| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is phbA [H]
Identifier: 238027093
GI number: 238027093
Start: 1622908
End: 1624089
Strand: Direct
Name: phbA [H]
Synonym: bglu_1g14720
Alternate gene names: 238027093
Gene position: 1622908-1624089 (Clockwise)
Preceding gene: 238027092
Following gene: 238027094
Centisome position: 41.54
GC content: 69.63
Gene sequence:
>1182_bases ATGACTGAGGTAGTGATCGTATCGGCCGCGCGTACCGCGGTCGGCAAGTTCGGTGGGTCGCTGGCGAAGATCGCGGCGCC CGAACTCGGCGCGGCCGTGATCCGCGCGGTGCTGGAGCGCGGCGGCGTGGCGCCCGACCAGATCAGCGAAGTGATCCTCG GGCAGGTGCTGGCGGCCGGCTCCGGCCAGAACCCGGCGCGTCAGTCGGTGATCAAGGCCGGCCTGCCCACGGCCGTGCCG GCGATGACCATCAACAAGGTCTGCGGCTCGGGCCTGAAGGCCGTGATGCTGGCGGCCAACGCGATCATCGCCGGCGATGC CGAGATCGTGATCGCGGGCGGCCAGGAAAACATGAGCGCGGCGCCGCACGTGCTGCCGGGCTCGCGCGACGGCTTCCGGA TGGGCGACGCGAAGCTGGTCGACACGATGATCGTGGACGGCCTGTGGGACGTCTACAACCAGTACCACATGGGCATCACG GCCGAGAACGTCGCGAAGGAATATGGCATCACGCGCGAGGCGCAGGACGCGTTCGCCGCGCAGTCGCAGAACAAGGCCGA GGCCGCCCAGAAGTCGGGCCGTTTCGACGACGAGATCGTGCCGATCGAGATCCCGCAGCGCAAGGGCGAGCCGCTGCGCT TCGCCACCGACGAGTTCGTGCGCCACGGCGTGACGGCCGAGTCGCTGGCGGGCCTCAAGCCCGCCTTCACGAAGGAGGGC ACGGTGACGGCCGCCAACGCCTCGGGCATCAACGACGGCGCGGCCGCGGTGCTGGTGATGTCGGCGCAGAAGGCCAAAGC GCTCGGCCTCACGCCGCTCGCGCGTATCAAGGCCTACGCGAGCGCCGGCGTCGATCCGAAGGTGATGGGCATGGGCCCGG TGCCGGCCTCGCGCCGCTGCCTGGAACGCGCGGGCTGGTCGGTCGACGATCTCGACCTGATGGAGATCAACGAGGCATTC GCGGCACAGGCGCTGGCCGTGCATCAGCAGATGGGCTGGGACACCTCGAAGGTGAACGTCAACGGTGGCGCGATCGCGAT CGGCCATCCGATCGGCGCGTCCGGCTGCCGGATTCTCGTCACGCTGCTGCACGAGATGCAAAAGCGTGACGCGAAGCGCG GTCTCGCCTCGCTCTGTATCGGCGGCGGGATGGGGGTCGCGCTGGCGGTCGAGCGCCCCTGA
Upstream 100 bases:
>100_bases GGGACATTGACGGATGGCGGCGGGCGGCGCACGCTCGCCGACTGCTTCCGGGGATTTTTCAACTGAGCGGGTCGCGCTTG CCGGCCTGGAGGACAAGGAC
Downstream 100 bases:
>100_bases CGTGCTGCCCGGCGCGGTGGGCGGCACCGGGCAACGAGGCGAAAGAGACAGACGCAAGCGCCGTCCGGCGCTTCGACAAC GATAAATGGAGTGTTCTGTA
Product: putative acyltransferase
Products: NA
Alternate protein names: Acetoacetyl-CoA thiolase [H]
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MTEVVIVSAARTAVGKFGGSLAKIAAPELGAAVIRAVLERGGVAPDQISEVILGQVLAAGSGQNPARQSVIKAGLPTAVP AMTINKVCGSGLKAVMLAANAIIAGDAEIVIAGGQENMSAAPHVLPGSRDGFRMGDAKLVDTMIVDGLWDVYNQYHMGIT AENVAKEYGITREAQDAFAAQSQNKAEAAQKSGRFDDEIVPIEIPQRKGEPLRFATDEFVRHGVTAESLAGLKPAFTKEG TVTAANASGINDGAAAVLVMSAQKAKALGLTPLARIKAYASAGVDPKVMGMGPVPASRRCLERAGWSVDDLDLMEINEAF AAQALAVHQQMGWDTSKVNVNGGAIAIGHPIGASGCRILVTLLHEMQKRDAKRGLASLCIGGGMGVALAVERP
Sequences:
