Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is udg [H]

Identifier: 238026540

GI number: 238026540

Start: 961894

End: 963294

Strand: Direct

Name: udg [H]

Synonym: bglu_1g08840

Alternate gene names: 238026540

Gene position: 961894-963294 (Clockwise)

Preceding gene: 238026539

Following gene: 238026541

Centisome position: 24.62

GC content: 68.31

Gene sequence:

>1401_bases
ATGAAAATCACCATCATCGGCACCGGCTACGTCGGTCTCGTCACCGGCGCCTGCCTGGCGGAGATCGGCCACGACGTGTT
TTGTCTCGACGTCGATCCGCGCAAGATCGAAATCCTCAACAACGGCGGGATTCCGATTCACGAGCCCGGCCTGCAGGAGA
TCATCGCGCGCACGCGCGCGGCCGGGCGCATCACGTTCTCGACCGACGTGGCGGCCAGCGTCGCGCACGGCGAGATCCAG
TTCATCGCGGTCGGCACGCCGCCCGACGAGGACGGCTCCGCCGACCTGCAGTACGTGCTCGAGGCGGCCCGCAACATCGG
CCGCTACATGACCGGCAGCAAGGTGATCGTCGACAAGTCGACGGTGCCGGTCGGCACCGCGCAGCGCGTGCTGGACGTGG
TGGCCGAGGCGCTCGCCGCGCGCGGCCTGGCCGGCAGCGACGCGCACCGCTTCTCGGTCGTCTCGAACCCCGAGTTCCTG
AAGGAAGGCGCGGCCGTCGACGATTTCATGAGACCCGACCGGATCATCATCGGCGTCGACGACGACGAGGCCGGCGCGAT
CGCGCGCGAGAAGATGAAGAAGCTCTACGCGCCGTTCAACCGCAACCACGAGCGCACCATCTACATGGACGTGCGCTCGG
CCGAATTCACTAAATACGCGGCCAATGCGATGCTGGCCACGCGCATCTCGTTCATGAACGAGATGTCGAACCTGGCCGAG
CGCGTGGGCGCCGACATCGAGGCGGTGCGGCGCGGCATCGGTTCCGACCCGCGCATCGGCTATCACTTCCTCTACGCCGG
CGTGGGCTACGGCGGCTCGTGCTTTCCGAAGGACGTGCAGGCGCTGATCCGCACCGCGGCCGAGAACGGCCAGCCGCTGC
GCATCCTCGACGCGGTCGAGGCCGTCAATCACGCGCAGAAGAGCGTGCTGCTCGCGAAGATCGAGGCGCGCTACGGCGCG
GATCTGGCGGGCCGCACGTTCGCGGTCTGGGGCCTGGCGTTCAAGCCCAACACCGACGACATGCGCGAGGCGCCGAGCCG
CACGCTGATCGCCTCGCTGCTCGCGCGCGGCGCCTCGGTGCGCGCCTACGATCCGGTCGCGATCGACGAGGCGCGCCGCG
TGTTCGCGCTGGATCTGGCCGACCAGCCGGCGGCCGCCGCGGGCCTCGTGTTCGTCGCCACCAAGGAGGAGGCGGTGACG
GGCGCCGACGCGCTCGTCGTCGTCACCGAATGGAAGGAATTCAAGAGCCCGGACTTCACGCATCTGAAGTCGGTGCTGAA
CGCGCCGGTGATCTTCGACGGCCGCAATCTCTACGAACCCGACGCGATGGCCGAACTCGGGATCGACTACTACGCCATCG
GACGCCCGCATGTCGCCGCTCACTCCTCCACGCGCGGCTGA

Upstream 100 bases:

>100_bases
GCGCGTCGAGGCCGGCGTGCCGAACTAGGCGCCACGACGCTTCGTCACGAACACCGCGCAGAATCATGCCTAACCTCCGG
AACGAATCACCGGGAAACCT

Downstream 100 bases:

>100_bases
GGCCGCGCCCGCCGTGCCCGCGTCCGTCGCGCGCGAGCGCCTCGCCGCCTCGCGCGTGCTGGTGGTCGGCGACGTGATGC
TGGACCGCTACTGGTTCGGC

Product: UDP-glucose 6-dehydrogenase

Products: NA

Alternate protein names: UDP-Glc dehydrogenase; UDP-GlcDH; UDPGDH [H]

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIEILNNGGIPIHEPGLQEIIARTRAAGRITFSTDVAASVAHGEIQ
FIAVGTPPDEDGSADLQYVLEAARNIGRYMTGSKVIVDKSTVPVGTAQRVLDVVAEALAARGLAGSDAHRFSVVSNPEFL
KEGAAVDDFMRPDRIIIGVDDDEAGAIAREKMKKLYAPFNRNHERTIYMDVRSAEFTKYAANAMLATRISFMNEMSNLAE
RVGADIEAVRRGIGSDPRIGYHFLYAGVGYGGSCFPKDVQALIRTAAENGQPLRILDAVEAVNHAQKSVLLAKIEARYGA
DLAGRTFAVWGLAFKPNTDDMREAPSRTLIASLLARGASVRAYDPVAIDEARRVFALDLADQPAAAAGLVFVATKEEAVT
GADALVVVTEWKEFKSPDFTHLKSVLNAPVIFDGRNLYEPDAMAELGIDYYAIGRPHVAAHSSTRG

Sequences:

>Translated_466_residues
MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIEILNNGGIPIHEPGLQEIIARTRAAGRITFSTDVAASVAHGEIQ
FIAVGTPPDEDGSADLQYVLEAARNIGRYMTGSKVIVDKSTVPVGTAQRVLDVVAEALAARGLAGSDAHRFSVVSNPEFL
KEGAAVDDFMRPDRIIIGVDDDEAGAIAREKMKKLYAPFNRNHERTIYMDVRSAEFTKYAANAMLATRISFMNEMSNLAE
RVGADIEAVRRGIGSDPRIGYHFLYAGVGYGGSCFPKDVQALIRTAAENGQPLRILDAVEAVNHAQKSVLLAKIEARYGA
DLAGRTFAVWGLAFKPNTDDMREAPSRTLIASLLARGASVRAYDPVAIDEARRVFALDLADQPAAAAGLVFVATKEEAVT
GADALVVVTEWKEFKSPDFTHLKSVLNAPVIFDGRNLYEPDAMAELGIDYYAIGRPHVAAHSSTRG
>Mature_466_residues
MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIEILNNGGIPIHEPGLQEIIARTRAAGRITFSTDVAASVAHGEIQ
FIAVGTPPDEDGSADLQYVLEAARNIGRYMTGSKVIVDKSTVPVGTAQRVLDVVAEALAARGLAGSDAHRFSVVSNPEFL
KEGAAVDDFMRPDRIIIGVDDDEAGAIAREKMKKLYAPFNRNHERTIYMDVRSAEFTKYAANAMLATRISFMNEMSNLAE
RVGADIEAVRRGIGSDPRIGYHFLYAGVGYGGSCFPKDVQALIRTAAENGQPLRILDAVEAVNHAQKSVLLAKIEARYGA
DLAGRTFAVWGLAFKPNTDDMREAPSRTLIASLLARGASVRAYDPVAIDEARRVFALDLADQPAAAAGLVFVATKEEAVT
GADALVVVTEWKEFKSPDFTHLKSVLNAPVIFDGRNLYEPDAMAELGIDYYAIGRPHVAAHSSTRG

Specific function: Unknown

COG id: COG1004

COG function: function code M; Predicted UDP-glucose 6-dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507813, Length=471, Percent_Identity=34.1825902335456, Blast_Score=235, Evalue=7e-62,
Organism=Homo sapiens, GI296040438, Length=373, Percent_Identity=34.5844504021448, Blast_Score=187, Evalue=3e-47,
Organism=Homo sapiens, GI296040443, Length=314, Percent_Identity=35.6687898089172, Blast_Score=169, Evalue=8e-42,
Organism=Escherichia coli, GI1788340, Length=381, Percent_Identity=28.8713910761155, Blast_Score=154, Evalue=2e-38,
Organism=Escherichia coli, GI48994968, Length=438, Percent_Identity=27.3972602739726, Blast_Score=142, Evalue=6e-35,
Organism=Caenorhabditis elegans, GI17560350, Length=472, Percent_Identity=35.3813559322034, Blast_Score=251, Evalue=8e-67,
Organism=Drosophila melanogaster, GI17136908, Length=471, Percent_Identity=34.1825902335456, Blast_Score=251, Evalue=1e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR021157
- InterPro:   IPR016040
- InterPro:   IPR017476
- InterPro:   IPR014027
- InterPro:   IPR014026
- InterPro:   IPR014028
- InterPro:   IPR001732 [H]

Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]

EC number: =1.1.1.22 [H]

Molecular weight: Translated: 50132; Mature: 50132

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIEILNNGGIPIHEPGLQEIIARTRA
CEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHC
AGRITFSTDVAASVAHGEIQFIAVGTPPDEDGSADLQYVLEAARNIGRYMTGSKVIVDKS
CCEEEEECCHHHHEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECC
TVPVGTAQRVLDVVAEALAARGLAGSDAHRFSVVSNPEFLKEGAAVDDFMRPDRIIIGVD
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHCCCCHHHHCCCCEEEEEEC
DDEAGAIAREKMKKLYAPFNRNHERTIYMDVRSAEFTKYAANAMLATRISFMNEMSNLAE
CCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RVGADIEAVRRGIGSDPRIGYHFLYAGVGYGGSCFPKDVQALIRTAAENGQPLRILDAVE
HHCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
AVNHAQKSVLLAKIEARYGADLAGRTFAVWGLAFKPNTDDMREAPSRTLIASLLARGASV
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHCCHHHHHHHHHHCCCCC
RAYDPVAIDEARRVFALDLADQPAAAAGLVFVATKEEAVTGADALVVVTEWKEFKSPDFT
EECCCCCHHCCCEEEEEECCCCCCCCCCEEEEEECCHHCCCCCEEEEEEEHHHCCCCCHH
HLKSVLNAPVIFDGRNLYEPDAMAELGIDYYAIGRPHVAAHSSTRG
HHHHHHCCCEEECCCCCCCCHHHHHHCCCEEECCCCCEECCCCCCC
>Mature Secondary Structure
MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIEILNNGGIPIHEPGLQEIIARTRA
CEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHC
AGRITFSTDVAASVAHGEIQFIAVGTPPDEDGSADLQYVLEAARNIGRYMTGSKVIVDKS
CCEEEEECCHHHHEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECC
TVPVGTAQRVLDVVAEALAARGLAGSDAHRFSVVSNPEFLKEGAAVDDFMRPDRIIIGVD
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHCCCCHHHHCCCCEEEEEEC
DDEAGAIAREKMKKLYAPFNRNHERTIYMDVRSAEFTKYAANAMLATRISFMNEMSNLAE
CCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RVGADIEAVRRGIGSDPRIGYHFLYAGVGYGGSCFPKDVQALIRTAAENGQPLRILDAVE
HHCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
AVNHAQKSVLLAKIEARYGADLAGRTFAVWGLAFKPNTDDMREAPSRTLIASLLARGASV
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHCCHHHHHHHHHHCCCCC
RAYDPVAIDEARRVFALDLADQPAAAAGLVFVATKEEAVTGADALVVVTEWKEFKSPDFT
EECCCCCHHCCCEEEEEECCCCCCCCCCEEEEEECCHHCCCCCEEEEEEEHHHCCCCCHH
HLKSVLNAPVIFDGRNLYEPDAMAELGIDYYAIGRPHVAAHSSTRG
HHHHHHCCCEEECCCCCCCCHHHHHHCCCEEECCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]