| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is mauR [H]
Identifier: 238026519
GI number: 238026519
Start: 937378
End: 938262
Strand: Reverse
Name: mauR [H]
Synonym: bglu_1g08630
Alternate gene names: 238026519
Gene position: 938262-937378 (Counterclockwise)
Preceding gene: 238026521
Following gene: 238026516
Centisome position: 24.02
GC content: 72.43
Gene sequence:
>885_bases ATGACTGATCAAATTCGCACAGTTCTCGACTGGGAGGACCTGCGCGTATTCGTGGCGCTGGCACGGCACGGCAGCCTGTC GGCGGCGGCCCGAGCGCTGTCGGTCTCGCACGCCACGATCTCGCGGCGAATCCAGTCGCTCGAACACGCGCTCGGCGAGC GGCTGGTCGAGCGCCGTCCCGACGGCTACGTGCTGACGCCGGCCGGCACCCGCGCGCTGGCAGGCGCGAGCGAGATGGAA ACGGCGGCCGAACGGCTGAGCCGCGGCGGCCGCGACGACAGCCCACGCGGTCTGGTCAGGCTCAACGCGCCGCCCAGCCT GGTGCAGCACTTCCTGATCGCGCGGCTCGCGACGCTTGTCGCGCGGCATCCGTCGCTCGACATCGACGTGGCGTCGGACT TCCGCGCGGTCAGCCTGGATCGCCGCGAGGCCGACATCGCGCTACGCTTCGGGCGCCCCGGCGACGGTGACGTGATCGCG AAATCGGTGGCGACGCCGGGCTACGGGTTCTACGCGACGCCGCAATGGGCCAGCCGGCTCGCGGCGGGCGAGGCGCCGGT GTTCGTCGGCTTCGACGAGGCCAACGCGCATCTGCCCGAAGCGGTCTGGCTCGCGCGGCATTTTCCGCAGGCGCGGGTTG CCATCCGCGGCGGCAGCCAGCTCGCGCAGGCCGCTGCCGCGCGGGCCGGCGCCGGCGTCGCGCTGCTGCTGAACTTCATC GGCCGCTGCGACGCGGCACTCGTGCCCTGCGCGCTCGGCCAGACGCCGCCGCCCCGGGAACTGTGGCTGCTGACGCGGCG CGACGGCCGCAAGGACCTGCCGACACGGACCGTCGTCGATTTCCTCGTTCAGGCCTTCGCCGACGAACACGATCATCTGG CGTGA
Upstream 100 bases:
>100_bases AGGCAGAGGTTCGAAATCGTCATCGCAATGTTCCGGTTGGCTATCGAGGACCTCATGCTAGGCTGCACGGCAATGTTCGA AAATTCCCCAATTTCACACA
Downstream 100 bases:
>100_bases ACCGGCCGCGGGATCGCTATGGCGGAATCAGGCGGCAGGCGTGCCGCACGCGGGAGACGCGAGCCGGTGGAGGGAGCCTC GGCGCCATGAGGGCAAGACA
Product: LysR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MTDQIRTVLDWEDLRVFVALARHGSLSAAARALSVSHATISRRIQSLEHALGERLVERRPDGYVLTPAGTRALAGASEME TAAERLSRGGRDDSPRGLVRLNAPPSLVQHFLIARLATLVARHPSLDIDVASDFRAVSLDRREADIALRFGRPGDGDVIA KSVATPGYGFYATPQWASRLAAGEAPVFVGFDEANAHLPEAVWLARHFPQARVAIRGGSQLAQAAAARAGAGVALLLNFI GRCDAALVPCALGQTPPPRELWLLTRRDGRKDLPTRTVVDFLVQAFADEHDHLA
Sequences:
>Translated_294_residues MTDQIRTVLDWEDLRVFVALARHGSLSAAARALSVSHATISRRIQSLEHALGERLVERRPDGYVLTPAGTRALAGASEME TAAERLSRGGRDDSPRGLVRLNAPPSLVQHFLIARLATLVARHPSLDIDVASDFRAVSLDRREADIALRFGRPGDGDVIA KSVATPGYGFYATPQWASRLAAGEAPVFVGFDEANAHLPEAVWLARHFPQARVAIRGGSQLAQAAAARAGAGVALLLNFI GRCDAALVPCALGQTPPPRELWLLTRRDGRKDLPTRTVVDFLVQAFADEHDHLA >Mature_293_residues TDQIRTVLDWEDLRVFVALARHGSLSAAARALSVSHATISRRIQSLEHALGERLVERRPDGYVLTPAGTRALAGASEMET AAERLSRGGRDDSPRGLVRLNAPPSLVQHFLIARLATLVARHPSLDIDVASDFRAVSLDRREADIALRFGRPGDGDVIAK SVATPGYGFYATPQWASRLAAGEAPVFVGFDEANAHLPEAVWLARHFPQARVAIRGGSQLAQAAAARAGAGVALLLNFIG RCDAALVPCALGQTPPPRELWLLTRRDGRKDLPTRTVVDFLVQAFADEHDHLA
Specific function: Transcriptional activator of the mau genes involved in methylamine metabolism [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1786401, Length=190, Percent_Identity=28.4210526315789, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI1789173, Length=278, Percent_Identity=26.6187050359712, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI145693193, Length=186, Percent_Identity=26.3440860215054, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1786448, Length=235, Percent_Identity=25.531914893617, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000847 - InterPro: IPR005119 - InterPro: IPR011991 [H]
Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]
EC number: NA
Molecular weight: Translated: 31717; Mature: 31586
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: PS50931 HTH_LYSR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQIRTVLDWEDLRVFVALARHGSLSAAARALSVSHATISRRIQSLEHALGERLVERRP CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DGYVLTPAGTRALAGASEMETAAERLSRGGRDDSPRGLVRLNAPPSLVQHFLIARLATLV CCEEECCCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHH ARHPSLDIDVASDFRAVSLDRREADIALRFGRPGDGDVIAKSVATPGYGFYATPQWASRL HCCCCCCEEECCCCEEEECCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHH AAGEAPVFVGFDEANAHLPEAVWLARHFPQARVAIRGGSQLAQAAAARAGAGVALLLNFI HCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHH GRCDAALVPCALGQTPPPRELWLLTRRDGRKDLPTRTVVDFLVQAFADEHDHLA HCCCHHHHHHHCCCCCCCHHEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TDQIRTVLDWEDLRVFVALARHGSLSAAARALSVSHATISRRIQSLEHALGERLVERRP CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DGYVLTPAGTRALAGASEMETAAERLSRGGRDDSPRGLVRLNAPPSLVQHFLIARLATLV CCEEECCCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHH ARHPSLDIDVASDFRAVSLDRREADIALRFGRPGDGDVIAKSVATPGYGFYATPQWASRL HCCCCCCEEECCCCEEEECCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHH AAGEAPVFVGFDEANAHLPEAVWLARHFPQARVAIRGGSQLAQAAAARAGAGVALLLNFI HCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHH GRCDAALVPCALGQTPPPRELWLLTRRDGRKDLPTRTVVDFLVQAFADEHDHLA HCCCHHHHHHHCCCCCCCHHEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7957249 [H]