| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027247
Identifier: 238027247
GI number: 238027247
Start: 1793532
End: 1793813
Strand: Direct
Name: 238027247
Synonym: bglu_1g16340
Alternate gene names: NA
Gene position: 1793532-1793813 (Clockwise)
Preceding gene: 238027246
Following gene: 238027248
Centisome position: 45.91
GC content: 52.13
Gene sequence:
>282_bases ATGGCACTACCTATCATCGTGGTCGGAGATACGACATCACATGGGGGGCGCGTGATTAGCGGATCGGATATCCATACGAT TGGAGGTAAGGCGATTGCTCGTCTGCATGATCTCGTTGATTGCCCAGAGAAATATCCCGATGGCAAATCGCACGGCATTA ACAAGATCATTGAGGCGCATCCGACGTTGACAATTGGCGGCGAGCGTGTGGCGCTACATGGTCATCACACCGAATGCGGT TGCATATTGATTGGCAGTACCGCTACACAGGTTGGAGACTAG
Upstream 100 bases:
>100_bases TTATCCAGAAGAAGACTCCAATCAAGAAGGCGATTGATGTACGCGTGCGTCTATCCAGGCAACACGCGTAAATTTGTTCT CAATTTTGTCGAGGGGTAAG
Downstream 100 bases:
>100_bases TGCCAGCCCTGCGATCGGCTTAGGTCGGATTTACGTGCCGGATTGGGAATCGTGAGCAGGTGTGCGATCCCGATCCGGTA TGGCGTCCGGCCTCCAGGAC
Product: PAAR repeat-containing protein
Products: NA
Alternate protein names: Paar Repeat-Containing Protein
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MALPIIVVGDTTSHGGRVISGSDIHTIGGKAIARLHDLVDCPEKYPDGKSHGINKIIEAHPTLTIGGERVALHGHHTECG CILIGSTATQVGD
Sequences:
>Translated_93_residues MALPIIVVGDTTSHGGRVISGSDIHTIGGKAIARLHDLVDCPEKYPDGKSHGINKIIEAHPTLTIGGERVALHGHHTECG CILIGSTATQVGD >Mature_92_residues ALPIIVVGDTTSHGGRVISGSDIHTIGGKAIARLHDLVDCPEKYPDGKSHGINKIIEAHPTLTIGGERVALHGHHTECGC ILIGSTATQVGD
Specific function: Unknown
COG id: COG4104
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9639; Mature: 9508
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPIIVVGDTTSHGGRVISGSDIHTIGGKAIARLHDLVDCPEKYPDGKSHGINKIIEAH CCCEEEEECCCCCCCCEEEECCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCC PTLTIGGERVALHGHHTECGCILIGSTATQVGD CCEEECCCEEEEECCCCCCCEEEECCCCCCCCC >Mature Secondary Structure ALPIIVVGDTTSHGGRVISGSDIHTIGGKAIARLHDLVDCPEKYPDGKSHGINKIIEAH CCEEEEECCCCCCCCEEEECCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCC PTLTIGGERVALHGHHTECGCILIGSTATQVGD CCEEECCCEEEEECCCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA