| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027190
Identifier: 238027190
GI number: 238027190
Start: 1725497
End: 1726480
Strand: Direct
Name: 238027190
Synonym: bglu_1g15760
Alternate gene names: NA
Gene position: 1725497-1726480 (Clockwise)
Preceding gene: 238027188
Following gene: 238027191
Centisome position: 44.17
GC content: 54.37
Gene sequence:
>984_bases ATGGGTGCGGTTCAGTTTGGCCGAAAAATTTCCCTGATCATTGGTCCCGATTCTGGGAATGCTCTCGACCTGTCGGCGCT CCGCATCGTGTTCCATGTGAGGCGCGGCGACACGCAGACGCCGAACTCGCTCCGCGTGCGCGTGTACAACGTCTCCGATA ATACGTCCCAGAGCGCCGAGAGCAAGGAATTCACCAGGATCGTGCTGCAAGCTGGCTACGAGGGCAGCTACGGCATTATC TTCGATGGCTCTATCGTCCAAGTGCGGCGGGGGCGCGAGAACGCGACCGATACCTATCTGGACATCACTGCCGCCGACGG CGACATGGCCTACAACTTCGCGTTCGTGAACACGACTCTAGCGGCCGGCGCGACGCAGGCTGACGTGGTTAATGCATGCG CTCAGGCCATGGCCTCTTATGGCGTGACGGTCGGCTATATCCCGGATCTGCCCGCCAATCTGTTGCCTCGCGGCAGGGTG CTTTTCGGGCTGGCGCGCGACCATCTGGAAGTCGTGGCCAAGACCACGCAGACGCTTTGGTCTATTCAGGACGGGAAACT TCAGATCGTCCCTGAAACGTCATACGTTCCAGGTGATGTTCCGGTGATAGATCGCAAGTCCGGAATGGTAGGAATGCCGG AGCAGACTCAGAATGGGATCAAGGTTCGGATGCTGCTTAATCCATCGATTAAAATAGGTAGATTGATAAAGCTTGATAAT TCTAGTATTCAGCAGTATGAGTACAGCTTGGATTTTCAGCAGCAAGCATCAAACGGATTTATTCGGCGGCAGAATAAAAT AAATGGCGATGGTTTTTATTACGTCATGTATAACGAGATGTGGGGCGATACGAGAGGCAATGACTGGTATACCGAAGTGA TTTGTATATCTGTCGATGTTACAGCCGGCCTCGAATTGTCTGAAAGCGCAAGCGGCGCCAGTGCTCCAGCGCCGGCAAAG CTAGGCGTAGTCTCAACCACCTAA
Upstream 100 bases:
>100_bases CGTGTGCGCCGTCTGTAGCGCAATGAAAGATCGATCGCTATGACGATAGCTGCTAGCAAAAAGAGAATTTTGTTCATAAC GATTCGTAAAGGGTGGAATC
Downstream 100 bases:
>100_bases CGTAGGGAATTCGCATACCCTCGCAGATTTTCGTCAAATTGTTGTTGGGTCATTGCGGGGCCGATCACCTTTGCATCGCC GTTTGGCAGTAATGATGCCT
Product: putative bacteriophage protein
Products: NA
Alternate protein names: Hydrolase
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MGAVQFGRKISLIIGPDSGNALDLSALRIVFHVRRGDTQTPNSLRVRVYNVSDNTSQSAESKEFTRIVLQAGYEGSYGII FDGSIVQVRRGRENATDTYLDITAADGDMAYNFAFVNTTLAAGATQADVVNACAQAMASYGVTVGYIPDLPANLLPRGRV LFGLARDHLEVVAKTTQTLWSIQDGKLQIVPETSYVPGDVPVIDRKSGMVGMPEQTQNGIKVRMLLNPSIKIGRLIKLDN SSIQQYEYSLDFQQQASNGFIRRQNKINGDGFYYVMYNEMWGDTRGNDWYTEVICISVDVTAGLELSESASGASAPAPAK LGVVSTT
Sequences:
>Translated_327_residues MGAVQFGRKISLIIGPDSGNALDLSALRIVFHVRRGDTQTPNSLRVRVYNVSDNTSQSAESKEFTRIVLQAGYEGSYGII FDGSIVQVRRGRENATDTYLDITAADGDMAYNFAFVNTTLAAGATQADVVNACAQAMASYGVTVGYIPDLPANLLPRGRV LFGLARDHLEVVAKTTQTLWSIQDGKLQIVPETSYVPGDVPVIDRKSGMVGMPEQTQNGIKVRMLLNPSIKIGRLIKLDN SSIQQYEYSLDFQQQASNGFIRRQNKINGDGFYYVMYNEMWGDTRGNDWYTEVICISVDVTAGLELSESASGASAPAPAK LGVVSTT >Mature_326_residues GAVQFGRKISLIIGPDSGNALDLSALRIVFHVRRGDTQTPNSLRVRVYNVSDNTSQSAESKEFTRIVLQAGYEGSYGIIF DGSIVQVRRGRENATDTYLDITAADGDMAYNFAFVNTTLAAGATQADVVNACAQAMASYGVTVGYIPDLPANLLPRGRVL FGLARDHLEVVAKTTQTLWSIQDGKLQIVPETSYVPGDVPVIDRKSGMVGMPEQTQNGIKVRMLLNPSIKIGRLIKLDNS SIQQYEYSLDFQQQASNGFIRRQNKINGDGFYYVMYNEMWGDTRGNDWYTEVICISVDVTAGLELSESASGASAPAPAKL GVVSTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35573; Mature: 35441
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAVQFGRKISLIIGPDSGNALDLSALRIVFHVRRGDTQTPNSLRVRVYNVSDNTSQSAE CCCCCCCCEEEEEEECCCCCEEEHEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCH SKEFTRIVLQAGYEGSYGIIFDGSIVQVRRGRENATDTYLDITAADGDMAYNFAFVNTTL HHHHHEEEEECCCCCCEEEEECCCEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEEEEE AAGATQADVVNACAQAMASYGVTVGYIPDLPANLLPRGRVLFGLARDHLEVVAKTTQTLW CCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHE SIQDGKLQIVPETSYVPGDVPVIDRKSGMVGMPEQTQNGIKVRMLLNPSIKIGRLIKLDN EECCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECC SSIQQYEYSLDFQQQASNGFIRRQNKINGDGFYYVMYNEMWGDTRGNDWYTEVICISVDV CCCEEEEEECCHHHHHCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEE TAGLELSESASGASAPAPAKLGVVSTT ECCCEECCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure GAVQFGRKISLIIGPDSGNALDLSALRIVFHVRRGDTQTPNSLRVRVYNVSDNTSQSAE CCCCCCCEEEEEEECCCCCEEEHEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCH SKEFTRIVLQAGYEGSYGIIFDGSIVQVRRGRENATDTYLDITAADGDMAYNFAFVNTTL HHHHHEEEEECCCCCCEEEEECCCEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEEEEE AAGATQADVVNACAQAMASYGVTVGYIPDLPANLLPRGRVLFGLARDHLEVVAKTTQTLW CCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHE SIQDGKLQIVPETSYVPGDVPVIDRKSGMVGMPEQTQNGIKVRMLLNPSIKIGRLIKLDN EECCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECC SSIQQYEYSLDFQQQASNGFIRRQNKINGDGFYYVMYNEMWGDTRGNDWYTEVICISVDV CCCEEEEEECCHHHHHCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEE TAGLELSESASGASAPAPAKLGVVSTT ECCCEECCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA