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The map label for this gene is yfdE [H]

Identifier: 238027059

GI number: 238027059

Start: 1583402

End: 1584607

Strand: Direct

Name: yfdE [H]

Synonym: bglu_1g14380

Alternate gene names: 238027059

Gene position: 1583402-1584607 (Clockwise)

Preceding gene: 238027058

Following gene: 238027060

Centisome position: 40.53

GC content: 69.73

Gene sequence:

>1206_bases
ATGAGCGCAAAACCGGGCCCGCTCGCGGGCGTCAAGGTGCTCGAATTCGGCACGCTGATCGCGGGGCCGTTCGCGGCGCG
CCTGTTCGCCGAGTTCGGTGCCGAAGTGATCAAGATCGAGGACCCGAACGGCGGCGACCCGCTGCGCAAGTGGCGCAAGC
TCTACCCGGAGGCGGGCGGCACGTCGCTCTGGTGGTCGGTGCAGGCGCGCAACAAGAAGTCGGTCACGCTGAACCTGAAG
ACCGACGAGGGCCGGCGCATCGCGCAGCAGCTCGCCGCCGAGGCCGACATCGTGATCGAGAATTTCCGGCCCGGCCTGCT
CGAAAAGCTCGGCCTCGGCTACGACGTGTTGTCGGCCGGCAATCCCGGCCTCGTCATGGTGCGGCTGTCCGGCTATGGTC
AGAGCGGCCCGTACCGCGACCGGCCCGGTTTCGGTGCGATCGCCGAAGCGATGGGCGGGCTGCGCCACATCACCGGCTAC
CCCGAGCTGCCGCCGCCGCGCATCGGCATCTCGATCGGCGATTCGATCGCGGCGCTGCATGGCGTGATCGGCGCGATGAT
GGCGCTGCACCACCGCAACGTGAACGGCGGCAAGGGGCAGGTGGTCGACGTCGCGCTCTACGAGGCCGTGTTCAACATGA
TGGAAAGCGTGGTGCCCGAGTACGGCGTATACGGCATGGTGCGCGAGCGCACCGGCGCGTCGCTGCCCGGCATCGTGCCG
TCGAACACCTATGCATGCGCGGACGGCAGCATCGTGATCGGCGGCAACAGCGACCCGATCTTCAAGCGTCTGATGCAGGC
GATCGAGCGTCCCGACCTGGCCGACGACCCCGCGCTCGCGCACAACGACGGCCGCGTGCCGCGCACCGCCGAGATCGATG
CGGCGATCGCCGCTTGGCTCGCGCCGCGCACCATCGAGGCCGCGCTCGCGGTGCTGAACGCGGCCGACGTGCCTGCCGGG
CGCATCTACAGCGTCGCCGACATGTTCACCGATCCGCAGTTCGTCGCGCGCCAGATGATCGGGCAGTTCCGGCTGCCCGA
CGGGCAGCAGATCGCGCTGCCCGCGGTCACGCCGAAGCTGTTGGACACGCCGGGCCAGACGCGCTGGCTTGGTCCCGAAC
TCGGCGAGCACACCGACGAGGTGCTGGGTGCGCTCGGCTACGACTCGCGGGCGATCGCGGCGCTGCGGGACAGGCGCGTG
ATCTGA

Upstream 100 bases:

>100_bases
TACGTCGACGCGGGCACCATCGCGCGCGCGATGCTCGACCGCCGCACGATGTGATCGCAACACGGCCGCGTTCGCGCGCC
GCTCCGGAGAGACCCAGCAG

Downstream 100 bases:

>100_bases
GCGCGGCGGCGGCACCGGAGGCGCCCGGACTGTCGTTCGCGCGCCATCTTTCCTCGGTTACAATCGCCGAATGCGAATCC
TACTCAGCAACGACGACGGT

Product: CAIB/BAIF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MSAKPGPLAGVKVLEFGTLIAGPFAARLFAEFGAEVIKIEDPNGGDPLRKWRKLYPEAGGTSLWWSVQARNKKSVTLNLK
TDEGRRIAQQLAAEADIVIENFRPGLLEKLGLGYDVLSAGNPGLVMVRLSGYGQSGPYRDRPGFGAIAEAMGGLRHITGY
PELPPPRIGISIGDSIAALHGVIGAMMALHHRNVNGGKGQVVDVALYEAVFNMMESVVPEYGVYGMVRERTGASLPGIVP
SNTYACADGSIVIGGNSDPIFKRLMQAIERPDLADDPALAHNDGRVPRTAEIDAAIAAWLAPRTIEAALAVLNAADVPAG
RIYSVADMFTDPQFVARQMIGQFRLPDGQQIALPAVTPKLLDTPGQTRWLGPELGEHTDEVLGALGYDSRAIAALRDRRV
I

Sequences:

>Translated_401_residues
MSAKPGPLAGVKVLEFGTLIAGPFAARLFAEFGAEVIKIEDPNGGDPLRKWRKLYPEAGGTSLWWSVQARNKKSVTLNLK
TDEGRRIAQQLAAEADIVIENFRPGLLEKLGLGYDVLSAGNPGLVMVRLSGYGQSGPYRDRPGFGAIAEAMGGLRHITGY
PELPPPRIGISIGDSIAALHGVIGAMMALHHRNVNGGKGQVVDVALYEAVFNMMESVVPEYGVYGMVRERTGASLPGIVP
SNTYACADGSIVIGGNSDPIFKRLMQAIERPDLADDPALAHNDGRVPRTAEIDAAIAAWLAPRTIEAALAVLNAADVPAG
RIYSVADMFTDPQFVARQMIGQFRLPDGQQIALPAVTPKLLDTPGQTRWLGPELGEHTDEVLGALGYDSRAIAALRDRRV
I
>Mature_400_residues
SAKPGPLAGVKVLEFGTLIAGPFAARLFAEFGAEVIKIEDPNGGDPLRKWRKLYPEAGGTSLWWSVQARNKKSVTLNLKT
DEGRRIAQQLAAEADIVIENFRPGLLEKLGLGYDVLSAGNPGLVMVRLSGYGQSGPYRDRPGFGAIAEAMGGLRHITGYP
ELPPPRIGISIGDSIAALHGVIGAMMALHHRNVNGGKGQVVDVALYEAVFNMMESVVPEYGVYGMVRERTGASLPGIVPS
NTYACADGSIVIGGNSDPIFKRLMQAIERPDLADDPALAHNDGRVPRTAEIDAAIAAWLAPRTIEAALAVLNAADVPAGR
IYSVADMFTDPQFVARQMIGQFRLPDGQQIALPAVTPKLLDTPGQTRWLGPELGEHTDEVLGALGYDSRAIAALRDRRVI

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=396, Percent_Identity=31.3131313131313, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI300863124, Length=422, Percent_Identity=29.8578199052133, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI300863126, Length=390, Percent_Identity=30, Blast_Score=172, Evalue=6e-43,
Organism=Homo sapiens, GI13376042, Length=422, Percent_Identity=26.5402843601896, Blast_Score=143, Evalue=2e-34,
Organism=Homo sapiens, GI42794625, Length=397, Percent_Identity=27.7078085642317, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI266456254, Length=397, Percent_Identity=27.7078085642317, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI266458393, Length=260, Percent_Identity=30.7692307692308, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI266458397, Length=260, Percent_Identity=30.7692307692308, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI266458395, Length=131, Percent_Identity=35.8778625954198, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI42822893, Length=131, Percent_Identity=35.8778625954198, Blast_Score=85, Evalue=1e-16,
Organism=Escherichia coli, GI87082093, Length=335, Percent_Identity=34.3283582089552, Blast_Score=205, Evalue=5e-54,
Organism=Escherichia coli, GI1788717, Length=425, Percent_Identity=29.1764705882353, Blast_Score=167, Evalue=9e-43,
Organism=Escherichia coli, GI1786222, Length=405, Percent_Identity=31.358024691358, Blast_Score=162, Evalue=4e-41,
Organism=Caenorhabditis elegans, GI115535051, Length=261, Percent_Identity=29.5019157088123, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI32564160, Length=260, Percent_Identity=28.4615384615385, Blast_Score=88, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24648431, Length=396, Percent_Identity=31.5656565656566, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24585488, Length=271, Percent_Identity=32.1033210332103, Blast_Score=111, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 42830; Mature: 42699

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKPGPLAGVKVLEFGTLIAGPFAARLFAEFGAEVIKIEDPNGGDPLRKWRKLYPEAGG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCC
TSLWWSVQARNKKSVTLNLKTDEGRRIAQQLAAEADIVIENFRPGLLEKLGLGYDVLSAG
CEEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHEEEECCCCHHHHHHCCCEEEECCC
NPGLVMVRLSGYGQSGPYRDRPGFGAIAEAMGGLRHITGYPELPPPRIGISIGDSIAALH
CCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCHHCCCCCCCCCCCCEEEECCHHHHHHH
GVIGAMMALHHRNVNGGKGQVVDVALYEAVFNMMESVVPEYGVYGMVRERTGASLPGIVP
HHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCC
SNTYACADGSIVIGGNSDPIFKRLMQAIERPDLADDPALAHNDGRVPRTAEIDAAIAAWL
CCCEEECCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
APRTIEAALAVLNAADVPAGRIYSVADMFTDPQFVARQMIGQFRLPDGQQIALPAVTPKL
CHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEECCCCHHH
LDTPGQTRWLGPELGEHTDEVLGALGYDSRAIAALRDRRVI
HCCCCCCEECCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
SAKPGPLAGVKVLEFGTLIAGPFAARLFAEFGAEVIKIEDPNGGDPLRKWRKLYPEAGG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCC
TSLWWSVQARNKKSVTLNLKTDEGRRIAQQLAAEADIVIENFRPGLLEKLGLGYDVLSAG
CEEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHEEEECCCCHHHHHHCCCEEEECCC
NPGLVMVRLSGYGQSGPYRDRPGFGAIAEAMGGLRHITGYPELPPPRIGISIGDSIAALH
CCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCHHCCCCCCCCCCCCEEEECCHHHHHHH
GVIGAMMALHHRNVNGGKGQVVDVALYEAVFNMMESVVPEYGVYGMVRERTGASLPGIVP
HHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCC
SNTYACADGSIVIGGNSDPIFKRLMQAIERPDLADDPALAHNDGRVPRTAEIDAAIAAWL
CCCEEECCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
APRTIEAALAVLNAADVPAGRIYSVADMFTDPQFVARQMIGQFRLPDGQQIALPAVTPKL
CHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEECCCCHHH
LDTPGQTRWLGPELGEHTDEVLGALGYDSRAIAALRDRRVI
HCCCCCCEECCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]