| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is dfrA [H]
Identifier: 238026572
GI number: 238026572
Start: 992671
End: 993174
Strand: Reverse
Name: dfrA [H]
Synonym: bglu_1g09160
Alternate gene names: 238026572
Gene position: 993174-992671 (Counterclockwise)
Preceding gene: 238026574
Following gene: 238026570
Centisome position: 25.42
GC content: 71.83
Gene sequence:
>504_bases ATGACGACCCTGAGCCTGATCGTCGCGCGCGCCCGCAACGGCGTGATCGGCCGCGACAACCAGCTTCCCTGGAAGCTCCC CGAGGATCTCGCGTTCTTCAAGCGCACCACGATGGGCGCGCCGATCGTGATGGGCCGCAAGACCCACGAATCGATCGGCA GGCCGCTGCCGGGGCGCCGCAACATCGTCGTCACGCGCGACGCGACGCGGCGCTTCGACGGCTGCGACGTGGCCGGCTCG CTGGCCGAGGCGCTCGCGGCGGCGGCACGCGACGGCGCGGCCGAAGCCTTCCTGATCGGCGGCGCGCAGCTGTACGCCGA GGGGCTGCACGCCGCCGACAAGCTGATCGTCACCGAGATCGACGCCGATTTCGACGGCGACGCGCATTTCCCGGCCCCCG ATCCGGCGCAGTGGCGCGAGGTGTCGCGCGAGCGCCATCATGCGGCCGCGCCGAACGACTTCGACTACGCGTTCGTGGTC TACGTGCGCGCGCCTGCGCCCTGA
Upstream 100 bases:
>100_bases GCGGCCAGGCGCCCGGCAGGCAGCGACGCGCACCCGCCGGCCGGCCCCGCCCGGCGATCCGGTAGAATCGGCGGCTTTCC CGCCCGCCCCCGGATCTCCC
Downstream 100 bases:
>100_bases CGAGCCCGGCCCGCTGCCTGCCTGCGCCCCCACCGCGCCGATAAAAAAAAGCGCCGCTTCGCGCGGCGCTTCCTGCTTCA GCCCGGCGCGGGGCAAGCCC
Product: dihydrofolate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTTLSLIVARARNGVIGRDNQLPWKLPEDLAFFKRTTMGAPIVMGRKTHESIGRPLPGRRNIVVTRDATRRFDGCDVAGS LAEALAAAARDGAAEAFLIGGAQLYAEGLHAADKLIVTEIDADFDGDAHFPAPDPAQWREVSRERHHAAAPNDFDYAFVV YVRAPAP
Sequences:
>Translated_167_residues MTTLSLIVARARNGVIGRDNQLPWKLPEDLAFFKRTTMGAPIVMGRKTHESIGRPLPGRRNIVVTRDATRRFDGCDVAGS LAEALAAAARDGAAEAFLIGGAQLYAEGLHAADKLIVTEIDADFDGDAHFPAPDPAQWREVSRERHHAAAPNDFDYAFVV YVRAPAP >Mature_166_residues TTLSLIVARARNGVIGRDNQLPWKLPEDLAFFKRTTMGAPIVMGRKTHESIGRPLPGRRNIVVTRDATRRFDGCDVAGSL AEALAAAARDGAAEAFLIGGAQLYAEGLHAADKLIVTEIDADFDGDAHFPAPDPAQWREVSRERHHAAAPNDFDYAFVVY VRAPAP
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=155, Percent_Identity=31.6129032258064, Blast_Score=70, Evalue=8e-13, Organism=Escherichia coli, GI1786233, Length=160, Percent_Identity=45, Blast_Score=135, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17505899, Length=183, Percent_Identity=30.6010928961749, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI116008026, Length=157, Percent_Identity=33.1210191082803, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24647458, Length=157, Percent_Identity=33.1210191082803, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 18119; Mature: 17987
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLSLIVARARNGVIGRDNQLPWKLPEDLAFFKRTTMGAPIVMGRKTHESIGRPLPGRR CCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCC NIVVTRDATRRFDGCDVAGSLAEALAAAARDGAAEAFLIGGAQLYAEGLHAADKLIVTEI CEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCEEEEEEE DADFDGDAHFPAPDPAQWREVSRERHHAAAPNDFDYAFVVYVRAPAP CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCC >Mature Secondary Structure TTLSLIVARARNGVIGRDNQLPWKLPEDLAFFKRTTMGAPIVMGRKTHESIGRPLPGRR CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCC NIVVTRDATRRFDGCDVAGSLAEALAAAARDGAAEAFLIGGAQLYAEGLHAADKLIVTEI CEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCEEEEEEE DADFDGDAHFPAPDPAQWREVSRERHHAAAPNDFDYAFVVYVRAPAP CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2840350; 9384377 [H]