>Translated_393_residues MTEVVIVSAARTAVGKFGGSLAKIAAPELGAAVIRAVLERGGVAPDQISEVILGQVLAAGSGQNPARQSVIKAGLPTAVP AMTINKVCGSGLKAVMLAANAIIAGDAEIVIAGGQENMSAAPHVLPGSRDGFRMGDAKLVDTMIVDGLWDVYNQYHMGIT AENVAKEYGITREAQDAFAAQSQNKAEAAQKSGRFDDEIVPIEIPQRKGEPLRFATDEFVRHGVTAESLAGLKPAFTKEG TVTAANASGINDGAAAVLVMSAQKAKALGLTPLARIKAYASAGVDPKVMGMGPVPASRRCLERAGWSVDDLDLMEINEAF AAQALAVHQQMGWDTSKVNVNGGAIAIGHPIGASGCRILVTLLHEMQKRDAKRGLASLCIGGGMGVALAVERP >Mature_392_residues TEVVIVSAARTAVGKFGGSLAKIAAPELGAAVIRAVLERGGVAPDQISEVILGQVLAAGSGQNPARQSVIKAGLPTAVPA MTINKVCGSGLKAVMLAANAIIAGDAEIVIAGGQENMSAAPHVLPGSRDGFRMGDAKLVDTMIVDGLWDVYNQYHMGITA ENVAKEYGITREAQDAFAAQSQNKAEAAQKSGRFDDEIVPIEIPQRKGEPLRFATDEFVRHGVTAESLAGLKPAFTKEGT VTAANASGINDGAAAVLVMSAQKAKALGLTPLARIKAYASAGVDPKVMGMGPVPASRRCLERAGWSVDDLDLMEINEAFA AQALAVHQQMGWDTSKVNVNGGAIAIGHPIGASGCRILVTLLHEMQKRDAKRGLASLCIGGGMGVALAVERP
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiolase family [H]
Homologues:
Organism=Homo sapiens, GI148539872, Length=391, Percent_Identity=55.2429667519182, Blast_Score=439, Evalue=1e-123, Organism=Homo sapiens, GI167614485, Length=390, Percent_Identity=44.6153846153846, Blast_Score=328, Evalue=4e-90, Organism=Homo sapiens, GI4557237, Length=393, Percent_Identity=43.5114503816794, Blast_Score=322, Evalue=5e-88, Organism=Homo sapiens, GI4501853, Length=397, Percent_Identity=41.5617128463476, Blast_Score=269, Evalue=3e-72, Organism=Homo sapiens, GI4504327, Length=424, Percent_Identity=30.6603773584906, Blast_Score=188, Evalue=8e-48, Organism=Homo sapiens, GI194353979, Length=394, Percent_Identity=31.4720812182741, Blast_Score=161, Evalue=9e-40, Organism=Escherichia coli, GI87082165, Length=392, Percent_Identity=62.2448979591837, Blast_Score=491, Evalue=1e-140, Organism=Escherichia coli, GI1788554, Length=393, Percent_Identity=59.7964376590331, Blast_Score=446, Evalue=1e-126, Organism=Escherichia coli, GI1787663, Length=404, Percent_Identity=46.2871287128713, Blast_Score=325, Evalue=3e-90, Organism=Escherichia coli, GI48994986, Length=401, Percent_Identity=42.643391521197, Blast_Score=276, Evalue=2e-75, Organism=Escherichia coli, GI1788683, Length=410, Percent_Identity=34.8780487804878, Blast_Score=206, Evalue=2e-54, Organism=Caenorhabditis elegans, GI133906874, Length=390, Percent_Identity=46.4102564102564, Blast_Score=336, Evalue=1e-92, Organism=Caenorhabditis elegans, GI25147385, Length=387, Percent_Identity=42.3772609819121, Blast_Score=301, Evalue=4e-82, Organism=Caenorhabditis elegans, GI17535921, Length=392, Percent_Identity=41.3265306122449, Blast_Score=281, Evalue=3e-76, Organism=Caenorhabditis elegans, GI17551802, Length=428, Percent_Identity=31.5420560747664, Blast_Score=187, Evalue=7e-48, Organism=Caenorhabditis elegans, GI17535917, Length=394, Percent_Identity=32.994923857868, Blast_Score=187, Evalue=9e-48, Organism=Saccharomyces cerevisiae, GI6325229, Length=393, Percent_Identity=43.2569974554707, Blast_Score=298, Evalue=1e-81, Organism=Saccharomyces cerevisiae, GI6322031, Length=399, Percent_Identity=39.8496240601504, Blast_Score=239, Evalue=7e-64, Organism=Drosophila melanogaster, GI24655093, Length=392, Percent_Identity=57.3979591836735, Blast_Score=453, Evalue=1e-128, Organism=Drosophila melanogaster, GI24640423, Length=393, Percent_Identity=45.5470737913486, Blast_Score=329, Evalue=2e-90, Organism=Drosophila melanogaster, GI17648125, Length=390, Percent_Identity=44.8717948717949, Blast_Score=316, Evalue=1e-86, Organism=Drosophila melanogaster, GI17137578, Length=425, Percent_Identity=30.8235294117647, Blast_Score=181, Evalue=1e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020615 - InterPro: IPR020610 - InterPro: IPR020617 - InterPro: IPR020613 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: =2.3.1.9 [H]
Molecular weight: Translated: 40575; Mature: 40444
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: PS00098 THIOLASE_1 ; PS00737 THIOLASE_2 ; PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEVVIVSAARTAVGKFGGSLAKIAAPELGAAVIRAVLERGGVAPDQISEVILGQVLAAG CCEEEEEEHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC SGQNPARQSVIKAGLPTAVPAMTINKVCGSGLKAVMLAANAIIAGDAEIVIAGGQENMSA CCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCEEEECCCEEEEECCCCCCCC APHVLPGSRDGFRMGDAKLVDTMIVDGLWDVYNQYHMGITAENVAKEYGITREAQDAFAA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH QSQNKAEAAQKSGRFDDEIVPIEIPQRKGEPLRFATDEFVRHGVTAESLAGLKPAFTKEG HCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEHHHHHHHCCCCHHHHCCCCCCCCCCC TVTAANASGINDGAAAVLVMSAQKAKALGLTPLARIKAYASAGVDPKVMGMGPVPASRRC CEEECCCCCCCCCCEEEEEEEHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHH LERAGWSVDDLDLMEINEAFAAQALAVHQQMGWDTSKVNVNGGAIAIGHPIGASGCRILV HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCCCHHHHHH TLLHEMQKRDAKRGLASLCIGGGMGVALAVERP HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC >Mature Secondary Structure TEVVIVSAARTAVGKFGGSLAKIAAPELGAAVIRAVLERGGVAPDQISEVILGQVLAAG CEEEEEEHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC SGQNPARQSVIKAGLPTAVPAMTINKVCGSGLKAVMLAANAIIAGDAEIVIAGGQENMSA CCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCEEEECCCEEEEECCCCCCCC APHVLPGSRDGFRMGDAKLVDTMIVDGLWDVYNQYHMGITAENVAKEYGITREAQDAFAA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH QSQNKAEAAQKSGRFDDEIVPIEIPQRKGEPLRFATDEFVRHGVTAESLAGLKPAFTKEG HCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEHHHHHHHCCCCHHHHCCCCCCCCCCC TVTAANASGINDGAAAVLVMSAQKAKALGLTPLARIKAYASAGVDPKVMGMGPVPASRRC CEEECCCCCCCCCCEEEEEEEHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHH LERAGWSVDDLDLMEINEAFAAQALAVHQQMGWDTSKVNVNGGAIAIGHPIGASGCRILV HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCCCHHHHHH TLLHEMQKRDAKRGLASLCIGGGMGVALAVERP HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2670935; 2670936 [H]