| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026672
Identifier: 238026672
GI number: 238026672
Start: 1111406
End: 1113379
Strand: Reverse
Name: 238026672
Synonym: bglu_1g10260
Alternate gene names: NA
Gene position: 1113379-1111406 (Counterclockwise)
Preceding gene: 339905962
Following gene: 238026671
Centisome position: 28.5
GC content: 68.59
Gene sequence:
>1974_bases ATGACCGCGCCGACCCAACTCTCCCGCCGCCACGCGCTGAAACTGCTCGTCGGCGCGCCAATGCTGCCGCTTGGCGGCCT CGCCTTGCCCGCGCTGCTGACCGGCTGCGGCAGCGATGAGCCGGGCGGCACGCCGGCCGCCGGCGGCGGCGCCACCTCCG CGGCCAGCTTCGCGGCCGCGGCGTTCGTCTCGATGCCCGCGCCGACGCTCGCCGATCCGGCCGCGATGGCCAGCACCACG GTCGGCTCGACGCTGTCAGTCTCGCTTACCGATGGCAGCACGCACGACTACAAGCTCGCCTACCGGCCGTTCTTCACGAC GGGCGACCGGGTGCCGGACGGCAACGGCGGCACGCTGCTCGCGGGCGGCTACTACGACATCGCCAACCAGCCGATCGTCG ATCGCTCGAAGGCCGGCAGCGAACGCCAGTTCTTCTCGGACTGCCCGGACGGCAGCTCGCTGCTCACGCTGGCCAACGCG AAGGTGCCCGGCGTGAAGGGCCGGCCGGTGTTCGCGGTGGTGCAGTTCGAATACGCCACCCGCAACCAGAACGGCGACTC GACCTACGGCCAGCTGCCGTCGCCGATCGCGGTGCTCACGCTCGACCAGGACCCGGACACCGGCGCGCTCACGCTCGTCA AGTATCACAACGTCGACACCTCGGCGGCGCATGGCCTCTGGATCACCTGCGGCGCGAGCCTGTCGCCCTGGAACACCCAT CTGTCGAGCGAGGAATACGAGCCGGACGCGACCCGGGCCGCCACCGACGCGCAGTTCCTCGCGTTCAGCCGGAACACGTT CGGCAGCGCGGGCGCGGCGAACCCCTACCATTACGGCCACCTGCCCGAGGTGACGGTGAACCCGGACGGCACCGGCACGA TCCGCAAGCACTACTGCCTCGGCCGGATCTCGCACGAGCTGATCCAGGTGATGCCGGACCAGCGGACCGTGATGATGGGC GACGACGCCACCAACGGCGGCCTGTTCATGTTCGTCGCCGACCAGCCGGCCGACCTGTCGGCCGGCACGCTGTACGTGGC GAAGTGGAACCAGACGTCGTCGGCCGGCGCCGGCGCCGCGACGCTGACGTGGCTGCGCATCGGCCACGCCACCAGCGCCG AGATCGAGGCGCTCGCCAACACGCTGAAGGCCTCGGACATCATGGACCTCTCGACCACCGACCCGGCCGACGCGTCGTAC ACCGCGATCCACTACGGCGGCAAGTTCAACTGGATTCGCATCAAGCCGGGCATGGAGAAGGCCGCGGCCTTCCTCGAGAC GCATCGCTACGCCGCGCTGATCGGCGCCAGCATGGGCTTCACGAAGCTCGAGGGCACGACGGTGGACGCACGGGACAAGG TGGTCTACACGGCGATGTCGCGGATCGAGACCTCGATGGTCAAGGGCAACCCGGTATCGCGCGACGTGGCGCTGGATCGC AAGATTTCGGCCGGCGCCGTCTATGCGCTGAACCTCAAGGGCGGCCAGCGCGACACCTCGGGCGCGGCGATCGACAGCGA CTGGGTGCCGGTGGACATGAGCGCGCCGGCCGCCCTGGTGGGCGAGGATCTCGCCACGGCCGACGCGCTCGGCAACACGG CGAACCCGGAGCGGATCGCCAACCCGGACAATCTGAAGTTCTCGCAGAAGCTGCGCACGCTGTTCATCGGCGAGGATTCC GGCATGCACGTGAACAACTTCCTGTGGGCCTACCAGGTCGACACGAAAACGCTCTCGCGCGTGCTGTCGTGCCCGTCCGG GGCGGAATCGACCGGCCTGCACGCGGTCGATGAAATTCATGGCTGGACCTACATCATGAGCAACTTTCAGCACCCCGGCG ATTGGGAGTCGCCGCTTCACGACAAGGTGAAGGCAACGCTCGACCCATTAGTGAGAGCCCGTTACAAGGACCGCTTCGGC GCGAGCGTGGGCTACCTGACAGCCGAAGCCAGCGCGATTCGCCTCGGGAAATGA
Upstream 100 bases:
>100_bases AATACTTTCATATCCCCCGCCTAAACTGCGCCAGGCTCGCCGATGCTTTCCCCAAGCTTTCGGTTTCTCCCTCCCCGCCA CCATACGAACCTGGACACCC
Downstream 100 bases:
>100_bases GGGAGACCAGTCTGTCTATTTTTTGAAACATCGTTTCACCAGCACTCGCCGGAATTCACGACAGCGCGCCGCGGGGTTTC CGCGGCGCGCTTTTTTTCGT
Product: phosphatase-like protein
Products: NA
Alternate protein names: Phosphatase; Exported Alkaline Phosphatase; Phosphatase-Like Protein; Cell Surface Protein; Twin-Arginine Translocation Pathway Signal; Phosphatase Or Zinc Metalloprotease With Signal Peptide; PKD Domain Protein; Lipoprotein
Number of amino acids: Translated: 657; Mature: 656
Protein sequence:
>657_residues MTAPTQLSRRHALKLLVGAPMLPLGGLALPALLTGCGSDEPGGTPAAGGGATSAASFAAAAFVSMPAPTLADPAAMASTT VGSTLSVSLTDGSTHDYKLAYRPFFTTGDRVPDGNGGTLLAGGYYDIANQPIVDRSKAGSERQFFSDCPDGSSLLTLANA KVPGVKGRPVFAVVQFEYATRNQNGDSTYGQLPSPIAVLTLDQDPDTGALTLVKYHNVDTSAAHGLWITCGASLSPWNTH LSSEEYEPDATRAATDAQFLAFSRNTFGSAGAANPYHYGHLPEVTVNPDGTGTIRKHYCLGRISHELIQVMPDQRTVMMG DDATNGGLFMFVADQPADLSAGTLYVAKWNQTSSAGAGAATLTWLRIGHATSAEIEALANTLKASDIMDLSTTDPADASY TAIHYGGKFNWIRIKPGMEKAAAFLETHRYAALIGASMGFTKLEGTTVDARDKVVYTAMSRIETSMVKGNPVSRDVALDR KISAGAVYALNLKGGQRDTSGAAIDSDWVPVDMSAPAALVGEDLATADALGNTANPERIANPDNLKFSQKLRTLFIGEDS GMHVNNFLWAYQVDTKTLSRVLSCPSGAESTGLHAVDEIHGWTYIMSNFQHPGDWESPLHDKVKATLDPLVRARYKDRFG ASVGYLTAEASAIRLGK
Sequences:
>Translated_657_residues MTAPTQLSRRHALKLLVGAPMLPLGGLALPALLTGCGSDEPGGTPAAGGGATSAASFAAAAFVSMPAPTLADPAAMASTT VGSTLSVSLTDGSTHDYKLAYRPFFTTGDRVPDGNGGTLLAGGYYDIANQPIVDRSKAGSERQFFSDCPDGSSLLTLANA KVPGVKGRPVFAVVQFEYATRNQNGDSTYGQLPSPIAVLTLDQDPDTGALTLVKYHNVDTSAAHGLWITCGASLSPWNTH LSSEEYEPDATRAATDAQFLAFSRNTFGSAGAANPYHYGHLPEVTVNPDGTGTIRKHYCLGRISHELIQVMPDQRTVMMG DDATNGGLFMFVADQPADLSAGTLYVAKWNQTSSAGAGAATLTWLRIGHATSAEIEALANTLKASDIMDLSTTDPADASY TAIHYGGKFNWIRIKPGMEKAAAFLETHRYAALIGASMGFTKLEGTTVDARDKVVYTAMSRIETSMVKGNPVSRDVALDR KISAGAVYALNLKGGQRDTSGAAIDSDWVPVDMSAPAALVGEDLATADALGNTANPERIANPDNLKFSQKLRTLFIGEDS GMHVNNFLWAYQVDTKTLSRVLSCPSGAESTGLHAVDEIHGWTYIMSNFQHPGDWESPLHDKVKATLDPLVRARYKDRFG ASVGYLTAEASAIRLGK >Mature_656_residues TAPTQLSRRHALKLLVGAPMLPLGGLALPALLTGCGSDEPGGTPAAGGGATSAASFAAAAFVSMPAPTLADPAAMASTTV GSTLSVSLTDGSTHDYKLAYRPFFTTGDRVPDGNGGTLLAGGYYDIANQPIVDRSKAGSERQFFSDCPDGSSLLTLANAK VPGVKGRPVFAVVQFEYATRNQNGDSTYGQLPSPIAVLTLDQDPDTGALTLVKYHNVDTSAAHGLWITCGASLSPWNTHL SSEEYEPDATRAATDAQFLAFSRNTFGSAGAANPYHYGHLPEVTVNPDGTGTIRKHYCLGRISHELIQVMPDQRTVMMGD DATNGGLFMFVADQPADLSAGTLYVAKWNQTSSAGAGAATLTWLRIGHATSAEIEALANTLKASDIMDLSTTDPADASYT AIHYGGKFNWIRIKPGMEKAAAFLETHRYAALIGASMGFTKLEGTTVDARDKVVYTAMSRIETSMVKGNPVSRDVALDRK ISAGAVYALNLKGGQRDTSGAAIDSDWVPVDMSAPAALVGEDLATADALGNTANPERIANPDNLKFSQKLRTLFIGEDSG MHVNNFLWAYQVDTKTLSRVLSCPSGAESTGLHAVDEIHGWTYIMSNFQHPGDWESPLHDKVKATLDPLVRARYKDRFGA SVGYLTAEASAIRLGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69423; Mature: 69292
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPTQLSRRHALKLLVGAPMLPLGGLALPALLTGCGSDEPGGTPAAGGGATSAASFAAA CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH AFVSMPAPTLADPAAMASTTVGSTLSVSLTDGSTHDYKLAYRPFFTTGDRVPDGNGGTLL HHHHCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCEEEEEECEECCCCCCCCCCCCEEE AGGYYDIANQPIVDRSKAGSERQFFSDCPDGSSLLTLANAKVPGVKGRPVFAVVQFEYAT ECCEEECCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEC RNQNGDSTYGQLPSPIAVLTLDQDPDTGALTLVKYHNVDTSAAHGLWITCGASLSPWNTH CCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCC LSSEEYEPDATRAATDAQFLAFSRNTFGSAGAANPYHYGHLPEVTVNPDGTGTIRKHYCL CCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHH GRISHELIQVMPDQRTVMMGDDATNGGLFMFVADQPADLSAGTLYVAKWNQTSSAGAGAA HHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCE TLTWLRIGHATSAEIEALANTLKASDIMDLSTTDPADASYTAIHYGGKFNWIRIKPGMEK EEEEEEECCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCEEEEEEECCCHHH AAAFLETHRYAALIGASMGFTKLEGTTVDARDKVVYTAMSRIETSMVKGNPVSRDVALDR HHHHHHHHHHHEEHCCCCCCEEECCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEECC KISAGAVYALNLKGGQRDTSGAAIDSDWVPVDMSAPAALVGEDLATADALGNTANPERIA EECCCEEEEEEECCCCCCCCCCEECCCCEEECCCCCHHHHCCHHHHHHHCCCCCCHHHCC NPDNLKFSQKLRTLFIGEDSGMHVNNFLWAYQVDTKTLSRVLSCPSGAESTGLHAVDEIH CCCCCCHHHCEEEEEEECCCCCEECCEEEEEEECHHHHHHHHCCCCCCCCCCCHHHHHHC GWTYIMSNFQHPGDWESPLHDKVKATLDPLVRARYKDRFGASVGYLTAEASAIRLGK CHHEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCC >Mature Secondary Structure TAPTQLSRRHALKLLVGAPMLPLGGLALPALLTGCGSDEPGGTPAAGGGATSAASFAAA CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH AFVSMPAPTLADPAAMASTTVGSTLSVSLTDGSTHDYKLAYRPFFTTGDRVPDGNGGTLL HHHHCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCEEEEEECEECCCCCCCCCCCCEEE AGGYYDIANQPIVDRSKAGSERQFFSDCPDGSSLLTLANAKVPGVKGRPVFAVVQFEYAT ECCEEECCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEC RNQNGDSTYGQLPSPIAVLTLDQDPDTGALTLVKYHNVDTSAAHGLWITCGASLSPWNTH CCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCC LSSEEYEPDATRAATDAQFLAFSRNTFGSAGAANPYHYGHLPEVTVNPDGTGTIRKHYCL CCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHH GRISHELIQVMPDQRTVMMGDDATNGGLFMFVADQPADLSAGTLYVAKWNQTSSAGAGAA HHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCE TLTWLRIGHATSAEIEALANTLKASDIMDLSTTDPADASYTAIHYGGKFNWIRIKPGMEK EEEEEEECCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCEEEEEEECCCHHH AAAFLETHRYAALIGASMGFTKLEGTTVDARDKVVYTAMSRIETSMVKGNPVSRDVALDR HHHHHHHHHHHEEHCCCCCCEEECCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEECC KISAGAVYALNLKGGQRDTSGAAIDSDWVPVDMSAPAALVGEDLATADALGNTANPERIA EECCCEEEEEEECCCCCCCCCCEECCCCEEECCCCCHHHHCCHHHHHHHCCCCCCHHHCC NPDNLKFSQKLRTLFIGEDSGMHVNNFLWAYQVDTKTLSRVLSCPSGAESTGLHAVDEIH CCCCCCHHHCEEEEEEECCCCCEECCEEEEEEECHHHHHHHHCCCCCCCCCCCHHHHHHC GWTYIMSNFQHPGDWESPLHDKVKATLDPLVRARYKDRFGASVGYLTAEASAIRLGK CHHEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA