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The map label for this gene is amtB [C]

Identifier: 339905962

GI number: 339905962

Start: 1113631

End: 1114824

Strand: Reverse

Name: amtB [C]

Synonym: NA

Alternate gene names: 339905962

Gene position: 1114824-1113631 (Counterclockwise)

Preceding gene: 238026679

Following gene: 238026672

Centisome position: 28.54

GC content: 68.76

Gene sequence:

>1194_bases
ATGGACAACCTGAAATCGGCGGCCGACACCTTGTTTCTCCTTCTCGGTGCGGCCATGGTGCTGGCGATGCACGCGGGCTT
CGCCTTCCTCGAGCTCGGCACCGTGCGCAAGAAGAACCAGGTCAACGCACTCGTGAAGATCCTCGTCGACTTCTCGGTGT
CCACCATCGCCTACTTCTTCGTCGGCTACACGGTGGCCTATGGCATCGAGTTCTTCGACGACATCGGCACGCTCGCGCAG
CACAACGGCTACGCGCTGGTGCGCTTCTTCTTCCTGCTGACGTTCGCCGCCGCGATTCCGGCGATCGTCTCGGGCGGCAT
CGCCGAGCGCGCGAAGTTCAACCCGCAGCTGATCGCGACCTCGGTGATCGTGGGCCTCGTCTATCCGTTCTTCGAAGGCA
TCGCCTGGAACAACCGCTTCGGCATCGAGGACTGGCTGGCGCGCGCGTTCGGCGCGCCGTTCCACGATTTCGCCGGCTCG
GTGGTGGTGCATGCGTTCGGCGGCTGGATCGCGCTGCCGGCCGTGATCCTGCTCGGCGCGCGCCATGGCCGCTATTCGAA
GGACGGCCGGATCGCCGCGCATCCGCCCTCGAACATCCCGTTCCTCGCGCTCGGCGCCTGGGTGCTCGCGGTGGGCTGGT
TCGGCTTCAACGTGATGAGCGCGCAGACGCTCGACAAAATCAGCGGGCTGGTGGCCGTCAACTCGCTGATGGCGATGGTG
GGCGGCACGCTGGCCGCCTGGTTCGCGGGCCGCAACGACCCCGGCTTCACCTACAACGGCCCGCTCGCCGGGCTGGTGGC
CGTCTGCGCCGGCTCGGACATCATGCATCCGCTCGGCGCGCTGGCCACCGGCGCGGTGGCGGGCGCGCTGTTCGTGGTGA
TGTTCACCTGCGTGCAGAACCGCTGGCGCATCGACGACGTGCTCGGCGTGTGGCCGCTGCACGGCCTGTGCGGCGCGCTC
GGCGGGATCGCGGCGGGTGTGTTCGGCCAGCCGGCGCTGGGCGGGCTCGGCGGCGTGTCGCTGGTCTCGCAGCTGATCGG
CACGCTCGGCGGGATCGCGATCGCGCTGGCGGGCGGCACGCTGGTCTACGGCGTGCTGAAGCTCACGCTCGGGCTGCGGC
TCGATCAGGAGGCCGAGTTCGACGGGGCCGATCTGTCGATCCATCGCATCACGGCGACGCCGGAGCGCGACTGA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: Rh-like protein/ammonium transporter

Products: NH3 [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:
NA

Sequences:

>Translated_397_residues
MDNLKSAADTLFLLLGAAMVLAMHAGFAFLELGTVRKKNQVNALVKILVDFSVSTIAYFFVGYTVAYGIEFFDDIGTLAQ
HNGYALVRFFFLLTFAAAIPAIVSGGIAERAKFNPQLIATSVIVGLVYPFFEGIAWNNRFGIEDWLARAFGAPFHDFAGS
VVVHAFGGWIALPAVILLGARHGRYSKDGRIAAHPPSNIPFLALGAWVLAVGWFGFNVMSAQTLDKISGLVAVNSLMAMV
GGTLAAWFAGRNDPGFTYNGPLAGLVAVCAGSDIMHPLGALATGAVAGALFVVMFTCVQNRWRIDDVLGVWPLHGLCGAL
GGIAAGVFGQPALGGLGGVSLVSQLIGTLGGIAIALAGGTLVYGVLKLTLGLRLDQEAEFDGADLSIHRITATPERD
>Mature_397_residues
MDNLKSAADTLFLLLGAAMVLAMHAGFAFLELGTVRKKNQVNALVKILVDFSVSTIAYFFVGYTVAYGIEFFDDIGTLAQ
HNGYALVRFFFLLTFAAAIPAIVSGGIAERAKFNPQLIATSVIVGLVYPFFEGIAWNNRFGIEDWLARAFGAPFHDFAGS
VVVHAFGGWIALPAVILLGARHGRYSKDGRIAAHPPSNIPFLALGAWVLAVGWFGFNVMSAQTLDKISGLVAVNSLMAMV
GGTLAAWFAGRNDPGFTYNGPLAGLVAVCAGSDIMHPLGALATGAVAGALFVVMFTCVQNRWRIDDVLGVWPLHGLCGAL
GGIAAGVFGQPALGGLGGVSLVSQLIGTLGGIAIALAGGTLVYGVLKLTLGLRLDQEAEFDGADLSIHRITATPERD

Specific function: Involved In The Uptake Of Ammonia (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ammonium transporter (TC 2.A.49) family [H]

Homologues:

Organism=Escherichia coli, GI1786656, Length=406, Percent_Identity=32.512315270936, Blast_Score=146, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17550180, Length=431, Percent_Identity=29.4663573085847, Blast_Score=144, Evalue=7e-35,
Organism=Caenorhabditis elegans, GI17550182, Length=436, Percent_Identity=29.8165137614679, Blast_Score=142, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI32564042, Length=428, Percent_Identity=27.1028037383178, Blast_Score=121, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI133931100, Length=440, Percent_Identity=27.0454545454545, Blast_Score=99, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6321559, Length=415, Percent_Identity=24.3373493975904, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6325396, Length=414, Percent_Identity=24.1545893719807, Blast_Score=81, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6324187, Length=410, Percent_Identity=27.3170731707317, Blast_Score=80, Evalue=6e-16,
Organism=Drosophila melanogaster, GI161078314, Length=420, Percent_Identity=30.7142857142857, Blast_Score=117, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001905
- InterPro:   IPR018047 [H]

Pfam domain/function: PF00909 Ammonium_transp [H]

EC number: NA

Molecular weight: Translated: 41617; Mature: 41617

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS01219 AMMONIUM_TRANSP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure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HHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NH3 [Periplasm] [C]

Specific reaction: NH3 [Periplasm] = NH3 [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]