| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is thrC [H]
Identifier: 238027038
GI number: 238027038
Start: 1558816
End: 1560267
Strand: Direct
Name: thrC [H]
Synonym: bglu_1g14160
Alternate gene names: 238027038
Gene position: 1558816-1560267 (Clockwise)
Preceding gene: 238027037
Following gene: 238027039
Centisome position: 39.9
GC content: 67.84
Gene sequence:
>1452_bases ATGAATTACATTTCGACGCGCGGCGCCGGCATCGGCGAGCACCATACGTTTTCTGACATCCTGCTCGGCGGCCTGGCGAA GGACGGCGGGCTCTACCTGCCCGCCGAGTACCCGCGCGTGAGCGCGGCTGAGCTCGCACGCTGGCGCGCGCTGCCGTATG CCGACCTCGCTTTCGAGGTGCTCTCGAAGTTCAGCGACGACATCCCCGCCGACGAGCTGCGCGCGCTCACGCGCCGTACC TACCGCGCCGAGGTCTACGCCAACACGCGGCATGGCGAGAACGCGGCCGACATCACGCCGATCAAGCCGCTCGGTACCGA GGGCGGCGCGCCGATCTCGCTGCTCGAACTGTCCAACGGGCCGACGCTCGCGTTCAAGGACATGGCGATGCAGCTGCTCG GCAACCTGTTCGAGGCCACGCTCGCCAAGCACGGCGAGACGCTGAACATCCTCGGCGCGACTTCGGGCGACACCGGCAGC GCGGCCGAGTATGCGATGCGCGGCAAGGTCGGCGTGCGCGTGTTCATGCTCTCGCCGCACGGCAAGATGAGCGCGTTCCA GCGCGCGCAGATGTACAGCCTGCAGGACCCGAACATCTTCAACCTCGCCGTCGAGGGCGTGTTCGACGACGCGCAGGACA TCGTCAAGGCGGTCTCGAACGACCACGCCTTCAAGGCGCGGCACAAGATCGGCACGGTCAACTCGATCAACTGGGCCCGC GTGGTCGCGCAGGTCGTCTACTACTTCAAGGGCTACTTCGCGGCCACCACGAGCAACGAGCAGCGCGTCTCGTTTACGGT GCCGTCGGGCAACTTCGGCAACGTCTGCGCCGGCCACATCGCGCGCATGATGGGCCTGCCGATCGAGAAGCTGGTGGTGG CGACCAACGAGAACGACGTGCTCGACGAGTTCTTCCGCACCGGCCGCTACCGCGTGCGCGGCGCCGCGCAGACCTATCAC ACGAGCAGCCCGAGCATGGACATCTCGAAGGCGTCGAACTTCGAGCGCTTCGTGTTCGACCTGCTCGGCCGCGACCCGGC ACGCGTGCTGCAGCTGTTTCGCGACGTCGAGGAGAAGGGCGGCTTCGATCTGGCGGCGAGCGGCGACTTCGCGCGCGTGG CCGAGTTCGGCTTCGTGTCGGGGCGCAGCACGCACGAGGACCGTCTCGCGACCATCCGCGACGTCTACCAGCGCTACGCG ACGATGATCGACACGCACACGGCCGACGGCGTGAAGGTCGCGCGCGAACACCTGCAGCCGGGCGTGCCGATGGTCGTGCT GGAGACGGCGCAGCCGATCAAGTTCGGCGAGACGATTCGCGAGGCGCTCGGCCGCGAGGCGGAGCGCCCGGCAGGGTTCG AGGGCATCGAGGCGCTGCCGCAGCGCTTCGAGGTCGTGCAGGCCGACGTGCAGCAGGTGAAGGACTTCATCGTCGCGCAT ACGGGCGGCTGA
Upstream 100 bases:
>100_bases GAGCGCAACGTGAACGCCGCGATCGCGCGTATCGAGGCGCTCTCCACGGTGCGCTCGCAGGTCACGAAGCTGCGCATGGA AGCGCTAAACTGAGGACGAC
Downstream 100 bases:
>100_bases GTCCGCGCGAGCCCGTCCCGGCGCTGCGCGCCGGCCGGATCACGGCCGCGACCGGGCAGGGCTTCCGGCGCGGCCGTGCC GTTTGCGGCCGCTGCGGCCC
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MNYISTRGAGIGEHHTFSDILLGGLAKDGGLYLPAEYPRVSAAELARWRALPYADLAFEVLSKFSDDIPADELRALTRRT YRAEVYANTRHGENAADITPIKPLGTEGGAPISLLELSNGPTLAFKDMAMQLLGNLFEATLAKHGETLNILGATSGDTGS AAEYAMRGKVGVRVFMLSPHGKMSAFQRAQMYSLQDPNIFNLAVEGVFDDAQDIVKAVSNDHAFKARHKIGTVNSINWAR VVAQVVYYFKGYFAATTSNEQRVSFTVPSGNFGNVCAGHIARMMGLPIEKLVVATNENDVLDEFFRTGRYRVRGAAQTYH TSSPSMDISKASNFERFVFDLLGRDPARVLQLFRDVEEKGGFDLAASGDFARVAEFGFVSGRSTHEDRLATIRDVYQRYA TMIDTHTADGVKVAREHLQPGVPMVVLETAQPIKFGETIREALGREAERPAGFEGIEALPQRFEVVQADVQQVKDFIVAH TGG
Sequences:
>Translated_483_residues MNYISTRGAGIGEHHTFSDILLGGLAKDGGLYLPAEYPRVSAAELARWRALPYADLAFEVLSKFSDDIPADELRALTRRT YRAEVYANTRHGENAADITPIKPLGTEGGAPISLLELSNGPTLAFKDMAMQLLGNLFEATLAKHGETLNILGATSGDTGS AAEYAMRGKVGVRVFMLSPHGKMSAFQRAQMYSLQDPNIFNLAVEGVFDDAQDIVKAVSNDHAFKARHKIGTVNSINWAR VVAQVVYYFKGYFAATTSNEQRVSFTVPSGNFGNVCAGHIARMMGLPIEKLVVATNENDVLDEFFRTGRYRVRGAAQTYH TSSPSMDISKASNFERFVFDLLGRDPARVLQLFRDVEEKGGFDLAASGDFARVAEFGFVSGRSTHEDRLATIRDVYQRYA TMIDTHTADGVKVAREHLQPGVPMVVLETAQPIKFGETIREALGREAERPAGFEGIEALPQRFEVVQADVQQVKDFIVAH TGG >Mature_483_residues MNYISTRGAGIGEHHTFSDILLGGLAKDGGLYLPAEYPRVSAAELARWRALPYADLAFEVLSKFSDDIPADELRALTRRT YRAEVYANTRHGENAADITPIKPLGTEGGAPISLLELSNGPTLAFKDMAMQLLGNLFEATLAKHGETLNILGATSGDTGS AAEYAMRGKVGVRVFMLSPHGKMSAFQRAQMYSLQDPNIFNLAVEGVFDDAQDIVKAVSNDHAFKARHKIGTVNSINWAR VVAQVVYYFKGYFAATTSNEQRVSFTVPSGNFGNVCAGHIARMMGLPIEKLVVATNENDVLDEFFRTGRYRVRGAAQTYH TSSPSMDISKASNFERFVFDLLGRDPARVLQLFRDVEEKGGFDLAASGDFARVAEFGFVSGRSTHEDRLATIRDVYQRYA TMIDTHTADGVKVAREHLQPGVPMVVLETAQPIKFGETIREALGREAERPAGFEGIEALPQRFEVVQADVQQVKDFIVAH TGG
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Homo sapiens, GI153792148, Length=450, Percent_Identity=34, Blast_Score=210, Evalue=3e-54, Organism=Homo sapiens, GI149193323, Length=472, Percent_Identity=30.7203389830508, Blast_Score=200, Evalue=2e-51, Organism=Escherichia coli, GI1786185, Length=474, Percent_Identity=28.6919831223629, Blast_Score=184, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6319901, Length=472, Percent_Identity=39.1949152542373, Blast_Score=309, Evalue=8e-85,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 52925; Mature: 52925
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYISTRGAGIGEHHTFSDILLGGLAKDGGLYLPAEYPRVSAAELARWRALPYADLAFEV CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHCCCHHHHHHHH LSKFSDDIPADELRALTRRTYRAEVYANTRHGENAADITPIKPLGTEGGAPISLLELSNG HHHHCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC PTLAFKDMAMQLLGNLFEATLAKHGETLNILGATSGDTGSAAEYAMRGKVGVRVFMLSPH CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHCCCCCEEEEEECCC GKMSAFQRAQMYSLQDPNIFNLAVEGVFDDAQDIVKAVSNDHAFKARHKIGTVNSINWAR CHHHHHHHHHHHCCCCCCEEEEEECCHHCCHHHHHHHHCCCCHHHHHHHCCCCCCCHHHH VVAQVVYYFKGYFAATTSNEQRVSFTVPSGNFGNVCAGHIARMMGLPIEKLVVATNENDV HHHHHHHHHHHHEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHCCCHHHEEEECCCCHH LDEFFRTGRYRVRGAAQTYHTSSPSMDISKASNFERFVFDLLGRDPARVLQLFRDVEEKG HHHHHHCCCEEEEECHHHEECCCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHC GFDLAASGDFARVAEFGFVSGRSTHEDRLATIRDVYQRYATMIDTHTADGVKVAREHLQP CEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC GVPMVVLETAQPIKFGETIREALGREAERPAGFEGIEALPQRFEVVQADVQQVKDFIVAH CCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC TGG CCC >Mature Secondary Structure MNYISTRGAGIGEHHTFSDILLGGLAKDGGLYLPAEYPRVSAAELARWRALPYADLAFEV CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHCCCHHHHHHHH LSKFSDDIPADELRALTRRTYRAEVYANTRHGENAADITPIKPLGTEGGAPISLLELSNG HHHHCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC PTLAFKDMAMQLLGNLFEATLAKHGETLNILGATSGDTGSAAEYAMRGKVGVRVFMLSPH CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHCCCCCEEEEEECCC GKMSAFQRAQMYSLQDPNIFNLAVEGVFDDAQDIVKAVSNDHAFKARHKIGTVNSINWAR CHHHHHHHHHHHCCCCCCEEEEEECCHHCCHHHHHHHHCCCCHHHHHHHCCCCCCCHHHH VVAQVVYYFKGYFAATTSNEQRVSFTVPSGNFGNVCAGHIARMMGLPIEKLVVATNENDV HHHHHHHHHHHHEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHCCCHHHEEEECCCCHH LDEFFRTGRYRVRGAAQTYHTSSPSMDISKASNFERFVFDLLGRDPARVLQLFRDVEEKG HHHHHHCCCEEEEECHHHEECCCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHC GFDLAASGDFARVAEFGFVSGRSTHEDRLATIRDVYQRYATMIDTHTADGVKVAREHLQP CEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC GVPMVVLETAQPIKFGETIREALGREAERPAGFEGIEALPQRFEVVQADVQQVKDFIVAH CCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC TGG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8117070 [H]