| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yceF [C]
Identifier: 238026600
GI number: 238026600
Start: 1024266
End: 1024889
Strand: Reverse
Name: yceF [C]
Synonym: bglu_1g09460
Alternate gene names: 238026600
Gene position: 1024889-1024266 (Counterclockwise)
Preceding gene: 238026623
Following gene: 238026599
Centisome position: 26.24
GC content: 71.31
Gene sequence:
>624_bases ATGACCACGTTTTCCCGTCCGCCCAGGCTGATCCTGGCGTCCAGTTCCCGTTACCGGCGCGAGTTGCTCGAACGCCTGCG GATCCCGTTCGAGGTCGCCACCCCCGATCTCGACGAGACGCCGCGCGCCGGCGAATCGCCGGCCGACACCGCCCTGCGGC TCGCCGCCGACAAGGCACGCGCAGTGGCCGGCCGCGTCGCCGCGCCCGAGGGCGCGATCGTGATCGGCTCCGACCAGGTG GCGACGTTCGACGGCCGCCAGATCGGCAAGCCCGGCACGCACGAACGCGCGCTCGAACAACTGAAATCGATGCAGGGCCG CCATGTCGAATTCCATAGCGCGCTCTGCGTCTACGACAGCCGCACCGGTCGCGCGCAGGTCGAGGACGTCGTCACGCGCG TGCGCTTTCGCTCGCTGTGCGACGCCGAACTCGACGCCTATCTGCGCGCGGAGACGCCCTACGACGTGGCGGGCAGCGCC AAATCGGAGGGGCTCGGCATCGCGCTGCTCGACGCGATCGACGCCGACGATCCGACCGCGCTGGTCGGCCTGCCGCTGAT CGCGCTCACGCGGATGCTGCGCGAGGCCGGCGTGCCGCTGTTCGGCGCGGAGGTGCGGGCATGA
Upstream 100 bases:
>100_bases CCGATGAAAAGCGCAAGACTATATCTGTTTTATCTTTTCGAGTCAATCACTTAAGACCCCGCCTCGCGCCACGCCGCGAG GCCCCTTCCGACGCGCCACG
Downstream 100 bases:
>100_bases CGAAGGGCACGCTTTATCTGATCCCGAACACGCTAGGCGAAGGCGACGCGTCGCTGCTCGCGGCGGTGCTGCCGGCCGCC GTGCAGGCACGCGCCGCCGC
Product: Maf protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MTTFSRPPRLILASSSRYRRELLERLRIPFEVATPDLDETPRAGESPADTALRLAADKARAVAGRVAAPEGAIVIGSDQV ATFDGRQIGKPGTHERALEQLKSMQGRHVEFHSALCVYDSRTGRAQVEDVVTRVRFRSLCDAELDAYLRAETPYDVAGSA KSEGLGIALLDAIDADDPTALVGLPLIALTRMLREAGVPLFGAEVRA
Sequences:
>Translated_207_residues MTTFSRPPRLILASSSRYRRELLERLRIPFEVATPDLDETPRAGESPADTALRLAADKARAVAGRVAAPEGAIVIGSDQV ATFDGRQIGKPGTHERALEQLKSMQGRHVEFHSALCVYDSRTGRAQVEDVVTRVRFRSLCDAELDAYLRAETPYDVAGSA KSEGLGIALLDAIDADDPTALVGLPLIALTRMLREAGVPLFGAEVRA >Mature_206_residues TTFSRPPRLILASSSRYRRELLERLRIPFEVATPDLDETPRAGESPADTALRLAADKARAVAGRVAAPEGAIVIGSDQVA TFDGRQIGKPGTHERALEQLKSMQGRHVEFHSALCVYDSRTGRAQVEDVVTRVRFRSLCDAELDAYLRAETPYDVAGSAK SEGLGIALLDAIDADDPTALVGLPLIALTRMLREAGVPLFGAEVRA
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Escherichia coli, GI87081830, Length=196, Percent_Identity=49.4897959183673, Blast_Score=179, Evalue=1e-46, Organism=Escherichia coli, GI1789646, Length=186, Percent_Identity=32.7956989247312, Blast_Score=82, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 22381; Mature: 22249
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFSRPPRLILASSSRYRRELLERLRIPFEVATPDLDETPRAGESPADTALRLAADKAR CCCCCCCCCEEEECCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH AVAGRVAAPEGAIVIGSDQVATFDGRQIGKPGTHERALEQLKSMQGRHVEFHSALCVYDS HHHCCCCCCCCEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEECCEEEEEEC RTGRAQVEDVVTRVRFRSLCDAELDAYLRAETPYDVAGSAKSEGLGIALLDAIDADDPTA CCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHH LVGLPLIALTRMLREAGVPLFGAEVRA HHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TTFSRPPRLILASSSRYRRELLERLRIPFEVATPDLDETPRAGESPADTALRLAADKAR CCCCCCCCEEEECCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH AVAGRVAAPEGAIVIGSDQVATFDGRQIGKPGTHERALEQLKSMQGRHVEFHSALCVYDS HHHCCCCCCCCEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEECCEEEEEEC RTGRAQVEDVVTRVRFRSLCDAELDAYLRAETPYDVAGSAKSEGLGIALLDAIDADDPTA CCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHH LVGLPLIALTRMLREAGVPLFGAEVRA HHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA