| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is udg [H]
Identifier: 238026540
GI number: 238026540
Start: 961894
End: 963294
Strand: Direct
Name: udg [H]
Synonym: bglu_1g08840
Alternate gene names: 238026540
Gene position: 961894-963294 (Clockwise)
Preceding gene: 238026539
Following gene: 238026541
Centisome position: 24.62
GC content: 68.31
Gene sequence:
>1401_bases ATGAAAATCACCATCATCGGCACCGGCTACGTCGGTCTCGTCACCGGCGCCTGCCTGGCGGAGATCGGCCACGACGTGTT TTGTCTCGACGTCGATCCGCGCAAGATCGAAATCCTCAACAACGGCGGGATTCCGATTCACGAGCCCGGCCTGCAGGAGA TCATCGCGCGCACGCGCGCGGCCGGGCGCATCACGTTCTCGACCGACGTGGCGGCCAGCGTCGCGCACGGCGAGATCCAG TTCATCGCGGTCGGCACGCCGCCCGACGAGGACGGCTCCGCCGACCTGCAGTACGTGCTCGAGGCGGCCCGCAACATCGG CCGCTACATGACCGGCAGCAAGGTGATCGTCGACAAGTCGACGGTGCCGGTCGGCACCGCGCAGCGCGTGCTGGACGTGG TGGCCGAGGCGCTCGCCGCGCGCGGCCTGGCCGGCAGCGACGCGCACCGCTTCTCGGTCGTCTCGAACCCCGAGTTCCTG AAGGAAGGCGCGGCCGTCGACGATTTCATGAGACCCGACCGGATCATCATCGGCGTCGACGACGACGAGGCCGGCGCGAT CGCGCGCGAGAAGATGAAGAAGCTCTACGCGCCGTTCAACCGCAACCACGAGCGCACCATCTACATGGACGTGCGCTCGG CCGAATTCACTAAATACGCGGCCAATGCGATGCTGGCCACGCGCATCTCGTTCATGAACGAGATGTCGAACCTGGCCGAG CGCGTGGGCGCCGACATCGAGGCGGTGCGGCGCGGCATCGGTTCCGACCCGCGCATCGGCTATCACTTCCTCTACGCCGG CGTGGGCTACGGCGGCTCGTGCTTTCCGAAGGACGTGCAGGCGCTGATCCGCACCGCGGCCGAGAACGGCCAGCCGCTGC GCATCCTCGACGCGGTCGAGGCCGTCAATCACGCGCAGAAGAGCGTGCTGCTCGCGAAGATCGAGGCGCGCTACGGCGCG GATCTGGCGGGCCGCACGTTCGCGGTCTGGGGCCTGGCGTTCAAGCCCAACACCGACGACATGCGCGAGGCGCCGAGCCG CACGCTGATCGCCTCGCTGCTCGCGCGCGGCGCCTCGGTGCGCGCCTACGATCCGGTCGCGATCGACGAGGCGCGCCGCG TGTTCGCGCTGGATCTGGCCGACCAGCCGGCGGCCGCCGCGGGCCTCGTGTTCGTCGCCACCAAGGAGGAGGCGGTGACG GGCGCCGACGCGCTCGTCGTCGTCACCGAATGGAAGGAATTCAAGAGCCCGGACTTCACGCATCTGAAGTCGGTGCTGAA CGCGCCGGTGATCTTCGACGGCCGCAATCTCTACGAACCCGACGCGATGGCCGAACTCGGGATCGACTACTACGCCATCG GACGCCCGCATGTCGCCGCTCACTCCTCCACGCGCGGCTGA
Upstream 100 bases:
>100_bases GCGCGTCGAGGCCGGCGTGCCGAACTAGGCGCCACGACGCTTCGTCACGAACACCGCGCAGAATCATGCCTAACCTCCGG AACGAATCACCGGGAAACCT
Downstream 100 bases:
>100_bases GGCCGCGCCCGCCGTGCCCGCGTCCGTCGCGCGCGAGCGCCTCGCCGCCTCGCGCGTGCTGGTGGTCGGCGACGTGATGC TGGACCGCTACTGGTTCGGC
Product: UDP-glucose 6-dehydrogenase
Products: NA
Alternate protein names: UDP-Glc dehydrogenase; UDP-GlcDH; UDPGDH [H]
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIEILNNGGIPIHEPGLQEIIARTRAAGRITFSTDVAASVAHGEIQ FIAVGTPPDEDGSADLQYVLEAARNIGRYMTGSKVIVDKSTVPVGTAQRVLDVVAEALAARGLAGSDAHRFSVVSNPEFL KEGAAVDDFMRPDRIIIGVDDDEAGAIAREKMKKLYAPFNRNHERTIYMDVRSAEFTKYAANAMLATRISFMNEMSNLAE RVGADIEAVRRGIGSDPRIGYHFLYAGVGYGGSCFPKDVQALIRTAAENGQPLRILDAVEAVNHAQKSVLLAKIEARYGA DLAGRTFAVWGLAFKPNTDDMREAPSRTLIASLLARGASVRAYDPVAIDEARRVFALDLADQPAAAAGLVFVATKEEAVT GADALVVVTEWKEFKSPDFTHLKSVLNAPVIFDGRNLYEPDAMAELGIDYYAIGRPHVAAHSSTRG
Sequences:
>Translated_466_residues MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIEILNNGGIPIHEPGLQEIIARTRAAGRITFSTDVAASVAHGEIQ FIAVGTPPDEDGSADLQYVLEAARNIGRYMTGSKVIVDKSTVPVGTAQRVLDVVAEALAARGLAGSDAHRFSVVSNPEFL KEGAAVDDFMRPDRIIIGVDDDEAGAIAREKMKKLYAPFNRNHERTIYMDVRSAEFTKYAANAMLATRISFMNEMSNLAE RVGADIEAVRRGIGSDPRIGYHFLYAGVGYGGSCFPKDVQALIRTAAENGQPLRILDAVEAVNHAQKSVLLAKIEARYGA DLAGRTFAVWGLAFKPNTDDMREAPSRTLIASLLARGASVRAYDPVAIDEARRVFALDLADQPAAAAGLVFVATKEEAVT GADALVVVTEWKEFKSPDFTHLKSVLNAPVIFDGRNLYEPDAMAELGIDYYAIGRPHVAAHSSTRG >Mature_466_residues MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIEILNNGGIPIHEPGLQEIIARTRAAGRITFSTDVAASVAHGEIQ FIAVGTPPDEDGSADLQYVLEAARNIGRYMTGSKVIVDKSTVPVGTAQRVLDVVAEALAARGLAGSDAHRFSVVSNPEFL KEGAAVDDFMRPDRIIIGVDDDEAGAIAREKMKKLYAPFNRNHERTIYMDVRSAEFTKYAANAMLATRISFMNEMSNLAE RVGADIEAVRRGIGSDPRIGYHFLYAGVGYGGSCFPKDVQALIRTAAENGQPLRILDAVEAVNHAQKSVLLAKIEARYGA DLAGRTFAVWGLAFKPNTDDMREAPSRTLIASLLARGASVRAYDPVAIDEARRVFALDLADQPAAAAGLVFVATKEEAVT GADALVVVTEWKEFKSPDFTHLKSVLNAPVIFDGRNLYEPDAMAELGIDYYAIGRPHVAAHSSTRG
Specific function: Unknown
COG id: COG1004
COG function: function code M; Predicted UDP-glucose 6-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=471, Percent_Identity=34.1825902335456, Blast_Score=235, Evalue=7e-62, Organism=Homo sapiens, GI296040438, Length=373, Percent_Identity=34.5844504021448, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI296040443, Length=314, Percent_Identity=35.6687898089172, Blast_Score=169, Evalue=8e-42, Organism=Escherichia coli, GI1788340, Length=381, Percent_Identity=28.8713910761155, Blast_Score=154, Evalue=2e-38, Organism=Escherichia coli, GI48994968, Length=438, Percent_Identity=27.3972602739726, Blast_Score=142, Evalue=6e-35, Organism=Caenorhabditis elegans, GI17560350, Length=472, Percent_Identity=35.3813559322034, Blast_Score=251, Evalue=8e-67, Organism=Drosophila melanogaster, GI17136908, Length=471, Percent_Identity=34.1825902335456, Blast_Score=251, Evalue=1e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR021157 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: =1.1.1.22 [H]
Molecular weight: Translated: 50132; Mature: 50132
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIEILNNGGIPIHEPGLQEIIARTRA CEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHC AGRITFSTDVAASVAHGEIQFIAVGTPPDEDGSADLQYVLEAARNIGRYMTGSKVIVDKS CCEEEEECCHHHHEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECC TVPVGTAQRVLDVVAEALAARGLAGSDAHRFSVVSNPEFLKEGAAVDDFMRPDRIIIGVD CCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHCCCCHHHHCCCCEEEEEEC DDEAGAIAREKMKKLYAPFNRNHERTIYMDVRSAEFTKYAANAMLATRISFMNEMSNLAE CCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH RVGADIEAVRRGIGSDPRIGYHFLYAGVGYGGSCFPKDVQALIRTAAENGQPLRILDAVE HHCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH AVNHAQKSVLLAKIEARYGADLAGRTFAVWGLAFKPNTDDMREAPSRTLIASLLARGASV HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHCCHHHHHHHHHHCCCCC RAYDPVAIDEARRVFALDLADQPAAAAGLVFVATKEEAVTGADALVVVTEWKEFKSPDFT EECCCCCHHCCCEEEEEECCCCCCCCCCEEEEEECCHHCCCCCEEEEEEEHHHCCCCCHH HLKSVLNAPVIFDGRNLYEPDAMAELGIDYYAIGRPHVAAHSSTRG HHHHHHCCCEEECCCCCCCCHHHHHHCCCEEECCCCCEECCCCCCC >Mature Secondary Structure MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIEILNNGGIPIHEPGLQEIIARTRA CEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHC AGRITFSTDVAASVAHGEIQFIAVGTPPDEDGSADLQYVLEAARNIGRYMTGSKVIVDKS CCEEEEECCHHHHEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECC TVPVGTAQRVLDVVAEALAARGLAGSDAHRFSVVSNPEFLKEGAAVDDFMRPDRIIIGVD CCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHCCCCHHHHCCCCEEEEEEC DDEAGAIAREKMKKLYAPFNRNHERTIYMDVRSAEFTKYAANAMLATRISFMNEMSNLAE CCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH RVGADIEAVRRGIGSDPRIGYHFLYAGVGYGGSCFPKDVQALIRTAAENGQPLRILDAVE HHCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH AVNHAQKSVLLAKIEARYGADLAGRTFAVWGLAFKPNTDDMREAPSRTLIASLLARGASV HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHCCHHHHHHHHHHCCCCC RAYDPVAIDEARRVFALDLADQPAAAAGLVFVATKEEAVTGADALVVVTEWKEFKSPDFT EECCCCCHHCCCEEEEEECCCCCCCCCCEEEEEECCHHCCCCCEEEEEEEHHHCCCCCHH HLKSVLNAPVIFDGRNLYEPDAMAELGIDYYAIGRPHVAAHSSTRG HHHHHHCCCEEECCCCCCCCHHHHHHCCCEEECCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]