| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027175
Identifier: 238027175
GI number: 238027175
Start: 1715062
End: 1716162
Strand: Direct
Name: 238027175
Synonym: bglu_1g15610
Alternate gene names: NA
Gene position: 1715062-1716162 (Clockwise)
Preceding gene: 238027174
Following gene: 238027176
Centisome position: 43.9
GC content: 64.49
Gene sequence:
>1101_bases ATGGACATGTCCGTACAGAAGCACCTGCGCCGTGCCGGGGCGTCGCTCGCGGCGCCCCCGATGTCGGCGGCCGTGGCGGA TGCCACGCGCCGGCTGATCCGCGCACGCACGCAGGACCAGCAGTACACCTACGACCGCGCCACGGTCGATTCGACCGGCG CGTTTCTGGTCGGCCAGCTCGAACGCCTCGACCAGACGCTGAACGAGCCGCTCGTCGAGTACACGTGGTCGCGTGACGTC TTCATCCGCACCGACGTATCGGCGGCCGATGAGGTGGCTTCGTTCACGAAGTCGGCATACGGCATGAACGGGGGCATCAA CCCGAACGGTCTGAATTGGATTTCCAACGAGGGCAACGCGATCGCCGGGCCGTCCGTCGATATCGGCAAGACGCCGCAGC CGATGCGCCTCTGGGGTGCCGAGGTCAAGTACACGGTGCCCGAACTGGTCAAGTCGCAGAAGCTCGGCATGCCGATCGAT GCGCAGAAGGTCGACGCCATGAACCTGAAGCGGAACATGGACATCGACCAGATCGTCTACTTCGGCGATCCGCAGATCGG CTTCACCGGCCTGGTCAACTCGAACAGCGCGGTCGCGAGCGTGACGAACGTCGCCAACGGCGCGAGCGGCACGCCGCAGT GGACCACGAAGACGCCCGACGAGATTCTGAGGGACGTCAACGAGATCCTGACTTCGGCATGGCAGGCGTCCGGCTGGAAG GTCAAGCCGAATCGCCTGATGCTCCCGCCGGCGCAACTCGGCTGGGTGGCGTCGCAGGTGATCAGCTCGGCGGGCAACAA GTCGATCCTGACGTACCTGCTCGAGAACAACATCTGCACGCAGCAGGGCGTGAAGCTGGAAATCCTGCCGCTGAAGTGGC TGATCGGCGCCGGTACCGGCGGCACGCCGGGCACGCTCGGCACGGTGGACCGGATGGTCGCGTACAACAACGACAAGAAG TACGTTCAGTACCCGATGACCGACCTGCAGCGCACGCCGCTCGAGTACCGCTCGCTGTTCCAGATAACTACATATTGGAG CCGACTCGGCCAAATCGAATGGCGCTACGGCACGACGGGCGCGTATCGGGACGGAATCTGA
Upstream 100 bases:
>100_bases TCGTCGAGATCGCCGTCAACATCTGATTTCCCGGCGCTGCACAGCGCTTCACCTCTGGCCCCGCTGACGCGGGGCCTTTG CATTTCTGGAGCCATTGAAC
Downstream 100 bases:
>100_bases CATGGAAAAGGTGAAGCTCCACATCCACACGCCGTTCACGCTGCGGCACGACGACGGCACGCTCGAGCAGTTCAGCGTGG GCGAGCGCGATATCCCGGTG
Product: putative bacteriophage protein
Products: NA
Alternate protein names: Exported Phage Protein
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MDMSVQKHLRRAGASLAAPPMSAAVADATRRLIRARTQDQQYTYDRATVDSTGAFLVGQLERLDQTLNEPLVEYTWSRDV FIRTDVSAADEVASFTKSAYGMNGGINPNGLNWISNEGNAIAGPSVDIGKTPQPMRLWGAEVKYTVPELVKSQKLGMPID AQKVDAMNLKRNMDIDQIVYFGDPQIGFTGLVNSNSAVASVTNVANGASGTPQWTTKTPDEILRDVNEILTSAWQASGWK VKPNRLMLPPAQLGWVASQVISSAGNKSILTYLLENNICTQQGVKLEILPLKWLIGAGTGGTPGTLGTVDRMVAYNNDKK YVQYPMTDLQRTPLEYRSLFQITTYWSRLGQIEWRYGTTGAYRDGI
Sequences:
>Translated_366_residues MDMSVQKHLRRAGASLAAPPMSAAVADATRRLIRARTQDQQYTYDRATVDSTGAFLVGQLERLDQTLNEPLVEYTWSRDV FIRTDVSAADEVASFTKSAYGMNGGINPNGLNWISNEGNAIAGPSVDIGKTPQPMRLWGAEVKYTVPELVKSQKLGMPID AQKVDAMNLKRNMDIDQIVYFGDPQIGFTGLVNSNSAVASVTNVANGASGTPQWTTKTPDEILRDVNEILTSAWQASGWK VKPNRLMLPPAQLGWVASQVISSAGNKSILTYLLENNICTQQGVKLEILPLKWLIGAGTGGTPGTLGTVDRMVAYNNDKK YVQYPMTDLQRTPLEYRSLFQITTYWSRLGQIEWRYGTTGAYRDGI >Mature_366_residues MDMSVQKHLRRAGASLAAPPMSAAVADATRRLIRARTQDQQYTYDRATVDSTGAFLVGQLERLDQTLNEPLVEYTWSRDV FIRTDVSAADEVASFTKSAYGMNGGINPNGLNWISNEGNAIAGPSVDIGKTPQPMRLWGAEVKYTVPELVKSQKLGMPID AQKVDAMNLKRNMDIDQIVYFGDPQIGFTGLVNSNSAVASVTNVANGASGTPQWTTKTPDEILRDVNEILTSAWQASGWK VKPNRLMLPPAQLGWVASQVISSAGNKSILTYLLENNICTQQGVKLEILPLKWLIGAGTGGTPGTLGTVDRMVAYNNDKK YVQYPMTDLQRTPLEYRSLFQITTYWSRLGQIEWRYGTTGAYRDGI
Specific function: Unknown
COG id: COG4834
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40247; Mature: 40247
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMSVQKHLRRAGASLAAPPMSAAVADATRRLIRARTQDQQYTYDRATVDSTGAFLVGQL CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHH ERLDQTLNEPLVEYTWSRDVFIRTDVSAADEVASFTKSAYGMNGGINPNGLNWISNEGNA HHHHHHHCCCHHEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCE IAGPSVDIGKTPQPMRLWGAEVKYTVPELVKSQKLGMPIDAQKVDAMNLKRNMDIDQIVY ECCCCCCCCCCCCCHHHCCCCCEECHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHEEE FGDPQIGFTGLVNSNSAVASVTNVANGASGTPQWTTKTPDEILRDVNEILTSAWQASGWK ECCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE VKPNRLMLPPAQLGWVASQVISSAGNKSILTYLLENNICTQQGVKLEILPLKWLIGAGTG ECCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCC GTPGTLGTVDRMVAYNNDKKYVQYPMTDLQRTPLEYRSLFQITTYWSRLGQIEWRYGTTG CCCCCHHHHHHHHEECCCCCEEECCHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCC AYRDGI CCCCCC >Mature Secondary Structure MDMSVQKHLRRAGASLAAPPMSAAVADATRRLIRARTQDQQYTYDRATVDSTGAFLVGQL CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHH ERLDQTLNEPLVEYTWSRDVFIRTDVSAADEVASFTKSAYGMNGGINPNGLNWISNEGNA HHHHHHHCCCHHEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCE IAGPSVDIGKTPQPMRLWGAEVKYTVPELVKSQKLGMPIDAQKVDAMNLKRNMDIDQIVY ECCCCCCCCCCCCCHHHCCCCCEECHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHEEE FGDPQIGFTGLVNSNSAVASVTNVANGASGTPQWTTKTPDEILRDVNEILTSAWQASGWK ECCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE VKPNRLMLPPAQLGWVASQVISSAGNKSILTYLLENNICTQQGVKLEILPLKWLIGAGTG ECCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCC GTPGTLGTVDRMVAYNNDKKYVQYPMTDLQRTPLEYRSLFQITTYWSRLGQIEWRYGTTG CCCCCHHHHHHHHEECCCCCEEECCHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCC AYRDGI CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA