| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026796
Identifier: 238026796
GI number: 238026796
Start: 1268386
End: 1268829
Strand: Reverse
Name: 238026796
Synonym: bglu_1g11540
Alternate gene names: NA
Gene position: 1268829-1268386 (Counterclockwise)
Preceding gene: 238026797
Following gene: 238026794
Centisome position: 32.48
GC content: 67.34
Gene sequence:
>444_bases ATGAAAGCCTATCTTCGCACCGCGGCCGGGTTGGCCTGCGCCTTACTGACCGCCCTGCCGGCCGCCTCCGCCTTCGCCGT CGAGCCCAAGCCGCTCGACGCCGCGCTCGATTGCTCGTCGAACGGCCATGACTTCGTCGCGCCGCTTGCCGAGGCGGGCG ACCTGCAGCCGAAACCGATGCGCGTCGAATCGAATTCGATGAACGCGTTCCGCACCGCGCATCCGCTCAGTGCCTACGGC TTCCCGGTGTTCGTGGTGGTCGGCTACCAGGAGAACGATCCGCTGTTCCAGCACGGCGACGGCAAACCCATCGGCAAGTG GGGCTATGGCGTGGTGGTGCGCGGCAGCAAGCGCTCGGTGGAGGAAAAGGTGCGCGCGACGGGCAGCAACGCGACGGTCC GGGAAGCGTTTCCGTTCCTCACGGCGATCGTCTGCACCCCGTGA
Upstream 100 bases:
>100_bases GCCACAGGTTGCGGCACCCGGGCCGCGAGAGGCGAGCCCGGGCGTTGCCCGCGCGGCACGACGCCTCCCGGAACCCATGA CATTCACCGATCATCGCCGC
Downstream 100 bases:
>100_bases TGCCGCCGCGGCCCGGGCCCGCGGCCGCCCCCGGCGCGTGCGAGCGAACCGGCAGGCGCGCGCGGCGGCTCAGGCCTCGG TATAGATGACGCGATACGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MKAYLRTAAGLACALLTALPAASAFAVEPKPLDAALDCSSNGHDFVAPLAEAGDLQPKPMRVESNSMNAFRTAHPLSAYG FPVFVVVGYQENDPLFQHGDGKPIGKWGYGVVVRGSKRSVEEKVRATGSNATVREAFPFLTAIVCTP
Sequences:
>Translated_147_residues MKAYLRTAAGLACALLTALPAASAFAVEPKPLDAALDCSSNGHDFVAPLAEAGDLQPKPMRVESNSMNAFRTAHPLSAYG FPVFVVVGYQENDPLFQHGDGKPIGKWGYGVVVRGSKRSVEEKVRATGSNATVREAFPFLTAIVCTP >Mature_147_residues MKAYLRTAAGLACALLTALPAASAFAVEPKPLDAALDCSSNGHDFVAPLAEAGDLQPKPMRVESNSMNAFRTAHPLSAYG FPVFVVVGYQENDPLFQHGDGKPIGKWGYGVVVRGSKRSVEEKVRATGSNATVREAFPFLTAIVCTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15566; Mature: 15566
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAYLRTAAGLACALLTALPAASAFAVEPKPLDAALDCSSNGHDFVAPLAEAGDLQPKPM CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCCEEECCHHHCCCCCCCCE RVESNSMNAFRTAHPLSAYGFPVFVVVGYQENDPLFQHGDGKPIGKWGYGVVVRGSKRSV EEECCCCCCHHCCCCCCCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCEEEEECCCCCH EEKVRATGSNATVREAFPFLTAIVCTP HHHHHHCCCCCCHHHHHHHHEEEEECC >Mature Secondary Structure MKAYLRTAAGLACALLTALPAASAFAVEPKPLDAALDCSSNGHDFVAPLAEAGDLQPKPM CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCCEEECCHHHCCCCCCCCE RVESNSMNAFRTAHPLSAYGFPVFVVVGYQENDPLFQHGDGKPIGKWGYGVVVRGSKRSV EEECCCCCCHHCCCCCCCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCEEEEECCCCCH EEKVRATGSNATVREAFPFLTAIVCTP HHHHHHCCCCCCHHHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA