRVRDGQPNSVNLIAYDHAGEGAR RARVTRYEHDAAGGRFVAGEPRVLDLTPAHAAAPAPR >Mature_276_residues STLLQVSDPHFGAEWPAAVDALVALVTTLRPDLVVLSGDLTQRARRRQFDAARAFVDRLGPQALLAIPGNHDIPLFDPFA RLWRPYARYRHAFGADLEPVFDAPTLLVQGVNTTRPARHTAGEISAAQIERVARRFELARPAQLRVAVVHQPIATAGPSK RHDRLHGAEAALRRWADAGVDLVLGGHTHRPEINAVAVAGSTRKVYAIQGGTAVSWRVRDGQPNSVNLIAYDHAGEGARR ARVTRYEHDAAGGRFVAGEPRVLDLTPAHAAAPAPR
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30067; Mature: 29936
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLLQVSDPHFGAEWPAAVDALVALVTTLRPDLVVLSGDLTQRARRRQFDAARAFVDRL CCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHC GPQALLAIPGNHDIPLFDPFARLWRPYARYRHAFGADLEPVFDAPTLLVQGVNTTRPARH CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEECCCCCCCCHH TAGEISAAQIERVARRFELARPAQLRVAVVHQPIATAGPSKRHDRLHGAEAALRRWADAG CCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCHHCCCCCHHHHHHHHHHHHHHHHHHCC VDLVLGGHTHRPEINAVAVAGSTRKVYAIQGGTAVSWRVRDGQPNSVNLIAYDHAGEGAR CEEEECCCCCCCCCCEEEEECCCEEEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCHH RARVTRYEHDAAGGRFVAGEPRVLDLTPAHAAAPAPR HHHHEEECCCCCCCEEECCCCEEEEECCCCCCCCCCC >Mature Secondary Structure STLLQVSDPHFGAEWPAAVDALVALVTTLRPDLVVLSGDLTQRARRRQFDAARAFVDRL CCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHC GPQALLAIPGNHDIPLFDPFARLWRPYARYRHAFGADLEPVFDAPTLLVQGVNTTRPARH CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEECCCCCCCCHH TAGEISAAQIERVARRFELARPAQLRVAVVHQPIATAGPSKRHDRLHGAEAALRRWADAG CCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCHHCCCCCHHHHHHHHHHHHHHHHHHCC VDLVLGGHTHRPEINAVAVAGSTRKVYAIQGGTAVSWRVRDGQPNSVNLIAYDHAGEGAR CEEEECCCCCCCCCCEEEEECCCEEEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCHH RARVTRYEHDAAGGRFVAGEPRVLDLTPAHAAAPAPR HHHHEEECCCCCCCEEECCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA