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The map label for this gene is yrpB [H]

Identifier: 238027218

GI number: 238027218

Start: 1756228

End: 1757418

Strand: Direct

Name: yrpB [H]

Synonym: bglu_1g16040

Alternate gene names: 238027218

Gene position: 1756228-1757418 (Clockwise)

Preceding gene: 238027217

Following gene: 238027219

Centisome position: 44.96

GC content: 69.52

Gene sequence:

>1191_bases
ATGACCATTTCCAGTTCCTTTCCGCCGCTCATGATCCGCGGCCGTGCGCTGCTGCCCATCGTGCAGGGCGGCATGGGTAT
CGGCATTTCTGCGCACCGGCTGGCCGGCAGCGTCGCGCGGGAGGGAGCGCTCGGCACGATCGCGAGCATCGATCTGCGGC
ACCACCATGCCGATCTGCTCGAACGCTGCCGGGCCAACCCCGTGCGCGACACCTTCGATGCCGCGAACCTCGAGGCGCTG
CGCCGCGAGATCAGCCGCGCCCGCACCTGGAGCGAGGGCCGCGGGATGATCGCAGTCAACGTGATGAAGGCGGTGCGCGC
GCATGCCGACTACGTACGCGTGGCCTGCGAAGCGGGCGCCGATGCGATCGTGATGGGTGCGGGCCTGCCGCTCGATCTGC
CCGACATGACCGAAGGCCACGACATCGCCCTGGTCCCGATCCTGTCCGACAGCCGCGGCATCGCGCTGGTGCTGAAGAAA
TGGATGAAGAAGGGACGCCTGCCCGACGCGATCGTGATCGAGCATCCGGCGCATGCGGGCGGCCATCTCGGCGTCGGCAA
CATCGAGGAGATGCACGACGCGCGCTTCTCGTTCGCGCGCGTGCTGGAGGAGGCGAGCGAGGCGATCCGCGCGCTCGGGC
TCGCCCGCGAATCGATCCCGCTGATCGTGGCGGGCGGCATCAACAGCCATGAAGCGGTGCGCGCGGCGCTGGCGCTCGGC
GCGAACGGCGTGCAGCTCGGCACGCCGTTCGCCGTCACCGAGGAAGGCGATGCGCATCCGGCCTTCAAGCACGTGCTCAC
GCACGCGCAGCCCGAGGACATCGTCGAATTCGTCAGCGTGACCGGGCTGCCGGCGCGTGCCGTGCGCACGCCCTGGCTCG
ATCGCTATCTGCGCCACGAGGCCCGCATTCGCGCCAAGCTCGGCGCGTTCCGGCAGCGCTGCCCAACCGCGTTCGAATGC
CTGTCCGTGTGCGGCTTGCGCGACGGCGTCGAACGCTTCGGACACTTCTGCATCGATACGCGGCTTGCCGCCGCGTTGCG
CGGCGACGTGGCCAACGGCCTGTTCTTCCGCGGCCGCGAGGCGCTGCCGTTCGGCGAGGCGATCCGCAGCGTGCGCGATC
TGCTCGCGTTGTTGCTGACCGGCGCGGCACCCGAGTCTGCGACAAACCGCCCCATGTTCTCTCTGGCTTGA

Upstream 100 bases:

>100_bases
GCGAGCGCGCCGCGCCGGCGCCTTGAGTTTGACGCGCATCAACCTCTGTATTTCCCGATCCCCGATCATCAAAGCTTTCG
ACACGTTCGACGAGTTTTCG

Downstream 100 bases:

>100_bases
TGAGCATCAACTTGACGCGCTCGCCGGCCCCTGACAATCACTACCGTTCCAAGGGGGTTATTGCCATGAAAGAAAAAATT
CGCTGTCTGGTTTCAGCCAT

Product: 2-nitropropane dioxygenase family oxidoreductase

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MTISSSFPPLMIRGRALLPIVQGGMGIGISAHRLAGSVAREGALGTIASIDLRHHHADLLERCRANPVRDTFDAANLEAL
RREISRARTWSEGRGMIAVNVMKAVRAHADYVRVACEAGADAIVMGAGLPLDLPDMTEGHDIALVPILSDSRGIALVLKK
WMKKGRLPDAIVIEHPAHAGGHLGVGNIEEMHDARFSFARVLEEASEAIRALGLARESIPLIVAGGINSHEAVRAALALG
ANGVQLGTPFAVTEEGDAHPAFKHVLTHAQPEDIVEFVSVTGLPARAVRTPWLDRYLRHEARIRAKLGAFRQRCPTAFEC
LSVCGLRDGVERFGHFCIDTRLAAALRGDVANGLFFRGREALPFGEAIRSVRDLLALLLTGAAPESATNRPMFSLA

Sequences:

>Translated_396_residues
MTISSSFPPLMIRGRALLPIVQGGMGIGISAHRLAGSVAREGALGTIASIDLRHHHADLLERCRANPVRDTFDAANLEAL
RREISRARTWSEGRGMIAVNVMKAVRAHADYVRVACEAGADAIVMGAGLPLDLPDMTEGHDIALVPILSDSRGIALVLKK
WMKKGRLPDAIVIEHPAHAGGHLGVGNIEEMHDARFSFARVLEEASEAIRALGLARESIPLIVAGGINSHEAVRAALALG
ANGVQLGTPFAVTEEGDAHPAFKHVLTHAQPEDIVEFVSVTGLPARAVRTPWLDRYLRHEARIRAKLGAFRQRCPTAFEC
LSVCGLRDGVERFGHFCIDTRLAAALRGDVANGLFFRGREALPFGEAIRSVRDLLALLLTGAAPESATNRPMFSLA
>Mature_395_residues
TISSSFPPLMIRGRALLPIVQGGMGIGISAHRLAGSVAREGALGTIASIDLRHHHADLLERCRANPVRDTFDAANLEALR
REISRARTWSEGRGMIAVNVMKAVRAHADYVRVACEAGADAIVMGAGLPLDLPDMTEGHDIALVPILSDSRGIALVLKKW
MKKGRLPDAIVIEHPAHAGGHLGVGNIEEMHDARFSFARVLEEASEAIRALGLARESIPLIVAGGINSHEAVRAALALGA
NGVQLGTPFAVTEEGDAHPAFKHVLTHAQPEDIVEFVSVTGLPARAVRTPWLDRYLRHEARIRAKLGAFRQRCPTAFECL
SVCGLRDGVERFGHFCIDTRLAAALRGDVANGLFFRGREALPFGEAIRSVRDLLALLLTGAAPESATNRPMFSLA

Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 42543; Mature: 42412

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISSSFPPLMIRGRALLPIVQGGMGIGISAHRLAGSVAREGALGTIASIDLRHHHADLL
CCCCCCCCCCEECCCEEHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ERCRANPVRDTFDAANLEALRREISRARTWSEGRGMIAVNVMKAVRAHADYVRVACEAGA
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCC
DAIVMGAGLPLDLPDMTEGHDIALVPILSDSRGIALVLKKWMKKGRLPDAIVIEHPAHAG
CEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCC
GHLGVGNIEEMHDARFSFARVLEEASEAIRALGLARESIPLIVAGGINSHEAVRAALALG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHC
ANGVQLGTPFAVTEEGDAHPAFKHVLTHAQPEDIVEFVSVTGLPARAVRTPWLDRYLRHE
CCCCCCCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHH
ARIRAKLGAFRQRCPTAFECLSVCGLRDGVERFGHFCIDTRLAAALRGDVANGLFFRGRE
HHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC
ALPFGEAIRSVRDLLALLLTGAAPESATNRPMFSLA
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TISSSFPPLMIRGRALLPIVQGGMGIGISAHRLAGSVAREGALGTIASIDLRHHHADLL
CCCCCCCCCEECCCEEHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ERCRANPVRDTFDAANLEALRREISRARTWSEGRGMIAVNVMKAVRAHADYVRVACEAGA
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCC
DAIVMGAGLPLDLPDMTEGHDIALVPILSDSRGIALVLKKWMKKGRLPDAIVIEHPAHAG
CEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCC
GHLGVGNIEEMHDARFSFARVLEEASEAIRALGLARESIPLIVAGGINSHEAVRAALALG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHC
ANGVQLGTPFAVTEEGDAHPAFKHVLTHAQPEDIVEFVSVTGLPARAVRTPWLDRYLRHE
CCCCCCCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHH
ARIRAKLGAFRQRCPTAFECLSVCGLRDGVERFGHFCIDTRLAAALRGDVANGLFFRGRE
HHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC
ALPFGEAIRSVRDLLALLLTGAAPESATNRPMFSLA
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]