| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238026687
Identifier: 238026687
GI number: 238026687
Start: 1138807
End: 1139019
Strand: Reverse
Name: 238026687
Synonym: bglu_1g10420
Alternate gene names: NA
Gene position: 1139019-1138807 (Counterclockwise)
Preceding gene: 238026688
Following gene: 238026686
Centisome position: 29.16
GC content: 67.14
Gene sequence:
>213_bases ATGAACTCGATCCGTCGTATTGGGATAGGTGCTTTGTTGATCGCTACAGTGGCGAGTCTCTCGGCCTGCGATTCGATGAC CACGCGCCAGCGCGATACGGCGATCGGTGCCGGCATCGGCGGCGTGGCCGGCGCGGCGATCGGCGGCAACGCGCTGTCGA CGCTCGGCGGCGCCGCGGCGGGCGGCCTGATCGGCAATCAGGTCGGCAAGTAA
Upstream 100 bases:
>100_bases CTTAACAAGTGCTTACAGTCGCAGGCTGCGGCCTCGCTTAGAGTGGTAGCATTGCGCGGCATTGGTACTGCGCTCTTTCC ACTCTTGCGAGGAACCCGTT
Downstream 100 bases:
>100_bases GCGCCGGCCTTCGCAGCCCCCGGCCGCAACGGCGGCGGGCGGTATCGCTCTGGTAGGCGCCTGCTGCCCGCCGCCTTGAT AGCCGCGCCTCGCAGCCGGG
Product: 17 kDa surface antigen
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MNSIRRIGIGALLIATVASLSACDSMTTRQRDTAIGAGIGGVAGAAIGGNALSTLGGAAAGGLIGNQVGK
Sequences:
>Translated_70_residues MNSIRRIGIGALLIATVASLSACDSMTTRQRDTAIGAGIGGVAGAAIGGNALSTLGGAAAGGLIGNQVGK >Mature_70_residues MNSIRRIGIGALLIATVASLSACDSMTTRQRDTAIGAGIGGVAGAAIGGNALSTLGGAAAGGLIGNQVGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6568; Mature: 6568
Theoretical pI: Translated: 11.31; Mature: 11.31
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSIRRIGIGALLIATVASLSACDSMTTRQRDTAIGAGIGGVAGAAIGGNALSTLGGAAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHCCHHH GGLIGNQVGK CCCCCCCCCC >Mature Secondary Structure MNSIRRIGIGALLIATVASLSACDSMTTRQRDTAIGAGIGGVAGAAIGGNALSTLGGAAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHCCHHH GGLIGNQVGK CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA