Click here to switch to the map view.

The map label for this gene is rsmI [H]

Identifier: 238026599

GI number: 238026599

Start: 1023547

End: 1024269

Strand: Reverse

Name: rsmI [H]

Synonym: bglu_1g09450

Alternate gene names: 238026599

Gene position: 1024269-1023547 (Counterclockwise)

Preceding gene: 238026600

Following gene: 238026594

Centisome position: 26.22

GC content: 69.43

Gene sequence:

>723_bases
ATGACGAAGGGCACGCTTTATCTGATCCCGAACACGCTAGGCGAAGGCGACGCGTCGCTGCTCGCGGCGGTGCTGCCGGC
CGCCGTGCAGGCACGCGCCGCCGCACTCGGCTATTACATCGGCGAGAACGCGAAGACCACGCGCGCGTTCCTGAAGAAGA
TCGGCACCGAGCGGCCGATCCAGGAAATCGAGATTCGCGAACTGAACGTGAAGACGCCAGCGGGCGAGATCGAGCGGCTG
CTCGGGCCGATCCTCGCCGGCGCCGACGGCGGGCTCGTCTCCGAAGCCGGCGTGCCGGCCGTGGCCGACCCGGGCGCGCT
GCTGGTGCGGCGCGCGCACGAGCGCGGCGTGCGCGTGGTGCCGCTGGTCGGCCCGAGTTCGATCCTGCTCGCCCTGATGG
CCTCCGGCCTGAACGGCCAGACCTTCGCTTTCCACGGCTACCTGCCGGTCGACGCGGCCGCGCGCGCGAAGCGCCTGCGC
GAACTCGAACAGCAGTCGCGCAAGACCAGGGAAACCGAAATCTTCATCGAGACGCCGTATCGCAACCAGGCGATGCTGGA
GGCGCTGCTCGCGAGTTGCGCGCCGTCCACGCTGATCTGCATCGCGGCGGACCTGACGCTCGACACCGAGACGATCGTGA
GCCGCAGCGCGGCCGACTGGAAGAAGGCGCCGCCCCTCAACCTGCAGAAGCGGCCGGCGATCTTCCTGCTGCTCGCGAAC
TGA

Upstream 100 bases:

>100_bases
ACGCCGACGATCCGACCGCGCTGGTCGGCCTGCCGCTGATCGCGCTCACGCGGATGCTGCGCGAGGCCGGCGTGCCGCTG
TTCGGCGCGGAGGTGCGGGC

Downstream 100 bases:

>100_bases
GCGGCCCGGGCGGCAGCCCTTGCCGCCTCGCCCGCCGGGGCCCGCCTGCTTGACCGCCGGCCGTCAGCGCAGCCGGACCG
CGCTGTCCGACAGCGCCGAT

Product: Tetrapyrrole methylase family protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTKGTLYLIPNTLGEGDASLLAAVLPAAVQARAAALGYYIGENAKTTRAFLKKIGTERPIQEIEIRELNVKTPAGEIERL
LGPILAGADGGLVSEAGVPAVADPGALLVRRAHERGVRVVPLVGPSSILLALMASGLNGQTFAFHGYLPVDAAARAKRLR
ELEQQSRKTRETEIFIETPYRNQAMLEALLASCAPSTLICIAADLTLDTETIVSRSAADWKKAPPLNLQKRPAIFLLLAN

Sequences:

>Translated_240_residues
MTKGTLYLIPNTLGEGDASLLAAVLPAAVQARAAALGYYIGENAKTTRAFLKKIGTERPIQEIEIRELNVKTPAGEIERL
LGPILAGADGGLVSEAGVPAVADPGALLVRRAHERGVRVVPLVGPSSILLALMASGLNGQTFAFHGYLPVDAAARAKRLR
ELEQQSRKTRETEIFIETPYRNQAMLEALLASCAPSTLICIAADLTLDTETIVSRSAADWKKAPPLNLQKRPAIFLLLAN
>Mature_239_residues
TKGTLYLIPNTLGEGDASLLAAVLPAAVQARAAALGYYIGENAKTTRAFLKKIGTERPIQEIEIRELNVKTPAGEIERLL
GPILAGADGGLVSEAGVPAVADPGALLVRRAHERGVRVVPLVGPSSILLALMASGLNGQTFAFHGYLPVDAAARAKRLRE
LEQQSRKTRETEIFIETPYRNQAMLEALLASCAPSTLICIAADLTLDTETIVSRSAADWKKAPPLNLQKRPAIFLLLAN

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=211, Percent_Identity=32.2274881516588, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 25598; Mature: 25467

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKGTLYLIPNTLGEGDASLLAAVLPAAVQARAAALGYYIGENAKTTRAFLKKIGTERPI
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCH
QEIEIRELNVKTPAGEIERLLGPILAGADGGLVSEAGVPAVADPGALLVRRAHERGVRVV
HHEEEEEEECCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHCCCEEE
PLVGPSSILLALMASGLNGQTFAFHGYLPVDAAARAKRLRELEQQSRKTRETEIFIETPY
EEECHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
RNQAMLEALLASCAPSTLICIAADLTLDTETIVSRSAADWKKAPPLNLQKRPAIFLLLAN
CCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
TKGTLYLIPNTLGEGDASLLAAVLPAAVQARAAALGYYIGENAKTTRAFLKKIGTERPI
CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCH
QEIEIRELNVKTPAGEIERLLGPILAGADGGLVSEAGVPAVADPGALLVRRAHERGVRVV
HHEEEEEEECCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHCCCEEE
PLVGPSSILLALMASGLNGQTFAFHGYLPVDAAARAKRLRELEQQSRKTRETEIFIETPY
EEECHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
RNQAMLEALLASCAPSTLICIAADLTLDTETIVSRSAADWKKAPPLNLQKRPAIFLLLAN
CCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]