| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is hldE [H]
Identifier: 238026541
GI number: 238026541
Start: 963263
End: 964243
Strand: Direct
Name: hldE [H]
Synonym: bglu_1g08850
Alternate gene names: 238026541
Gene position: 963263-964243 (Clockwise)
Preceding gene: 238026540
Following gene: 238026542
Centisome position: 24.66
GC content: 72.17
Gene sequence:
>981_bases ATGTCGCCGCTCACTCCTCCACGCGCGGCTGAGGCCGCGCCCGCCGTGCCCGCGTCCGTCGCGCGCGAGCGCCTCGCCGC CTCGCGCGTGCTGGTGGTCGGCGACGTGATGCTGGACCGCTACTGGTTCGGCAACGTGAACCGCATCTCGCCGGAGGCGC CGGTGCCGGTCGTCCACGTGCAGCGCCAGGAGGAGCGGCTCGGCGGCGCCGCGAACGTCGCGCGCAACATCGTGACGCTC GGCGCGGCCGCGGGGCTGCTCTGCGTGGTCGGCACCGACGAGCCGGGCGAGCGTATCGTCGGGCTGCTCGGCGAGAGCGG CGTCGAGACCCATCTCGAACGCGACGCGCTGTTGCCCACCACCATCAAGCTGCGCGTGCTCGCGCAGCAGCAGCAACTGC TGCGCGTGGACTTCGAGGCGGCGCCGCAGCACGAGGTGCTGCTGGCCGGCCTGGCGCGCTTCGAGACGCTGCTGCCCTCG TATGGCGTCGTGCTGATGTCCGACTATGCCAAGGGCGGCCTTACCCACGTGACCACCATGATCGCGACTGCGCGCGCGGC CGGGTTGCCGGTGCTGGTCGATCCGAAGGGCGCCGACTGGGCGCGCTACCGCGGCGCCTCGCTGATCACGCCGAACCGCG CCGAACTGCGCGAGGTGATCGGCCAGTGGCGCTCCGAGGACGAATTGCGCGCGCGCGTGGCCGAGCTGCGCGCCGAGCTG GCGCTCGACGCGCTGCTGTTGACGCGTTCGGAGGAGGGCATGACGCTGTTTTCCGACGCGGGCGAACTCGATGTCGCGGC GCTCGCGCGCGAGGTGTTCGACGTGTCGGGCGCGGGCGATACCGTGATCGCGACCGTGGCCGCGATGCTCGGCGCCGGGG TGTCGCTCGACGAGGCGGTGATGCTCGCGAACCGCGCGGCCGGCATCGTGGTCGGCAAGCTCGGCACGGCCACCGTCGAA TACGACGAACTGTTCCATTGA
Upstream 100 bases:
>100_bases TCGGTGCTGAACGCGCCGGTGATCTTCGACGGCCGCAATCTCTACGAACCCGACGCGATGGCCGAACTCGGGATCGACTA CTACGCCATCGGACGCCCGC
Downstream 100 bases:
>100_bases GCGGCGCCCGGGCGCGCCGCGCGACCCATTCATCCTTCTGACAGCAGGACGATCATGACTCTCATCGTCACCGGCGCGGC CGGCTTCATCGGCGCGAATC
Product: D-glycero-D-manno-heptose 1-phosphate synthase
Products: NA
Alternate protein names: D-beta-D-heptose 7-phosphate kinase; D-beta-D-heptose 7-phosphotransferase; D-beta-D-heptose 1-phosphate adenosyltransferase [H]
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSPLTPPRAAEAAPAVPASVARERLAASRVLVVGDVMLDRYWFGNVNRISPEAPVPVVHVQRQEERLGGAANVARNIVTL GAAAGLLCVVGTDEPGERIVGLLGESGVETHLERDALLPTTIKLRVLAQQQQLLRVDFEAAPQHEVLLAGLARFETLLPS YGVVLMSDYAKGGLTHVTTMIATARAAGLPVLVDPKGADWARYRGASLITPNRAELREVIGQWRSEDELRARVAELRAEL ALDALLLTRSEEGMTLFSDAGELDVAALAREVFDVSGAGDTVIATVAAMLGAGVSLDEAVMLANRAAGIVVGKLGTATVE YDELFH
Sequences:
>Translated_326_residues MSPLTPPRAAEAAPAVPASVARERLAASRVLVVGDVMLDRYWFGNVNRISPEAPVPVVHVQRQEERLGGAANVARNIVTL GAAAGLLCVVGTDEPGERIVGLLGESGVETHLERDALLPTTIKLRVLAQQQQLLRVDFEAAPQHEVLLAGLARFETLLPS YGVVLMSDYAKGGLTHVTTMIATARAAGLPVLVDPKGADWARYRGASLITPNRAELREVIGQWRSEDELRARVAELRAEL ALDALLLTRSEEGMTLFSDAGELDVAALAREVFDVSGAGDTVIATVAAMLGAGVSLDEAVMLANRAAGIVVGKLGTATVE YDELFH >Mature_325_residues SPLTPPRAAEAAPAVPASVARERLAASRVLVVGDVMLDRYWFGNVNRISPEAPVPVVHVQRQEERLGGAANVARNIVTLG AAAGLLCVVGTDEPGERIVGLLGESGVETHLERDALLPTTIKLRVLAQQQQLLRVDFEAAPQHEVLLAGLARFETLLPSY GVVLMSDYAKGGLTHVTTMIATARAAGLPVLVDPKGADWARYRGASLITPNRAELREVIGQWRSEDELRARVAELRAELA LDALLLTRSEEGMTLFSDAGELDVAALAREVFDVSGAGDTVIATVAAMLGAGVSLDEAVMLANRAAGIVVGKLGTATVEY DELFH
Specific function: Catalyzes the ADP transfer to D-glycero-D-manno-heptose 1-phosphate, yielding ADP-D,D-heptose [H]
COG id: COG2870
COG function: function code M; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the cytidylyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789432, Length=303, Percent_Identity=51.1551155115512, Blast_Score=276, Evalue=1e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023030 - InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR011913 - InterPro: IPR011914 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2; PF00294 PfkB [H]
EC number: 2.7.-.- [C]
Molecular weight: Translated: 34577; Mature: 34446
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLTPPRAAEAAPAVPASVARERLAASRVLVVGDVMLDRYWFGNVNRISPEAPVPVVHV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEHHHHHHHHHCCCCCCCCCCCCCCEEEE QRQEERLGGAANVARNIVTLGAAAGLLCVVGTDEPGERIVGLLGESGVETHLERDALLPT CCHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHCCCCCCC TIKLRVLAQQQQLLRVDFEAAPQHEVLLAGLARFETLLPSYGVVLMSDYAKGGLTHVTTM HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH IATARAAGLPVLVDPKGADWARYRGASLITPNRAELREVIGQWRSEDELRARVAELRAEL HHHHHHCCCCEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH ALDALLLTRSEEGMTLFSDAGELDVAALAREVFDVSGAGDTVIATVAAMLGAGVSLDEAV HHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHH MLANRAAGIVVGKLGTATVEYDELFH HHHHCCCCEEEECCCCCEECHHHHCC >Mature Secondary Structure SPLTPPRAAEAAPAVPASVARERLAASRVLVVGDVMLDRYWFGNVNRISPEAPVPVVHV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEHHHHHHHHHCCCCCCCCCCCCCCEEEE QRQEERLGGAANVARNIVTLGAAAGLLCVVGTDEPGERIVGLLGESGVETHLERDALLPT CCHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHCCCCCCC TIKLRVLAQQQQLLRVDFEAAPQHEVLLAGLARFETLLPSYGVVLMSDYAKGGLTHVTTM HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH IATARAAGLPVLVDPKGADWARYRGASLITPNRAELREVIGQWRSEDELRARVAELRAEL HHHHHHCCCCEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH ALDALLLTRSEEGMTLFSDAGELDVAALAREVFDVSGAGDTVIATVAAMLGAGVSLDEAV HHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHH MLANRAAGIVVGKLGTATVEYDELFH HHHHCCCCEEEECCCCCEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA