| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027200
Identifier: 238027200
GI number: 238027200
Start: 1735512
End: 1736150
Strand: Direct
Name: 238027200
Synonym: bglu_1g15860
Alternate gene names: NA
Gene position: 1735512-1736150 (Clockwise)
Preceding gene: 238027198
Following gene: 238027201
Centisome position: 44.43
GC content: 67.29
Gene sequence:
>639_bases ATGACGACGAGATGCAGTCACGGCGCGCCGCTCGAGCGCGCCTGCCAGCAGTGCTCAGCCGAAGGCTTGGCGGCGCTGCC GAAGATCACCGGCGAGCACGCGGTGCGCGTGACCGATGTCGAGGTCGAGTATTACCCGAACCACGCGGCGCCGCGCGCCG AGTCGGCGACGTTCCGGCGCACGAAACGGGAAGGGCATGCGGCCGGGCTGCGCTGCGCCATCAGTGGCCAGCCCGCGCCC GAGTACCACCACCTGTTCTGCGAATGGGCCGACGCGGATGCCGTCGACTGGGTGATTGTGAAGGCGATCGCGGTCGGCGA AATCACCGAGATCCCGGTGCTGGACCTGGTCACCGACCAGCCGACCGGCGAGACCTTCCCCGCCAAGCAGTCGCTGATCT GGTTGATCTGCAAGCTCGCCGAGCTGCGCGGCTTCGACTGGCATGCATTCGATCCGGCCGACCCGTCCACCTTCGTCGAC GGCCTGCCGAACATGCTGCCGCTCGTCGCGAAGTTCCACCGCTCGCCCACGCACGGCATCCATCACCGCTCGTTCCCGAC CTACGTTTTCCAGGCGTACCCGCGCAAGGCTGGGTTCGTCTTCACCCCGGACGAGATCGTCCAGCTCAAGAAGGAGTAG
Upstream 100 bases:
>100_bases ATATCCGATGTTTTGCCAATGATGTTTACAAGTTACTTGGCGTACTTTCATCATCAATTAGCCCGGCCGCGCGCCGGGCT TTTTCTTTCCCGGATTTCCC
Downstream 100 bases:
>100_bases GCCATGCCCATGAAGTCCAGCCTCGTGACCGGCGGCATCACCATCGGCGTCACCGACCTCGTTCCGACCGTCGACTGGGT GCTCGGCGGCTGCCGGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTTRCSHGAPLERACQQCSAEGLAALPKITGEHAVRVTDVEVEYYPNHAAPRAESATFRRTKREGHAAGLRCAISGQPAP EYHHLFCEWADADAVDWVIVKAIAVGEITEIPVLDLVTDQPTGETFPAKQSLIWLICKLAELRGFDWHAFDPADPSTFVD GLPNMLPLVAKFHRSPTHGIHHRSFPTYVFQAYPRKAGFVFTPDEIVQLKKE
Sequences:
>Translated_212_residues MTTRCSHGAPLERACQQCSAEGLAALPKITGEHAVRVTDVEVEYYPNHAAPRAESATFRRTKREGHAAGLRCAISGQPAP EYHHLFCEWADADAVDWVIVKAIAVGEITEIPVLDLVTDQPTGETFPAKQSLIWLICKLAELRGFDWHAFDPADPSTFVD GLPNMLPLVAKFHRSPTHGIHHRSFPTYVFQAYPRKAGFVFTPDEIVQLKKE >Mature_211_residues TTRCSHGAPLERACQQCSAEGLAALPKITGEHAVRVTDVEVEYYPNHAAPRAESATFRRTKREGHAAGLRCAISGQPAPE YHHLFCEWADADAVDWVIVKAIAVGEITEIPVLDLVTDQPTGETFPAKQSLIWLICKLAELRGFDWHAFDPADPSTFVDG LPNMLPLVAKFHRSPTHGIHHRSFPTYVFQAYPRKAGFVFTPDEIVQLKKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23555; Mature: 23424
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRCSHGAPLERACQQCSAEGLAALPKITGEHAVRVTDVEVEYYPNHAAPRAESATFRR CCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHH TKREGHAAGLRCAISGQPAPEYHHLFCEWADADAVDWVIVKAIAVGEITEIPVLDLVTDQ HHHCCCCCCEEEEECCCCCCCHHEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCC PTGETFPAKQSLIWLICKLAELRGFDWHAFDPADPSTFVDGLPNMLPLVAKFHRSPTHGI CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCC HHRSFPTYVFQAYPRKAGFVFTPDEIVQLKKE CCCCCCHHHHHHCCCCCCEEECHHHHHHCCCC >Mature Secondary Structure TTRCSHGAPLERACQQCSAEGLAALPKITGEHAVRVTDVEVEYYPNHAAPRAESATFRR CCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHH TKREGHAAGLRCAISGQPAPEYHHLFCEWADADAVDWVIVKAIAVGEITEIPVLDLVTDQ HHHCCCCCCEEEEECCCCCCCHHEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCC PTGETFPAKQSLIWLICKLAELRGFDWHAFDPADPSTFVDGLPNMLPLVAKFHRSPTHGI CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCC HHRSFPTYVFQAYPRKAGFVFTPDEIVQLKKE CCCCCCHHHHHHCCCCCCEEECHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA