BacMap

Definition	Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession	NC_012724
Length	3,906,507

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The map label for this gene is phbB [H]

Identifier: 238027094

GI number: 238027094

Start: 1624189

End: 1624929

Strand: Direct

Name: phbB [H]

Synonym: bglu_1g14730

Alternate gene names: 238027094

Gene position: 1624189-1624929 (Clockwise)

Preceding gene: 238027093

Following gene: 238027095

Centisome position: 41.58

GC content: 65.05

Gene sequence:

>741_bases
ATGACTCAGCGAATTGCTTACGTAACCGGCGGCATGGGCGGCATCGGCACGGGCATCTGCCAGCGCCTGCACAAGGCCGG
CTTCCAGGTGGTGGCCGGCTGCGGGCCGAACTCGCCGCGCCGGGTGAAGTGGCTCGAGGATCAGAAGGCGCTGGGTTTCG
ATTTCTACGCTTCCGAGGGCAACGTCGGCGACTGGGAGTCGACCAAGCTGGCCTTCGACAAGGTCAAGGCCGAGGTGGGC
GAGGTCGACGTGCTCGTCAACAACGCGGGCATCACGCGCGACGTGGTGTTCCGCAAGATGACGCTGGAGGACTGGCAGGC
CGTCATCGACACCAACCTGACCAGCCTCTTCAACGTGACCAAGCAGGTGATCGACGGCATGGTCGAGCGGGGCTGGGGCC
GCATCATCAATATTTCGTCGGTGAACGGCCAGAAGGGGCAGTTCGGCCAGACCAACTACTCGACCGCCAAGGCCGGCATC
CATGGCTTCACGATGTCGCTGGCGCAGGAAGTGGCCACCAAGGGCGTGACGGTCAACACCGTCTCGCCGGGCTATATCGG
CACCGACATGGTCAAGGCGATCCGCCCCGACGTGCTCGAGAAGATCGTCGCGACGATCCCGGTGCGCCGCCTCGGCTCCC
CCGACGAGATCGCCTCGATCGTGTCGTGGCTCGCCTCGGATGAATCCGGCTTCGCCACCGGTGCCGACTTCTCGCTGAAC
GGCGGCCTGCACATGGGCTAG

Upstream 100 bases:

>100_bases
ACGTGCTGCCCGGCGCGGTGGGCGGCACCGGGCAACGAGGCGAAAGAGACAGACGCAAGCGCCGTCCGGCGCTTCGACAA
CGATAAATGGAGTGTTCTGT

Downstream 100 bases:

>100_bases
GGGGCCGGGCCCGCGCGCGGCCGGCCGGGGGGGGCCGCATCGCGCCGCAGCGGCGCCCACAAGGTGTTATATGACTACTA
CAAAGAAGACTGCCGAACGA

Product: acetyacetyl-CoA reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MTQRIAYVTGGMGGIGTGICQRLHKAGFQVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWESTKLAFDKVKAEVG
EVDVLVNNAGITRDVVFRKMTLEDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGI
HGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIASIVSWLASDESGFATGADFSLN
GGLHMG

Sequences:

>Translated_246_residues
MTQRIAYVTGGMGGIGTGICQRLHKAGFQVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWESTKLAFDKVKAEVG
EVDVLVNNAGITRDVVFRKMTLEDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGI
HGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIASIVSWLASDESGFATGADFSLN
GGLHMG
>Mature_245_residues
TQRIAYVTGGMGGIGTGICQRLHKAGFQVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWESTKLAFDKVKAEVGE
VDVLVNNAGITRDVVFRKMTLEDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIH
GFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIASIVSWLASDESGFATGADFSLNG
GLHMG

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=253, Percent_Identity=35.5731225296443, Blast_Score=143, Evalue=1e-34,
Organism=Homo sapiens, GI40254992, Length=246, Percent_Identity=33.3333333333333, Blast_Score=129, Evalue=2e-30,
Organism=Homo sapiens, GI4758504, Length=254, Percent_Identity=33.4645669291339, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI4504505, Length=249, Percent_Identity=32.5301204819277, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI32483357, Length=248, Percent_Identity=30.241935483871, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI7705925, Length=246, Percent_Identity=29.6747967479675, Blast_Score=98, Evalue=7e-21,
Organism=Homo sapiens, GI83715985, Length=254, Percent_Identity=31.8897637795276, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI19923817, Length=250, Percent_Identity=28.8, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI10190704, Length=247, Percent_Identity=27.5303643724696, Blast_Score=88, Evalue=8e-18,
Organism=Homo sapiens, GI126723750, Length=256, Percent_Identity=28.515625, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI66933014, Length=187, Percent_Identity=30.4812834224599, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI40548397, Length=207, Percent_Identity=30.9178743961353, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI214010158, Length=207, Percent_Identity=30.9178743961353, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI214010156, Length=207, Percent_Identity=30.9178743961353, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI22758144, Length=207, Percent_Identity=30.9178743961353, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI5031737, Length=246, Percent_Identity=28.4552845528455, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI109715829, Length=239, Percent_Identity=25.9414225941423, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI7706318, Length=201, Percent_Identity=28.3582089552239, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI7705855, Length=209, Percent_Identity=31.1004784688995, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI59889578, Length=175, Percent_Identity=31.4285714285714, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI31542939, Length=206, Percent_Identity=29.6116504854369, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI7657478, Length=189, Percent_Identity=30.6878306878307, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI150247226, Length=191, Percent_Identity=29.8429319371728, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI33667109, Length=198, Percent_Identity=30.8080808080808, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI22507405, Length=187, Percent_Identity=29.9465240641711, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI20149619, Length=200, Percent_Identity=27.5, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI19743808, Length=193, Percent_Identity=29.0155440414508, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI44680136, Length=186, Percent_Identity=28.494623655914, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI44680133, Length=186, Percent_Identity=28.494623655914, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI17738292, Length=186, Percent_Identity=28.494623655914, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI4503817, Length=184, Percent_Identity=29.3478260869565, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1787335, Length=242, Percent_Identity=44.6280991735537, Blast_Score=198, Evalue=2e-52,
Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=36.2549800796813, Blast_Score=144, Evalue=6e-36,
Organism=Escherichia coli, GI1789208, Length=242, Percent_Identity=30.1652892561983, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1790717, Length=240, Percent_Identity=31.6666666666667, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1788459, Length=254, Percent_Identity=28.740157480315, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI2367175, Length=248, Percent_Identity=29.8387096774194, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI87082160, Length=241, Percent_Identity=29.045643153527, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1787820, Length=185, Percent_Identity=33.5135135135135, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1787905, Length=240, Percent_Identity=28.3333333333333, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1786812, Length=204, Percent_Identity=28.4313725490196, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI2367365, Length=167, Percent_Identity=32.9341317365269, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1789378, Length=252, Percent_Identity=26.984126984127, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789057, Length=258, Percent_Identity=26.3565891472868, Blast_Score=78, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI25147288, Length=244, Percent_Identity=41.3934426229508, Blast_Score=165, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17555706, Length=246, Percent_Identity=38.2113821138211, Blast_Score=163, Evalue=8e-41,
Organism=Caenorhabditis elegans, GI17560676, Length=247, Percent_Identity=30.3643724696356, Blast_Score=117, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI17538182, Length=254, Percent_Identity=32.6771653543307, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17568967, Length=248, Percent_Identity=31.4516129032258, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71994600, Length=247, Percent_Identity=29.5546558704453, Blast_Score=97, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI115534694, Length=245, Percent_Identity=28.5714285714286, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17561402, Length=250, Percent_Identity=28.8, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=27.6, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI193203115, Length=189, Percent_Identity=32.2751322751323, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI193203117, Length=189, Percent_Identity=32.2751322751323, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17536651, Length=252, Percent_Identity=29.7619047619048, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17561272, Length=196, Percent_Identity=28.0612244897959, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17508651, Length=250, Percent_Identity=28, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17536025, Length=251, Percent_Identity=28.2868525896414, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=27.2388059701493, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17562910, Length=264, Percent_Identity=28.4090909090909, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=26.7175572519084, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17560150, Length=179, Percent_Identity=30.1675977653631, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17562990, Length=185, Percent_Identity=31.3513513513514, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=246, Percent_Identity=24.7967479674797, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193204405, Length=264, Percent_Identity=28.030303030303, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=28.6259541984733, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=168, Percent_Identity=31.547619047619, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI32563809, Length=226, Percent_Identity=23.8938053097345, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17507613, Length=226, Percent_Identity=23.8938053097345, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17551412, Length=273, Percent_Identity=25.6410256410256, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17562908, Length=262, Percent_Identity=28.2442748091603, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17563726, Length=184, Percent_Identity=25, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17538480, Length=265, Percent_Identity=24.5283018867925, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI72000259, Length=262, Percent_Identity=26.7175572519084, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=248, Percent_Identity=31.8548387096774, Blast_Score=102, Evalue=5e-23,
Organism=Saccharomyces cerevisiae, GI6324126, Length=255, Percent_Identity=27.0588235294118, Blast_Score=77, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322795, Length=264, Percent_Identity=26.1363636363636, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6323882, Length=201, Percent_Identity=26.3681592039801, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24639444, Length=246, Percent_Identity=33.739837398374, Blast_Score=133, Evalue=1e-31,
Organism=Drosophila melanogaster, GI23397609, Length=253, Percent_Identity=32.0158102766798, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=30.952380952381, Blast_Score=110, Evalue=9e-25,
Organism=Drosophila melanogaster, GI21357041, Length=254, Percent_Identity=34.251968503937, Blast_Score=107, Evalue=7e-24,
Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=31.6, Blast_Score=104, Evalue=6e-23,
Organism=Drosophila melanogaster, GI17737361, Length=257, Percent_Identity=31.1284046692607, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21355319, Length=248, Percent_Identity=28.2258064516129, Blast_Score=100, Evalue=9e-22,
Organism=Drosophila melanogaster, GI24643142, Length=244, Percent_Identity=28.6885245901639, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI18859837, Length=232, Percent_Identity=31.4655172413793, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24644337, Length=169, Percent_Identity=34.3195266272189, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI21358495, Length=195, Percent_Identity=29.2307692307692, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI116007236, Length=203, Percent_Identity=30.5418719211823, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24641232, Length=216, Percent_Identity=29.6296296296296, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24581726, Length=177, Percent_Identity=27.683615819209, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI78706930, Length=215, Percent_Identity=30.6976744186047, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI78706928, Length=215, Percent_Identity=30.6976744186047, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI78706926, Length=215, Percent_Identity=30.6976744186047, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI78706924, Length=215, Percent_Identity=30.6976744186047, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI78706922, Length=215, Percent_Identity=30.6976744186047, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24648693, Length=204, Percent_Identity=30.8823529411765, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI21355889, Length=204, Percent_Identity=30.8823529411765, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI21355631, Length=174, Percent_Identity=27.5862068965517, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24656154, Length=267, Percent_Identity=27.7153558052434, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI19922628, Length=267, Percent_Identity=27.7153558052434, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011283
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.36 [H]

Molecular weight: Translated: 26362; Mature: 26231

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQRIAYVTGGMGGIGTGICQRLHKAGFQVVAGCGPNSPRRVKWLEDQKALGFDFYASEG
CCCEEEEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCCEEEECCCC
NVGDWESTKLAFDKVKAEVGEVDVLVNNAGITRDVVFRKMTLEDWQAVIDTNLTSLFNVT
CCCCCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNT
HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEC
VSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIASIVSWLASDESGFATGADFSLN
CCCCCCCHHHHHHHCHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEC
GGLHMG
CCCCCC
>Mature Secondary Structure 
TQRIAYVTGGMGGIGTGICQRLHKAGFQVVAGCGPNSPRRVKWLEDQKALGFDFYASEG
CCEEEEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCCEEEECCCC
NVGDWESTKLAFDKVKAEVGEVDVLVNNAGITRDVVFRKMTLEDWQAVIDTNLTSLFNVT
CCCCCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNT
HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEC
VSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIASIVSWLASDESGFATGADFSLN
CCCCCCCHHHHHHHCHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEC
GGLHMG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2670935 [H]