| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026581
Identifier: 238026581
GI number: 238026581
Start: 1003153
End: 1003935
Strand: Reverse
Name: 238026581
Synonym: bglu_1g09260
Alternate gene names: NA
Gene position: 1003935-1003153 (Counterclockwise)
Preceding gene: 238026582
Following gene: 238026580
Centisome position: 25.7
GC content: 65.9
Gene sequence:
>783_bases ATGGGACAGATCACCCTGTCGATCAAGGACGACACCATCACGTCGCTGCGCAAGGACTTCGAGGCCTTCGTGCGCGTGTC GCAGAAGCTCGATCCGCAGTTCGCGACGCCGTCGTTCGAAGACTTCCTGCGCGCCAAGCTGCTCGACAACATGGTGCCGC TGACCGAGAACGCCGTGCAGCGCATGCTGCAGGGCGGCCAGTACGCGTGGGCGAAACGCACACTCGACAAGGAATTCCCC GACGTGCTCGCGATCATGATGCGGCAGGCGGAGAGCTTCGGCTTCGGCTTCGCGTCGCGCAGCGAATGGACCCCTGACGA GCTCGTGAAGGCGTGCCAGGACTGGGCCACCGCGCTCGTCACGGAAGCGCAGGGCGATCCGGCCCAGATCGAGCCGCTCG CCGCGCAGATCAAATCCGCGGTCCACGACATCCAGACGCTCGAGGAACGGATGCAGACGCCCGCCTGGCGGCTCGCCGAA TCGCTGCGCCAGCGCGTCTACGAGGCGAAGCTCGCCTGCGAGATGAGCGTCGGCAGCCTGGCGCGCGAGAAGCTCGGCGA GTTGCGCGGGCTGCTGCGGCTCGGCATCTCGCACGGCTCGTTCCAGAAGCAGGAAGCCCAGCAGATCATGGAATACCTGC GCCTGCTGAAGCCGGAAATCTTTGTCGAGGAACCCTACGACATCTTCTCGCGGCTCGCCGGGTGGCTGCGCGGGATCTTC CTGGTGGCTGCGCCGATGCAGCCCAAGGCGCCGGTTCAGCAAAAGCAGCAGCGCAGGCCGTAA
Upstream 100 bases:
>100_bases CTCGCGAATTTCGGCGCGCCGCCCTCAAGTTTCTTCGCCGGGCGCCGATATAAGAGGAAAACCACCCTGGCGCCGGCCGC CAACGCGCTTCGAGAGATTC
Downstream 100 bases:
>100_bases TCCCGCCCGCGGCCGCGCCGGCCCGCTCGACGCGGCATCCGGCCCGGGCGCGCAGCCGCGGCTCACGCGCGTCGGGACTG CCACGCGCAGGCCGCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MGQITLSIKDDTITSLRKDFEAFVRVSQKLDPQFATPSFEDFLRAKLLDNMVPLTENAVQRMLQGGQYAWAKRTLDKEFP DVLAIMMRQAESFGFGFASRSEWTPDELVKACQDWATALVTEAQGDPAQIEPLAAQIKSAVHDIQTLEERMQTPAWRLAE SLRQRVYEAKLACEMSVGSLAREKLGELRGLLRLGISHGSFQKQEAQQIMEYLRLLKPEIFVEEPYDIFSRLAGWLRGIF LVAAPMQPKAPVQQKQQRRP
Sequences:
>Translated_260_residues MGQITLSIKDDTITSLRKDFEAFVRVSQKLDPQFATPSFEDFLRAKLLDNMVPLTENAVQRMLQGGQYAWAKRTLDKEFP DVLAIMMRQAESFGFGFASRSEWTPDELVKACQDWATALVTEAQGDPAQIEPLAAQIKSAVHDIQTLEERMQTPAWRLAE SLRQRVYEAKLACEMSVGSLAREKLGELRGLLRLGISHGSFQKQEAQQIMEYLRLLKPEIFVEEPYDIFSRLAGWLRGIF LVAAPMQPKAPVQQKQQRRP >Mature_259_residues GQITLSIKDDTITSLRKDFEAFVRVSQKLDPQFATPSFEDFLRAKLLDNMVPLTENAVQRMLQGGQYAWAKRTLDKEFPD VLAIMMRQAESFGFGFASRSEWTPDELVKACQDWATALVTEAQGDPAQIEPLAAQIKSAVHDIQTLEERMQTPAWRLAES LRQRVYEAKLACEMSVGSLAREKLGELRGLLRLGISHGSFQKQEAQQIMEYLRLLKPEIFVEEPYDIFSRLAGWLRGIFL VAAPMQPKAPVQQKQQRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29601; Mature: 29470
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQITLSIKDDTITSLRKDFEAFVRVSQKLDPQFATPSFEDFLRAKLLDNMVPLTENAVQ CCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH RMLQGGQYAWAKRTLDKEFPDVLAIMMRQAESFGFGFASRSEWTPDELVKACQDWATALV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH TEAQGDPAQIEPLAAQIKSAVHDIQTLEERMQTPAWRLAESLRQRVYEAKLACEMSVGSL HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AREKLGELRGLLRLGISHGSFQKQEAQQIMEYLRLLKPEIFVEEPYDIFSRLAGWLRGIF HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHH LVAAPMQPKAPVQQKQQRRP HHHCCCCCCCCHHHHHCCCC >Mature Secondary Structure GQITLSIKDDTITSLRKDFEAFVRVSQKLDPQFATPSFEDFLRAKLLDNMVPLTENAVQ CEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH RMLQGGQYAWAKRTLDKEFPDVLAIMMRQAESFGFGFASRSEWTPDELVKACQDWATALV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH TEAQGDPAQIEPLAAQIKSAVHDIQTLEERMQTPAWRLAESLRQRVYEAKLACEMSVGSL HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AREKLGELRGLLRLGISHGSFQKQEAQQIMEYLRLLKPEIFVEEPYDIFSRLAGWLRGIF HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHH LVAAPMQPKAPVQQKQQRRP HHHCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA