| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238027188
Identifier: 238027188
GI number: 238027188
Start: 1724731
End: 1725048
Strand: Direct
Name: 238027188
Synonym: bglu_1g15740
Alternate gene names: NA
Gene position: 1724731-1725048 (Clockwise)
Preceding gene: 238027187
Following gene: 238027190
Centisome position: 44.15
GC content: 62.26
Gene sequence:
>318_bases ATGGCGACGACCTTCTACGAAATCCCGCTCACGCCGGACCCGCAGACCTTCACGATCACGCTCAGCGGTGTGGTGTACCA ACTCACGCTTCAGTATCGCAATGCGGGCGGCACTGGCTGGATCCTCGATATCGCGGACGCGAGCGGCAACGCCATGGTCA ACGGCATTCCTCTGGTCACCGGGGTGGATCTGCTGGGCCAGTACGGGTATCTCGGGTTTGGCGGGCGCCTCTGGGTGCAG GGCGCCGACAACCCCGACAATGTGCCGACCTTCGATGACTTGGGCCTCGGCTCACACGTTTTTTGGGCTGTAAGCTAG
Upstream 100 bases:
>100_bases AACCCGGCCGCAACCGCTGAGACGCAGAGCGCCGGCGCGAAGTCGGCCACGCCGGCGACGCCGGCCCCGGGCGGCTCGGT ATCACCGTCCTGAGACGCAG
Downstream 100 bases:
>100_bases TCCGGTATTACCGTCTCTGCGTAACACCTGCACGGCTGGTCCGTGGAACATAGGTGAAACCCTGGGTGTCCGATTGATGG GGATCTTTTCCAAGAAAAAC
Product: putative bacteriophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MATTFYEIPLTPDPQTFTITLSGVVYQLTLQYRNAGGTGWILDIADASGNAMVNGIPLVTGVDLLGQYGYLGFGGRLWVQ GADNPDNVPTFDDLGLGSHVFWAVS
Sequences:
>Translated_105_residues MATTFYEIPLTPDPQTFTITLSGVVYQLTLQYRNAGGTGWILDIADASGNAMVNGIPLVTGVDLLGQYGYLGFGGRLWVQ GADNPDNVPTFDDLGLGSHVFWAVS >Mature_104_residues ATTFYEIPLTPDPQTFTITLSGVVYQLTLQYRNAGGTGWILDIADASGNAMVNGIPLVTGVDLLGQYGYLGFGGRLWVQG ADNPDNVPTFDDLGLGSHVFWAVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11213; Mature: 11082
Theoretical pI: Translated: 3.71; Mature: 3.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTFYEIPLTPDPQTFTITLSGVVYQLTLQYRNAGGTGWILDIADASGNAMVNGIPLVT CCCEEEECCCCCCCCEEEEEECCEEEEEEEEEECCCCCEEEEEEECCCCCEEECCCCEEE GVDLLGQYGYLGFGGRLWVQGADNPDNVPTFDDLGLGSHVFWAVS CHHHHCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure ATTFYEIPLTPDPQTFTITLSGVVYQLTLQYRNAGGTGWILDIADASGNAMVNGIPLVT CCEEEECCCCCCCCEEEEEECCEEEEEEEEEECCCCCEEEEEEECCCCCEEECCCCEEE GVDLLGQYGYLGFGGRLWVQGADNPDNVPTFDDLGLGSHVFWAVS CHHHHCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA