| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027181
Identifier: 238027181
GI number: 238027181
Start: 1718721
End: 1720532
Strand: Direct
Name: 238027181
Synonym: bglu_1g15670
Alternate gene names: NA
Gene position: 1718721-1720532 (Clockwise)
Preceding gene: 238027180
Following gene: 238027182
Centisome position: 44.0
GC content: 65.89
Gene sequence:
>1812_bases ATGGCAAAGGCTCTTCCGGTCGCCCGCCTCATCAGTGTCGCGGTCACGCTCACCGCGCTTGCTGCGCAGGGTGCGAACCT CAACACCGCGTTGCTGCTCGGCGCGTCGCCCGTCATCGATACGGGCGAGCGCATGCGCAGCTACGCCCAGATCACGGATG TCGCCAACGACTTCGGCACGACCGCGCCGGAATATCTGGCGGCACAGCTCTACTTCAACCAATCGCCGCAGCCGGCCAGC CTGCTGATCGGCCGGTGGGCGAAGACCGCCACGTCCGGCGTGCTGAACGGCGGCGTGTTGTCGACCAGCCAGCAGGCCAT CGCGCAATGGCAGGCGATCACGAACGGCGCGTTCAACATCACCATCGACGGAACGGTGCGGAATGTGTCCGCGCTGAACT TCTCGGGGGCATCGAATCTGAACGGCGTGGCATCGATCGTTCAGGCCGCGCTTGCATCGTATGCGACGGTCGTGTGGAAC GGCTCGAAGTTTCTGGTCACGAGCAAGTCGAGCGGCACCGGTGCGGCGGCGAGCGGCACCATTACGCTGACGGCCAATCC GGCCGCGAACGACACGGTCACCATCAACGGTACCGCGGTGACGTTCGTCGCGGCGGCGCCGTCGGGCAGCCAGGTGCTGA TCGGCGGTAGCGCGGCGGCGACCGCGGCCAACCTGCAGGCGTTCCTCGCCGCCTCGGCCGATGCGAACCTGTCGCAGTGC AGCTATTCGACGACTGGCGCTGTCACCACGGTGACCGCTATCGCTCTTGGCAATGCCGGCAACGCGATCACGCTGGCGAA GTCGAGCAGCGCCGTCACGCTCTCCGGGGCTACGCTCTCCGGTGGTGTCGCGGCTTCGACGGTCAGCTATGCGACGTCGC CGGGTACCGGTACCGACGTTTCCGCGATGCTGGGCCTGACGAGTTCTTCTGCGTCGGCACCCGTTGCGGGTATCGCGGCC GAGACGCCGGCCGCATGTGCCGCGCTGTTCCTCGACCAGTTCTCGAACCAGTTCCTCGGCATGGCGTTCGCCGATAGCAC GGTCGGCGATAGCGACCATATCGCCGTGGCGCAACTGATCGAGGCCGACCAGGCGCACCTCTATGGCGTCACGACGCAGA ACGCGCAGGCGCTCGCCCCGACCGTGACGAGCGATCTGGCGAGCCAGCTCAAGGCGCTGGCACTCAAGTACACGATGATC CAGTATTCCAGCACCAGCCCGTATGCTGTGGTGTCGGCGCTGGGCCGGCTGCTGACGGTCGACTTCAACGGCAACAGCAC CACGCTCACGCTGATGTTCAAGCAGGAGCCGGGCATCGTGGCCGAGGCGCTGACGTCCACGCAGGCCGACACGCTGCAGG CGAAGAACTGCAACGTCTACGTCGGCTACGACAACAACACGTCGATCCTGCAGTACGGCGTGACGCCGAGCGGCATCTTC GTCGATTCGGTCTACAACGCGCTCTGGTTCCGCAACGATATCCAGACGGCGGTCTACAACCTTCTATACACCAGCCCGAC GAAGATCCCGCAGACCGACGCCGGCAACGCGCAGATCGCCGCGACGATCTCGTCGGTGTGCGACCAGGCAGTGACGAACG GCTATCTCGCGCCCGGCACGTGGAACTCGGCCGGCTTCGGGGCGCTGGCGCAGGGCCAGGCGCTCTCGAAGGGCTACTAC ATCTACACGCCCCCGATCGCCTCGCAGTCGCAGGCCGATCGCGAGGCTCGCAAGTCGGTCGTATTCCAGATCGCCGCCAA GGAAGCCGGCGCGATCCATTCGGCCGACATCGCTGTCACCGTCAACCGCTAA
Upstream 100 bases:
>100_bases CCTACCCGGTCCTCAACCTGCTTTCCGCCTCGGTGACTTCGACGACTGATTCGTCGGCGCCGGTGGCGAGCACCACCACC ATTCACCAATAGAGGACCAC
Downstream 100 bases:
>100_bases CCGGAGCAACCCAGCATGAGCGGCACTTACAGCTTCATGGACGTCACGGCGACGCTGGTCGGACCGACTGGCGTCATCAC ACTCGGCTACGGCGAGGCCA
Product: putative exported phage protein
Products: NA
Alternate protein names: Exported Phage Protein
Number of amino acids: Translated: 603; Mature: 602
Protein sequence:
>603_residues MAKALPVARLISVAVTLTALAAQGANLNTALLLGASPVIDTGERMRSYAQITDVANDFGTTAPEYLAAQLYFNQSPQPAS LLIGRWAKTATSGVLNGGVLSTSQQAIAQWQAITNGAFNITIDGTVRNVSALNFSGASNLNGVASIVQAALASYATVVWN GSKFLVTSKSSGTGAAASGTITLTANPAANDTVTINGTAVTFVAAAPSGSQVLIGGSAAATAANLQAFLAASADANLSQC SYSTTGAVTTVTAIALGNAGNAITLAKSSSAVTLSGATLSGGVAASTVSYATSPGTGTDVSAMLGLTSSSASAPVAGIAA ETPAACAALFLDQFSNQFLGMAFADSTVGDSDHIAVAQLIEADQAHLYGVTTQNAQALAPTVTSDLASQLKALALKYTMI QYSSTSPYAVVSALGRLLTVDFNGNSTTLTLMFKQEPGIVAEALTSTQADTLQAKNCNVYVGYDNNTSILQYGVTPSGIF VDSVYNALWFRNDIQTAVYNLLYTSPTKIPQTDAGNAQIAATISSVCDQAVTNGYLAPGTWNSAGFGALAQGQALSKGYY IYTPPIASQSQADREARKSVVFQIAAKEAGAIHSADIAVTVNR
Sequences:
>Translated_603_residues MAKALPVARLISVAVTLTALAAQGANLNTALLLGASPVIDTGERMRSYAQITDVANDFGTTAPEYLAAQLYFNQSPQPAS LLIGRWAKTATSGVLNGGVLSTSQQAIAQWQAITNGAFNITIDGTVRNVSALNFSGASNLNGVASIVQAALASYATVVWN GSKFLVTSKSSGTGAAASGTITLTANPAANDTVTINGTAVTFVAAAPSGSQVLIGGSAAATAANLQAFLAASADANLSQC SYSTTGAVTTVTAIALGNAGNAITLAKSSSAVTLSGATLSGGVAASTVSYATSPGTGTDVSAMLGLTSSSASAPVAGIAA ETPAACAALFLDQFSNQFLGMAFADSTVGDSDHIAVAQLIEADQAHLYGVTTQNAQALAPTVTSDLASQLKALALKYTMI QYSSTSPYAVVSALGRLLTVDFNGNSTTLTLMFKQEPGIVAEALTSTQADTLQAKNCNVYVGYDNNTSILQYGVTPSGIF VDSVYNALWFRNDIQTAVYNLLYTSPTKIPQTDAGNAQIAATISSVCDQAVTNGYLAPGTWNSAGFGALAQGQALSKGYY IYTPPIASQSQADREARKSVVFQIAAKEAGAIHSADIAVTVNR >Mature_602_residues AKALPVARLISVAVTLTALAAQGANLNTALLLGASPVIDTGERMRSYAQITDVANDFGTTAPEYLAAQLYFNQSPQPASL LIGRWAKTATSGVLNGGVLSTSQQAIAQWQAITNGAFNITIDGTVRNVSALNFSGASNLNGVASIVQAALASYATVVWNG SKFLVTSKSSGTGAAASGTITLTANPAANDTVTINGTAVTFVAAAPSGSQVLIGGSAAATAANLQAFLAASADANLSQCS YSTTGAVTTVTAIALGNAGNAITLAKSSSAVTLSGATLSGGVAASTVSYATSPGTGTDVSAMLGLTSSSASAPVAGIAAE TPAACAALFLDQFSNQFLGMAFADSTVGDSDHIAVAQLIEADQAHLYGVTTQNAQALAPTVTSDLASQLKALALKYTMIQ YSSTSPYAVVSALGRLLTVDFNGNSTTLTLMFKQEPGIVAEALTSTQADTLQAKNCNVYVGYDNNTSILQYGVTPSGIFV DSVYNALWFRNDIQTAVYNLLYTSPTKIPQTDAGNAQIAATISSVCDQAVTNGYLAPGTWNSAGFGALAQGQALSKGYYI YTPPIASQSQADREARKSVVFQIAAKEAGAIHSADIAVTVNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61164; Mature: 61033
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKALPVARLISVAVTLTALAAQGANLNTALLLGASPVIDTGERMRSYAQITDVANDFGT CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC TAPEYLAAQLYFNQSPQPASLLIGRWAKTATSGVLNGGVLSTSQQAIAQWQAITNGAFNI CCHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHCCCEEEE TIDGTVRNVSALNFSGASNLNGVASIVQAALASYATVVWNGSKFLVTSKSSGTGAAASGT EECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCCCCCCCCE ITLTANPAANDTVTINGTAVTFVAAAPSGSQVLIGGSAAATAANLQAFLAASADANLSQC EEEEECCCCCCEEEECCEEEEEEEECCCCCEEEECCCHHHHHHHHHEEEEECCCCCHHHC SYSTTGAVTTVTAIALGNAGNAITLAKSSSAVTLSGATLSGGVAASTVSYATSPGTGTDV CCCCCCCCEEEEEEEECCCCCEEEEEECCCEEEEECCEECCCCCEEEEEECCCCCCCCCH SAMLGLTSSSASAPVAGIAAETPAACAALFLDQFSNQFLGMAFADSTVGDSDHIAVAQLI HHHEEECCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCHHHHHHH EADQAHLYGVTTQNAQALAPTVTSDLASQLKALALKYTMIQYSSTSPYAVVSALGRLLTV HCCCCEEEEEECCCCCHHCCHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHCCCEEEE DFNGNSTTLTLMFKQEPGIVAEALTSTQADTLQAKNCNVYVGYDNNTSILQYGVTPSGIF EECCCCEEEEEEEECCCCHHHHHHHCCCCHHEEECCCEEEEEECCCCCEEEECCCCCCEE VDSVYNALWFRNDIQTAVYNLLYTSPTKIPQTDAGNAQIAATISSVCDQAVTNGYLAPGT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCEECCCC WNSAGFGALAQGQALSKGYYIYTPPIASQSQADREARKSVVFQIAAKEAGAIHSADIAVT CCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHEEEEEECCCCCCEEECEEEEE VNR ECC >Mature Secondary Structure AKALPVARLISVAVTLTALAAQGANLNTALLLGASPVIDTGERMRSYAQITDVANDFGT CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC TAPEYLAAQLYFNQSPQPASLLIGRWAKTATSGVLNGGVLSTSQQAIAQWQAITNGAFNI CCHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHCCCEEEE TIDGTVRNVSALNFSGASNLNGVASIVQAALASYATVVWNGSKFLVTSKSSGTGAAASGT EECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCCCCCCCCE ITLTANPAANDTVTINGTAVTFVAAAPSGSQVLIGGSAAATAANLQAFLAASADANLSQC EEEEECCCCCCEEEECCEEEEEEEECCCCCEEEECCCHHHHHHHHHEEEEECCCCCHHHC SYSTTGAVTTVTAIALGNAGNAITLAKSSSAVTLSGATLSGGVAASTVSYATSPGTGTDV CCCCCCCCEEEEEEEECCCCCEEEEEECCCEEEEECCEECCCCCEEEEEECCCCCCCCCH SAMLGLTSSSASAPVAGIAAETPAACAALFLDQFSNQFLGMAFADSTVGDSDHIAVAQLI HHHEEECCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCHHHHHHH EADQAHLYGVTTQNAQALAPTVTSDLASQLKALALKYTMIQYSSTSPYAVVSALGRLLTV HCCCCEEEEEECCCCCHHCCHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHCCCEEEE DFNGNSTTLTLMFKQEPGIVAEALTSTQADTLQAKNCNVYVGYDNNTSILQYGVTPSGIF EECCCCEEEEEEEECCCCHHHHHHHCCCCHHEEECCCEEEEEECCCCCEEEECCCCCCEE VDSVYNALWFRNDIQTAVYNLLYTSPTKIPQTDAGNAQIAATISSVCDQAVTNGYLAPGT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCEECCCC WNSAGFGALAQGQALSKGYYIYTPPIASQSQADREARKSVVFQIAAKEAGAIHSADIAVT CCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHEEEEEECCCCCCEEECEEEEE VNR ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA