| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yjgA [C]
Identifier: 238026570
GI number: 238026570
Start: 990430
End: 991041
Strand: Reverse
Name: yjgA [C]
Synonym: bglu_1g09140
Alternate gene names: 238026570
Gene position: 991041-990430 (Counterclockwise)
Preceding gene: 238026572
Following gene: 238026569
Centisome position: 25.37
GC content: 68.79
Gene sequence:
>612_bases ATGAACCGCAAAACCCGTATCCAACCGATCGAGCCCGCCGACGACGACAGCGGCCACGGCTACGACCGCCCCAGCAAGTC GCAACTGAAACGCGAGATGCATGCGCTGCAGCAGCTTGGCCGCGACCTGGTCGAGCTGCCGAAGGACGCGCTCAAGCGCA TGCCGATGCCGGAGAGCCTCGGCGACGCCGTGCGCGAGGCGCGCCGCATCACCGACCACGAAGGCAAGCGCCGCCAGCTG CAGTACATCGGCAAGGTGATGCGCGTGCTGACCGAGCCCGAGATCGAGGCGCTCAAGTCCGCGCTCGACGCCCAGCGCGG CGTGAACAAGGCCGAAACCGCGCGGCTGCACTGGATCGAGCGCACGCGCGACCAGCTGCTCGCCGCCGACGAGGCGCTGA CCGCCTTCATCCGCGACTATCCGGCCGCCGACGTGCAGGAAGGCCGCACGCTGATCCGCAACGCGCGCAAGGAAGCCGAG CAGGGCAAGCCGCCGCGCTACTTCCGCGAGCTGTTCCAGTGGATCAAGACCGCGAGCGGCACGCCGGGCGAGGCCGACGG CGAGCGCGACGAGGATCACGACGAGGATCACGACCATGACGACGAAGCGTAA
Upstream 100 bases:
>100_bases GCGTATCCCGCGATCATAACAAGGTCCGGCCGCCGCCACCTACCCATGCCGCCCCCTCCGCGCGACCGGCGGCGGCTCGC GGCGCGATACAATCTCGCCC
Downstream 100 bases:
>100_bases GCACCCCGACGAACTGATCGTCGGCCTCGTGTCGATCAGCGACCGCGCGAGCCGCGGCGACTACCAGGACCAGGGCATCC CGGCGCTCGAAGGCTGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MNRKTRIQPIEPADDDSGHGYDRPSKSQLKREMHALQQLGRDLVELPKDALKRMPMPESLGDAVREARRITDHEGKRRQL QYIGKVMRVLTEPEIEALKSALDAQRGVNKAETARLHWIERTRDQLLAADEALTAFIRDYPAADVQEGRTLIRNARKEAE QGKPPRYFRELFQWIKTASGTPGEADGERDEDHDEDHDHDDEA
Sequences:
>Translated_203_residues MNRKTRIQPIEPADDDSGHGYDRPSKSQLKREMHALQQLGRDLVELPKDALKRMPMPESLGDAVREARRITDHEGKRRQL QYIGKVMRVLTEPEIEALKSALDAQRGVNKAETARLHWIERTRDQLLAADEALTAFIRDYPAADVQEGRTLIRNARKEAE QGKPPRYFRELFQWIKTASGTPGEADGERDEDHDEDHDHDDEA >Mature_203_residues MNRKTRIQPIEPADDDSGHGYDRPSKSQLKREMHALQQLGRDLVELPKDALKRMPMPESLGDAVREARRITDHEGKRRQL QYIGKVMRVLTEPEIEALKSALDAQRGVNKAETARLHWIERTRDQLLAADEALTAFIRDYPAADVQEGRTLIRNARKEAE QGKPPRYFRELFQWIKTASGTPGEADGERDEDHDEDHDHDDEA
Specific function: Unknown
COG id: COG3028
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0307 family [H]
Homologues:
Organism=Escherichia coli, GI1790681, Length=160, Percent_Identity=38.75, Blast_Score=108, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023153 - InterPro: IPR006839 [H]
Pfam domain/function: PF04751 DUF615 [H]
EC number: NA
Molecular weight: Translated: 23326; Mature: 23326
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKTRIQPIEPADDDSGHGYDRPSKSQLKREMHALQQLGRDLVELPKDALKRMPMPESL CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH GDAVREARRITDHEGKRRQLQYIGKVMRVLTEPEIEALKSALDAQRGVNKAETARLHWIE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH RTRDQLLAADEALTAFIRDYPAADVQEGRTLIRNARKEAEQGKPPRYFRELFQWIKTASG HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC TPGEADGERDEDHDEDHDHDDEA CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNRKTRIQPIEPADDDSGHGYDRPSKSQLKREMHALQQLGRDLVELPKDALKRMPMPESL CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH GDAVREARRITDHEGKRRQLQYIGKVMRVLTEPEIEALKSALDAQRGVNKAETARLHWIE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH RTRDQLLAADEALTAFIRDYPAADVQEGRTLIRNARKEAEQGKPPRYFRELFQWIKTASG HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC TPGEADGERDEDHDEDHDHDDEA CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA