| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is surE [H]
Identifier: 238027060
GI number: 238027060
Start: 1584678
End: 1585439
Strand: Direct
Name: surE [H]
Synonym: bglu_1g14390
Alternate gene names: 238027060
Gene position: 1584678-1585439 (Clockwise)
Preceding gene: 238027059
Following gene: 339905964
Centisome position: 40.57
GC content: 67.45
Gene sequence:
>762_bases ATGCGAATCCTACTCAGCAACGACGACGGTTATCTGGCGCCCGGCCTCGCCGCGCTCTACGAGGCGCTGCGGCCGTTTGC CGACGTGACCGTGATGGCGCCCGAGCAGAACTGCAGCGGGGCATCCAATTCCCTGACGCTCTCGCGGCCGCTGTCGCTGC ACCGCTCGGCAGCGAGCGGCTTCCACTACGTGAACGGCACGCCGACCGATTCGGTCCACCTGGCGCTGACGGGCATGCTC GACGAGCGGCCCGACCTCGTCGTGTCGGGAATCAACAACGGCCAGAACATGGGCGACGACACGCTCTATTCCGGCACCGT CGCCGCCGCCACCGAAGGCATCATGTTCGGCATCCCGGCAATCGCGTTTTCGCTCGTCGACAAGGACTGGGTGGAACTCG AGTCGGCCGCCCGCGTGGCCGCCGACATCGTCCGGCATTTCATCGCGCAGCCGATGCCGGGCCAGCCGTTCCTGAACGTC AACATTCCGAACCTGCCCTACGCCGCGATCAAGGGCTGGCAGGTCACGCGGCTCGGCAAGCGCCATCCGTCGCAACCGGT GATCCGCCAGACCAATCCGCGCGGCGAGCCGATCTACTGGATCGGCGCGGCGGGCGCCGCGCTCGACGCGAGCGACGGCA CCGATTTCCATGCCACGGCGAACGGCTACGTGTCGATCACGCCCTTGCAGCTCGATCTCACCGATACGCAGAAACTGGCG GCGACGCGCGACTGGGCGCGTGCGCGGAGCGACGCTTCATGA
Upstream 100 bases:
>100_bases GCGGCGCTGCGGGACAGGCGCGTGATCTGAGCGCGGCGGCGGCACCGGAGGCGCCCGGACTGTCGTTCGCGCGCCATCTT TCCTCGGTTACAATCGCCGA
Downstream 100 bases:
>100_bases GCGGCGAGCGCGCCAAGCGGTTCCCGCTTGCGCTCGAGGATCTCAAACGCGCGCCGCGCAAGGCCGCCGCCCGCACCACC GAGCGCCATCCGACTTCGCC
Product: 5'(3')-nucleotidase/polyphosphatase
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MRILLSNDDGYLAPGLAALYEALRPFADVTVMAPEQNCSGASNSLTLSRPLSLHRSAASGFHYVNGTPTDSVHLALTGML DERPDLVVSGINNGQNMGDDTLYSGTVAAATEGIMFGIPAIAFSLVDKDWVELESAARVAADIVRHFIAQPMPGQPFLNV NIPNLPYAAIKGWQVTRLGKRHPSQPVIRQTNPRGEPIYWIGAAGAALDASDGTDFHATANGYVSITPLQLDLTDTQKLA ATRDWARARSDAS
Sequences:
>Translated_253_residues MRILLSNDDGYLAPGLAALYEALRPFADVTVMAPEQNCSGASNSLTLSRPLSLHRSAASGFHYVNGTPTDSVHLALTGML DERPDLVVSGINNGQNMGDDTLYSGTVAAATEGIMFGIPAIAFSLVDKDWVELESAARVAADIVRHFIAQPMPGQPFLNV NIPNLPYAAIKGWQVTRLGKRHPSQPVIRQTNPRGEPIYWIGAAGAALDASDGTDFHATANGYVSITPLQLDLTDTQKLA ATRDWARARSDAS >Mature_253_residues MRILLSNDDGYLAPGLAALYEALRPFADVTVMAPEQNCSGASNSLTLSRPLSLHRSAASGFHYVNGTPTDSVHLALTGML DERPDLVVSGINNGQNMGDDTLYSGTVAAATEGIMFGIPAIAFSLVDKDWVELESAARVAADIVRHFIAQPMPGQPFLNV NIPNLPYAAIKGWQVTRLGKRHPSQPVIRQTNPRGEPIYWIGAAGAALDASDGTDFHATANGYVSITPLQLDLTDTQKLA ATRDWARARSDAS
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates [H]
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family [H]
Homologues:
Organism=Escherichia coli, GI1789101, Length=245, Percent_Identity=51.0204081632653, Blast_Score=231, Evalue=3e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002828 [H]
Pfam domain/function: PF01975 SurE [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 27027; Mature: 27027
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILLSNDDGYLAPGLAALYEALRPFADVTVMAPEQNCSGASNSLTLSRPLSLHRSAASG CEEEEECCCCCCCCCHHHHHHHHCCHHCEEEECCCCCCCCCCCCEEEECCHHHHHHHHCC FHYVNGTPTDSVHLALTGMLDERPDLVVSGINNGQNMGDDTLYSGTVAAATEGIMFGIPA CEEECCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCEECCCHHHHHCCCEEHHHH IAFSLVDKDWVELESAARVAADIVRHFIAQPMPGQPFLNVNIPNLPYAAIKGWQVTRLGK HHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHCCEEEEEHHC RHPSQPVIRQTNPRGEPIYWIGAAGAALDASDGTDFHATANGYVSITPLQLDLTDTQKLA CCCCCCCEECCCCCCCEEEEEECCCCEEECCCCCCEEEECCCEEEEEEEEEECCCCHHHH ATRDWARARSDAS HHHHHHHHCCCCC >Mature Secondary Structure MRILLSNDDGYLAPGLAALYEALRPFADVTVMAPEQNCSGASNSLTLSRPLSLHRSAASG CEEEEECCCCCCCCCHHHHHHHHCCHHCEEEECCCCCCCCCCCCEEEECCHHHHHHHHCC FHYVNGTPTDSVHLALTGMLDERPDLVVSGINNGQNMGDDTLYSGTVAAATEGIMFGIPA CEEECCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCEECCCHHHHHCCCEEHHHH IAFSLVDKDWVELESAARVAADIVRHFIAQPMPGQPFLNVNIPNLPYAAIKGWQVTRLGK HHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHCCEEEEEHHC RHPSQPVIRQTNPRGEPIYWIGAAGAALDASDGTDFHATANGYVSITPLQLDLTDTQKLA CCCCCCCEECCCCCCCEEEEEECCCCEEECCCCCCEEEECCCEEEEEEEEEECCCCHHHH ATRDWARARSDAS HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA