| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027182
Identifier: 238027182
GI number: 238027182
Start: 1720548
End: 1720991
Strand: Direct
Name: 238027182
Synonym: bglu_1g15680
Alternate gene names: NA
Gene position: 1720548-1720991 (Clockwise)
Preceding gene: 238027181
Following gene: 238027184
Centisome position: 44.04
GC content: 62.61
Gene sequence:
>444_bases ATGAGCGGCACTTACAGCTTCATGGACGTCACGGCGACGCTGGTCGGACCGACTGGCGTCATCACACTCGGCTACGGCGA GGCCACGGCCGAGGAAGGCATCACGATCGCGCGCGCGGGCGACGTCAATACGATGACGATCGGCTCGGACGGCGAGGGCA TGCATAGCCTGCACGCCGACAAATCCGGCCAGGTCACGATTCGCTATCTGAAGACCGCGCCGAACAACGCGAAGCTGATG GCGATGTACGACGCGCAGCGCCTGTCGAGCGCACTGTGGGGCAAGAACCTGATCGAGGTCGGCCAGACCGCCGCCGGCGA CGTCATCACGGCCCGGTCGTGCGCGTTCAAGAAGGTGCCGGACCTGAAGTATGCGAAGGAGGGTGACATCCTGGAGTGGG TGTTCGACGCTATTAAAATCGATTCGCTGCTCGGTCAATACTAG
Upstream 100 bases:
>100_bases TCGCAAGTCGGTCGTATTCCAGATCGCCGCCAAGGAAGCCGGCGCGATCCATTCGGCCGACATCGCTGTCACCGTCAACC GCTAACCGGAGCAACCCAGC
Downstream 100 bases:
>100_bases TCGTCTCGCGAGTGTGTGAGCTTCGCAAATTCTCGTCGCGCGAGAGTCGCGGCACCGCAAAATGCGGCGTATGCCTCGGC TTCAGTGTCGTAGGAGCCTA
Product: putative bacteriophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSGTYSFMDVTATLVGPTGVITLGYGEATAEEGITIARAGDVNTMTIGSDGEGMHSLHADKSGQVTIRYLKTAPNNAKLM AMYDAQRLSSALWGKNLIEVGQTAAGDVITARSCAFKKVPDLKYAKEGDILEWVFDAIKIDSLLGQY
Sequences:
>Translated_147_residues MSGTYSFMDVTATLVGPTGVITLGYGEATAEEGITIARAGDVNTMTIGSDGEGMHSLHADKSGQVTIRYLKTAPNNAKLM AMYDAQRLSSALWGKNLIEVGQTAAGDVITARSCAFKKVPDLKYAKEGDILEWVFDAIKIDSLLGQY >Mature_146_residues SGTYSFMDVTATLVGPTGVITLGYGEATAEEGITIARAGDVNTMTIGSDGEGMHSLHADKSGQVTIRYLKTAPNNAKLMA MYDAQRLSSALWGKNLIEVGQTAAGDVITARSCAFKKVPDLKYAKEGDILEWVFDAIKIDSLLGQY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15670; Mature: 15539
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTYSFMDVTATLVGPTGVITLGYGEATAEEGITIARAGDVNTMTIGSDGEGMHSLHAD CCCCCCCEEEEEEEECCCEEEEECCCCCHHHCCEEEEECCCCEEEEECCCCCCCCEECCC KSGQVTIRYLKTAPNNAKLMAMYDAQRLSSALWGKNLIEVGQTAAGDVITARSCAFKKVP CCCCEEEEEEEECCCCCEEEEEECHHHHHHHHCCCHHHHHCCCCCCCEEEECCCCCCCCC DLKYAKEGDILEWVFDAIKIDSLLGQY CCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SGTYSFMDVTATLVGPTGVITLGYGEATAEEGITIARAGDVNTMTIGSDGEGMHSLHAD CCCCCCEEEEEEEECCCEEEEECCCCCHHHCCEEEEECCCCEEEEECCCCCCCCEECCC KSGQVTIRYLKTAPNNAKLMAMYDAQRLSSALWGKNLIEVGQTAAGDVITARSCAFKKVP CCCCEEEEEEEECCCCCEEEEEECHHHHHHHHCCCHHHHHCCCCCCCEEEECCCCCCCCC DLKYAKEGDILEWVFDAIKIDSLLGQY CCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA