Click here to switch to the map view.

The map label for this gene is nsrR [H]

Identifier: 238027044

GI number: 238027044

Start: 1564590

End: 1565060

Strand: Direct

Name: nsrR [H]

Synonym: bglu_1g14220

Alternate gene names: 238027044

Gene position: 1564590-1565060 (Clockwise)

Preceding gene: 238027042

Following gene: 238027045

Centisome position: 40.05

GC content: 68.15

Gene sequence:

>471_bases
ATGAGACTGACCGATTACACCGACTATTCGCTGCGCGTGATGCTGTTCCTGGCGGTGCGCGGCGAGGGCCTGTCGACGAT
CCAGGAGATTTCGGACGCCTACGGCATTTCCAAGAACCACCTGATGAAGGTCGTGCAGCGGCTCGGCGAACTGGGCTGGG
TGGAGACCGTGCGCGGGCGCAACGGCGGACTACGGATGAATCCGGCCTCGGCGACGCTGACGGTGGGCGAGGTGGTGCGC
GCGGGCGAGAGCGACTTCGCGCTGGTCGGCTGCTTCGGCGGGGAGGGCGAGGCGATTGCGCATCGCGGCTGCGTGATCGA
GCCGCATTGCCGGCTGAAGGGCGTGCTGGCCGCGGCGCGCGACGCGTTTTTCGCCGAACTCGATCGCCATACGATCGCCG
ACCTGACGCATCCGGGCGCCCAGCTCGCCAGGGCGCTCGGCATCGTGCCGATCCTGGTCGAGCCGGTCTGA

Upstream 100 bases:

>100_bases
TAAAGTGCTTCCAGGGCGCATATTATCCGCAATCCTGACGGACGGGGCCGCGTGCCGGGCGCGCGGGCCCGTCGGGCATT
CCAACGACACGATTTCGCTC

Downstream 100 bases:

>100_bases
GCCGCGGCGCCGCCGCGGCTGGCGACATGGGCCGCGAGTGTGCCGCTCGGCGCCGCGCCCAGGTCGCGCCCGAACCGCGC
CTGAACCGCGCTTGGGCTGC

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MRLTDYTDYSLRVMLFLAVRGEGLSTIQEISDAYGISKNHLMKVVQRLGELGWVETVRGRNGGLRMNPASATLTVGEVVR
AGESDFALVGCFGGEGEAIAHRGCVIEPHCRLKGVLAAARDAFFAELDRHTIADLTHPGAQLARALGIVPILVEPV

Sequences:

>Translated_156_residues
MRLTDYTDYSLRVMLFLAVRGEGLSTIQEISDAYGISKNHLMKVVQRLGELGWVETVRGRNGGLRMNPASATLTVGEVVR
AGESDFALVGCFGGEGEAIAHRGCVIEPHCRLKGVLAAARDAFFAELDRHTIADLTHPGAQLARALGIVPILVEPV
>Mature_156_residues
MRLTDYTDYSLRVMLFLAVRGEGLSTIQEISDAYGISKNHLMKVVQRLGELGWVETVRGRNGGLRMNPASATLTVGEVVR
AGESDFALVGCFGGEGEAIAHRGCVIEPHCRLKGVLAAARDAFFAELDRHTIADLTHPGAQLARALGIVPILVEPV

Specific function: Nitric oxide-responsive transcriptional regulator [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=147, Percent_Identity=38.7755102040816, Blast_Score=117, Evalue=3e-28,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16799; Mature: 16799

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTDYTDYSLRVMLFLAVRGEGLSTIQEISDAYGISKNHLMKVVQRLGELGWVETVRGR
CCCCCCCCHHHEEHEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCC
NGGLRMNPASATLTVGEVVRAGESDFALVGCFGGEGEAIAHRGCVIEPHCRLKGVLAAAR
CCCEEECCCCCEEEHHHHHHCCCCCEEEEEEECCCCCEEECCCCEECCCHHHHHHHHHHH
DAFFAELDRHTIADLTHPGAQLARALGIVPILVEPV
HHHHHHHHHHHHHHCCCCHHHHHHHHCCHHEEEECC
>Mature Secondary Structure
MRLTDYTDYSLRVMLFLAVRGEGLSTIQEISDAYGISKNHLMKVVQRLGELGWVETVRGR
CCCCCCCCHHHEEHEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCC
NGGLRMNPASATLTVGEVVRAGESDFALVGCFGGEGEAIAHRGCVIEPHCRLKGVLAAAR
CCCEEECCCCCEEEHHHHHHCCCCCEEEEEEECCCCCEEECCCCEECCCHHHHHHHHHHH
DAFFAELDRHTIADLTHPGAQLARALGIVPILVEPV
HHHHHHHHHHHHHHCCCCHHHHHHHHCCHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA