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The map label for this gene is orn [H]

Identifier: 238026568

GI number: 238026568

Start: 989137

End: 989745

Strand: Direct

Name: orn [H]

Synonym: bglu_1g09120

Alternate gene names: 238026568

Gene position: 989137-989745 (Clockwise)

Preceding gene: 238026564

Following gene: 238026571

Centisome position: 25.32

GC content: 65.85

Gene sequence:

>609_bases
ATGACCGAAACCCCCGAACCCGCCGGCCAGAGCGCGCTCGTGCGCAACGAACTGAATCTCGTCTGGCTCGACATGGAAAT
GACGGGTTTGAACCCGGATAGCGACCGCATCATCGAGATCGCCGTGGTCGTCACGAACTCGACGCTCGACAAGGCCGTGG
AAGGCCCGGTGCTCGCGATCCACCAGAGCGACGAGACGCTCGCGAAGATGGACGCCTGGAACCAGTCGACGCACGGCCGC
TCGGGCCTGATCGACCGCGTGCGCGCCTCGACCGTGAGCGAGGCCGCGGCCGCCGCACAGATCGAGGCGTTCCTCGCGCA
GTACGTGTCGCCCGGCAAATCGCCGATGTGCGGCAACTCGATCTGCCAGGACCGCCGCTTCATGGCGCGCTGGATGCCCG
AGCTCGAGCGCTTCTTCCATTACCGGAACCTCGACGTCAGCACGCTGAAGGAGCTGTGCCGCCGCTGGCAGCCGGCTGTC
TACAAGGGCTTCCAGAAGCGCGCGATGCATACGGCGCTGGCCGACATCCACGAGTCGATCGACGAGCTCAAGTATTACCG
CGAGCATTTCCTGATTCCGGCCGCGAGCACCGCGCCCGACGGCGTCTGA

Upstream 100 bases:

>100_bases
TCTATGCGAGAATTATATGTTCTTGCGGTCGGGGCCCGCTCATCGGTCTTCGGCTGCCTTGGCGGCGCATTCGCCACCGC
CGATTCTCCAGGAAAACCGT

Downstream 100 bases:

>100_bases
CGCTGCGCGCGAAGGTGGCGCACGGCGGCGCACGGCGGCGCGCGCGGGGACGGCCATGGCCGTGGCCGCGCCGGGCCTCA
CGCCTCGCGCGGCGGCCGCT

Product: oligoribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MTETPEPAGQSALVRNELNLVWLDMEMTGLNPDSDRIIEIAVVVTNSTLDKAVEGPVLAIHQSDETLAKMDAWNQSTHGR
SGLIDRVRASTVSEAAAAAQIEAFLAQYVSPGKSPMCGNSICQDRRFMARWMPELERFFHYRNLDVSTLKELCRRWQPAV
YKGFQKRAMHTALADIHESIDELKYYREHFLIPAASTAPDGV

Sequences:

>Translated_202_residues
MTETPEPAGQSALVRNELNLVWLDMEMTGLNPDSDRIIEIAVVVTNSTLDKAVEGPVLAIHQSDETLAKMDAWNQSTHGR
SGLIDRVRASTVSEAAAAAQIEAFLAQYVSPGKSPMCGNSICQDRRFMARWMPELERFFHYRNLDVSTLKELCRRWQPAV
YKGFQKRAMHTALADIHESIDELKYYREHFLIPAASTAPDGV
>Mature_201_residues
TETPEPAGQSALVRNELNLVWLDMEMTGLNPDSDRIIEIAVVVTNSTLDKAVEGPVLAIHQSDETLAKMDAWNQSTHGRS
GLIDRVRASTVSEAAAAAQIEAFLAQYVSPGKSPMCGNSICQDRRFMARWMPELERFFHYRNLDVSTLKELCRRWQPAVY
KGFQKRAMHTALADIHESIDELKYYREHFLIPAASTAPDGV

Specific function: 3'-to-5' exoribonuclease specific for small oligoribonucleotides [H]

COG id: COG1949

COG function: function code A; Oligoribonuclease (3'->5' exoribonuclease)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 exonuclease domain [H]

Homologues:

Organism=Homo sapiens, GI224496106, Length=185, Percent_Identity=44.3243243243243, Blast_Score=166, Evalue=1e-41,
Organism=Escherichia coli, GI87082382, Length=176, Percent_Identity=59.6590909090909, Blast_Score=231, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI17557752, Length=182, Percent_Identity=42.8571428571429, Blast_Score=160, Evalue=6e-40,
Organism=Saccharomyces cerevisiae, GI6323088, Length=188, Percent_Identity=38.2978723404255, Blast_Score=117, Evalue=1e-27,
Organism=Drosophila melanogaster, GI21355135, Length=174, Percent_Identity=39.0804597701149, Blast_Score=148, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR022894
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 22664; Mature: 22533

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETPEPAGQSALVRNELNLVWLDMEMTGLNPDSDRIIEIAVVVTNSTLDKAVEGPVLAI
CCCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCHHHHHHCCCEEEE
HQSDETLAKMDAWNQSTHGRSGLIDRVRASTVSEAAAAAQIEAFLAQYVSPGKSPMCGNS
ECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ICQDRRFMARWMPELERFFHYRNLDVSTLKELCRRWQPAVYKGFQKRAMHTALADIHESI
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
DELKYYREHFLIPAASTAPDGV
HHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TETPEPAGQSALVRNELNLVWLDMEMTGLNPDSDRIIEIAVVVTNSTLDKAVEGPVLAI
CCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCHHHHHHCCCEEEE
HQSDETLAKMDAWNQSTHGRSGLIDRVRASTVSEAAAAAQIEAFLAQYVSPGKSPMCGNS
ECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ICQDRRFMARWMPELERFFHYRNLDVSTLKELCRRWQPAVYKGFQKRAMHTALADIHESI
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
DELKYYREHFLIPAASTAPDGV
HHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA