| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238027174
Identifier: 238027174
GI number: 238027174
Start: 1714472
End: 1714987
Strand: Direct
Name: 238027174
Synonym: bglu_1g15600
Alternate gene names: NA
Gene position: 1714472-1714987 (Clockwise)
Preceding gene: 238027173
Following gene: 238027175
Centisome position: 43.89
GC content: 70.93
Gene sequence:
>516_bases ATGCCTTCCCCGTATGAAGCGTATCAATTCCGCATGCCGGCGGGTTTCCCCGGCGACCTGCAGCGCGCCGAGGTGGCGAC GATCGAGACGCAGCTGATCGACCCCGCGGCGCCCCCGACGGCGTTCGGCGTGGCCGTGAAGCTCGTCAACGGCAAGATCC AGCCGATCAACAACGCGGCCGACACCGCGGCGTCGGTCTACGGCGTGAACCTGCGCCCGTACCCGATCCAGGGCAACGGC ACCGATCCGCTCGGCACGTCGACGCCGCCGACCAGCGGCGCCACGGACGTGCTGAAGCGCGGCTACCTGATGGTCTCGCT CGGCGGCACGGCCGCCGCCACGAAGGGCGGCACTGTCTACGTGCGCGTCGCCGGCGCGGCGACCGGCAAGCCGCTCGGCG GCTTCGAGGCCGCGGCGGACTCGACCAGCGCCAACACGGTCGCGATGCCCGCCAGTTGGTACTTCACCGGTCCCGCCGAC GCCAACGGCGTCGTCGAGATCGCCGTCAACATCTGA
Upstream 100 bases:
>100_bases TCAGACCGGTGACGCCGCCGGCGGCGCGAGCGGTGCCGCGAAGAAGGATATCAACGCAGTCCACGCCCAATTCTGGGCGA ACCACAAGTAAGGAGCCGAC
Downstream 100 bases:
>100_bases TTTCCCGGCGCTGCACAGCGCTTCACCTCTGGCCCCGCTGACGCGGGGCCTTTGCATTTCTGGAGCCATTGAACATGGAC ATGTCCGTACAGAAGCACCT
Product: putative bacteriophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MPSPYEAYQFRMPAGFPGDLQRAEVATIETQLIDPAAPPTAFGVAVKLVNGKIQPINNAADTAASVYGVNLRPYPIQGNG TDPLGTSTPPTSGATDVLKRGYLMVSLGGTAAATKGGTVYVRVAGAATGKPLGGFEAAADSTSANTVAMPASWYFTGPAD ANGVVEIAVNI
Sequences:
>Translated_171_residues MPSPYEAYQFRMPAGFPGDLQRAEVATIETQLIDPAAPPTAFGVAVKLVNGKIQPINNAADTAASVYGVNLRPYPIQGNG TDPLGTSTPPTSGATDVLKRGYLMVSLGGTAAATKGGTVYVRVAGAATGKPLGGFEAAADSTSANTVAMPASWYFTGPAD ANGVVEIAVNI >Mature_170_residues PSPYEAYQFRMPAGFPGDLQRAEVATIETQLIDPAAPPTAFGVAVKLVNGKIQPINNAADTAASVYGVNLRPYPIQGNGT DPLGTSTPPTSGATDVLKRGYLMVSLGGTAAATKGGTVYVRVAGAATGKPLGGFEAAADSTSANTVAMPASWYFTGPADA NGVVEIAVNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17331; Mature: 17199
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPYEAYQFRMPAGFPGDLQRAEVATIETQLIDPAAPPTAFGVAVKLVNGKIQPINNAA CCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCHHEEEEEEECCEEEECCCCC DTAASVYGVNLRPYPIQGNGTDPLGTSTPPTSGATDVLKRGYLMVSLGGTAAATKGGTVY CCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCEEECCCCEEE VRVAGAATGKPLGGFEAAADSTSANTVAMPASWYFTGPADANGVVEIAVNI EEEECCCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCCEEEEEEEC >Mature Secondary Structure PSPYEAYQFRMPAGFPGDLQRAEVATIETQLIDPAAPPTAFGVAVKLVNGKIQPINNAA CCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCHHEEEEEEECCEEEECCCCC DTAASVYGVNLRPYPIQGNGTDPLGTSTPPTSGATDVLKRGYLMVSLGGTAAATKGGTVY CCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCEEECCCCEEE VRVAGAATGKPLGGFEAAADSTSANTVAMPASWYFTGPADANGVVEIAVNI EEEECCCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA