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The map label for this gene is ybaV [C]

Identifier: 238026543

GI number: 238026543

Start: 965365

End: 965688

Strand: Direct

Name: ybaV [C]

Synonym: bglu_1g08870

Alternate gene names: 238026543

Gene position: 965365-965688 (Clockwise)

Preceding gene: 238026542

Following gene: 238026544

Centisome position: 24.71

GC content: 70.06

Gene sequence:

>324_bases
ATGCTGAAGAAGATTCTGTTGGTGGCGATGTGGTTCGCGGGGCTTGCGCAGGCGTGGGCCGCCGTCGACGTCAATCAGGC
GAACAGCGACGCGCTGCGTGGCATCAAGGGCATCGGCGTCGCGAAAGCGCAGGCGATCGTCGACGAGCGCAACGCGCACG
GGCCGTACAAGGATGCCGCGGACCTGGCGCGGCGCGTCAAGGGCATCGGCCCGAAATCGGTCGGTCGGCTGGTGTCCGAG
GGTCTCACGGTCGGTCCTGCCAAGGCTGCGGCGTCGCCCGCCGCGCGCGGCGCTGCCGCGCGGAACAAGGCCGCGCGCAA
GTGA

Upstream 100 bases:

>100_bases
TGCGTTGGCTGTTCGGCCAGCTGTGAGCGTCCCGGCATCGTCCCTACACTGGGTCTCACGGTCGGCAGCCGCCGGCCGTT
TTTCTTGATGGGAGATCCCG

Downstream 100 bases:

>100_bases
CGCCGCCCGCGCGCGGCAGGCGCGCGGTGCGGCAGGCCTCGGCGTGACTCCTTCAGCCGTCCTGGTTCGACGGTTTTCCC
GCAGCGTCGCCGCGGGTTTT

Product: competence protein ComE

Products: NA

Alternate protein names: ComEA-Related Signal Peptide Protein; Helix-Hairpin-Helix Motif Protein; Competence Protein ComEA Helix-Hairpin-Helix Region; DNA Uptake Protein ComEA-Like; Competence Protein ComEA Helix-Hairpin-Helix Repeat Protein; Helix-Turn-Helix Protein; DNA Uptake Protein; ComE Protein

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MLKKILLVAMWFAGLAQAWAAVDVNQANSDALRGIKGIGVAKAQAIVDERNAHGPYKDAADLARRVKGIGPKSVGRLVSE
GLTVGPAKAAASPAARGAAARNKAARK

Sequences:

>Translated_107_residues
MLKKILLVAMWFAGLAQAWAAVDVNQANSDALRGIKGIGVAKAQAIVDERNAHGPYKDAADLARRVKGIGPKSVGRLVSE
GLTVGPAKAAASPAARGAAARNKAARK
>Mature_107_residues
MLKKILLVAMWFAGLAQAWAAVDVNQANSDALRGIKGIGVAKAQAIVDERNAHGPYKDAADLARRVKGIGPKSVGRLVSE
GLTVGPAKAAASPAARGAAARNKAARK

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10983; Mature: 10983

Theoretical pI: Translated: 11.50; Mature: 11.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKILLVAMWFAGLAQAWAAVDVNQANSDALRGIKGIGVAKAQAIVDERNAHGPYKDAA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHH
DLARRVKGIGPKSVGRLVSEGLTVGPAKAAASPAARGAAARNKAARK
HHHHHHHCCCHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MLKKILLVAMWFAGLAQAWAAVDVNQANSDALRGIKGIGVAKAQAIVDERNAHGPYKDAA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHH
DLARRVKGIGPKSVGRLVSEGLTVGPAKAAASPAARGAAARNKAARK
HHHHHHHCCCHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA