| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is nuoE2 [H]
Identifier: 238026516
GI number: 238026516
Start: 935066
End: 935554
Strand: Reverse
Name: nuoE2 [H]
Synonym: bglu_1g08600
Alternate gene names: 238026516
Gene position: 935554-935066 (Counterclockwise)
Preceding gene: 238026519
Following gene: 238026515
Centisome position: 23.95
GC content: 70.55
Gene sequence:
>489_bases ATGTCCCCATCCCCCGTTTCAGCGGACGCGCTCGTCTCGCGGCATGTACGCGCCGGCCGATCGCTCGTGGCAATTCTGCA CGCCATTCAGGATGAAGCCGGCTACGTGCCCGAGGGCTGCGTGCCGCCGCTCGCGAAAGCGCTGAACCTGTCACGCGCCG AAGTGCATGGCGTGCTCACCTACTACCACCATTTCCGGACCACGCCGCCCGCGCGCGTGACGATCCAGCTGTGCCGCGCC GAAGCCTGCCGCAGCCTCGGCGGCGAGGCGCTGGTCGAGCACGCGCAGGCGCGCACCGGCTGCCGAATCGACGCCGGGCA CAACGGCGACGTCGCGCTCGAATCGGTGTACTGCCTCGGCTTCTGCGCGCAGTCGCCATCCGCGATGATCAACGGCGAGC CGCATGCGCGCCTGAGCCCGGCGCGCTTCGACGCGCTGCTCGCCGCAGCCGTGGCCGACACCGCCGCCGACCTGAAGGAG CCCGTATGA
Upstream 100 bases:
>100_bases CTGGATTCTAACGGCTTATCGTCTTCTGCACTCGATCAAACAACAGCGTCGATGCCGGGATATATGAAACCCCGAGCATA TAGACCTGGAGGAGCTCAGG
Downstream 100 bases:
>100_bases GCCAGTCCGCCGTCCGCATCCATGTGCCACGCGACTCGGCCGCGCTGGCGGTCGGCGCCGAGGCGCTGGCCCGCGCGATC ACGGCCGAAGCCGCCGCGCG
Product: formate dehydrogenase subunit gamma
Products: NA
Alternate protein names: NADH dehydrogenase I subunit E 2; NDH-1 subunit E 2 [H]
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSPSPVSADALVSRHVRAGRSLVAILHAIQDEAGYVPEGCVPPLAKALNLSRAEVHGVLTYYHHFRTTPPARVTIQLCRA EACRSLGGEALVEHAQARTGCRIDAGHNGDVALESVYCLGFCAQSPSAMINGEPHARLSPARFDALLAAAVADTAADLKE PV
Sequences:
>Translated_162_residues MSPSPVSADALVSRHVRAGRSLVAILHAIQDEAGYVPEGCVPPLAKALNLSRAEVHGVLTYYHHFRTTPPARVTIQLCRA EACRSLGGEALVEHAQARTGCRIDAGHNGDVALESVYCLGFCAQSPSAMINGEPHARLSPARFDALLAAAVADTAADLKE PV >Mature_161_residues SPSPVSADALVSRHVRAGRSLVAILHAIQDEAGYVPEGCVPPLAKALNLSRAEVHGVLTYYHHFRTTPPARVTIQLCRAE ACRSLGGEALVEHAQARTGCRIDAGHNGDVALESVYCLGFCAQSPSAMINGEPHARLSPARFDALLAAAVADTAADLKEP V
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1905
COG function: function code C; NADH:ubiquinone oxidoreductase 24 kD subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I 24 kDa subunit family [H]
Homologues:
Organism=Escherichia coli, GI1788621, Length=128, Percent_Identity=28.90625, Blast_Score=61, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002023 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01257 Complex1_24kDa [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 17059; Mature: 16927
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSPVSADALVSRHVRAGRSLVAILHAIQDEAGYVPEGCVPPLAKALNLSRAEVHGVLT CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHH YYHHFRTTPPARVTIQLCRAEACRSLGGEALVEHAQARTGCRIDAGHNGDVALESVYCLG HHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHH FCAQSPSAMINGEPHARLSPARFDALLAAAVADTAADLKEPV HHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SPSPVSADALVSRHVRAGRSLVAILHAIQDEAGYVPEGCVPPLAKALNLSRAEVHGVLT CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHH YYHHFRTTPPARVTIQLCRAEACRSLGGEALVEHAQARTGCRIDAGHNGDVALESVYCLG HHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHH FCAQSPSAMINGEPHARLSPARFDALLAAAVADTAADLKEPV HHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481432 [H]