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The map label for this gene is oxdD [H]

Identifier: 238026454

GI number: 238026454

Start: 855330

End: 856586

Strand: Direct

Name: oxdD [H]

Synonym: bglu_1g07960

Alternate gene names: 238026454

Gene position: 855330-856586 (Clockwise)

Preceding gene: 238026448

Following gene: 238026455

Centisome position: 21.9

GC content: 69.05

Gene sequence:

>1257_bases
ATGACCGATTTGAAACGTCGTAGCGTGCTGGTCGGCGCGGCCGCGGGCGCCGTGGCGCTGGGGGCGGCGGCCGCCGCGAA
GGCGGCCGAGTTCGGCAATCCCGACATGCCGGCGCAGGGCGCCATCAACTCGACGCCGATCGCGATTTCCGATCCGGGGC
CGCAGAGCCCGCAGCTGCGCGGCGCGCTGCCGTCGTTCAGCAATCCGCCCGCCACCGACGTCGGCGGCATGCCGATCCCG
TGGGCCTCGTTCAATCTCGCGCACAAGCGCATCCAGGCAGGCGGCTGGGCACGCGAGGTGACCACCAAGGCGTTCCCGGT
GTCGAAGGACATCGCCGGCGTGAACATGCGGCTCGGGCCGGGCGGCGTGCGCGAGCTGCACTGGCACCAGCAGGCGGAGT
GGGCGATCATGGTGAGCGGCCAGGTGCGCATCACCACCATCGATACCAAGGGCCGCGCCGAGGTGGCCGACGTGCAGAGC
GGCGATATCTGGTATTTCCCGCCGGGCCTGCCGCATTCGCTGCAGGGGCTGGGCGACAACGGCGGCGAATTCGTGCTGGC
GTTCGACAACGGCGCGGCCGGTGAATTCAACACGCTGATGCTGTCCGACTGGCTCGCGCATACGCCGCCCGAGATCCTGG
CGCAGAACTTCGGCGTGCCGGCCGAGAAGTTCAAGGAGATTCCGCTCGAGCAGCTGTGGATCTACCAGGGCGCCAAGGCC
GGCCCGCTCGCCGCCGACCAGGCCTACGCGGCCTCGCCGGACGGTCGCCCCGATCATCCGTTCGTGTTCCGCATGAGCGC
GATGGCGCCGACCCGCTCGACCGCGGGCGGCGAGGTGCGGATCGTCGACAGCCACAACTTCCCGGTCTCGAGGACGGTGG
CCGCCGCGCTCGTGACGGTCAAGCCGGGCGGCCTGCGCGAGCTGCACTGGCACCCGGACAACGACGAATGGCAGTACTTC
ATCAAGGGCACCGGCCGCATGACGGTGTTCAACACCGGGCCTGCCGCGCAGACCGTCGATTTCAGCCCCGGCGACGTCGG
CTACGTCGAGAAGAACCTGGGCCACTACATCAAGAACACCGGCAAGGAGGACCTGATGTTCCTCGAGATCTTCAAGTCGG
ATCACTTCGCGGAGGTCACGCTCTCGCAGTGGCTGGCCGGCGTGCCGCGCCAGTTGCTGCGCGAGCATCTGCGCGTGGAC
GACGAGACGCTCGACGCGATCCACGACCTGAAGCGCCGCCGCGACGTGATCGCCTGA

Upstream 100 bases:

>100_bases
CCGGCACCGCGCCCCGCCGCTTGCGCCGGCGTTCCGCGCCGCGTGCCGGAGCGGCGCGGCGGCCGGAGCCATCGAAACGC
TATATTCAGGAGAGCAGAGC

Downstream 100 bases:

>100_bases
GCGCGAACCCGCCGCACGGCGCGCCACCGCATTCGAGGCTGCCGCGCGGCGGATTCGGAATCCCTTGTCGAGACCCGGCC
ATGCCGGGAAGAGGCCCTCA

Product: Cupin family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MTDLKRRSVLVGAAAGAVALGAAAAAKAAEFGNPDMPAQGAINSTPIAISDPGPQSPQLRGALPSFSNPPATDVGGMPIP
WASFNLAHKRIQAGGWAREVTTKAFPVSKDIAGVNMRLGPGGVRELHWHQQAEWAIMVSGQVRITTIDTKGRAEVADVQS
GDIWYFPPGLPHSLQGLGDNGGEFVLAFDNGAAGEFNTLMLSDWLAHTPPEILAQNFGVPAEKFKEIPLEQLWIYQGAKA
GPLAADQAYAASPDGRPDHPFVFRMSAMAPTRSTAGGEVRIVDSHNFPVSRTVAAALVTVKPGGLRELHWHPDNDEWQYF
IKGTGRMTVFNTGPAAQTVDFSPGDVGYVEKNLGHYIKNTGKEDLMFLEIFKSDHFAEVTLSQWLAGVPRQLLREHLRVD
DETLDAIHDLKRRRDVIA

Sequences:

>Translated_418_residues
MTDLKRRSVLVGAAAGAVALGAAAAAKAAEFGNPDMPAQGAINSTPIAISDPGPQSPQLRGALPSFSNPPATDVGGMPIP
WASFNLAHKRIQAGGWAREVTTKAFPVSKDIAGVNMRLGPGGVRELHWHQQAEWAIMVSGQVRITTIDTKGRAEVADVQS
GDIWYFPPGLPHSLQGLGDNGGEFVLAFDNGAAGEFNTLMLSDWLAHTPPEILAQNFGVPAEKFKEIPLEQLWIYQGAKA
GPLAADQAYAASPDGRPDHPFVFRMSAMAPTRSTAGGEVRIVDSHNFPVSRTVAAALVTVKPGGLRELHWHPDNDEWQYF
IKGTGRMTVFNTGPAAQTVDFSPGDVGYVEKNLGHYIKNTGKEDLMFLEIFKSDHFAEVTLSQWLAGVPRQLLREHLRVD
DETLDAIHDLKRRRDVIA
>Mature_417_residues
TDLKRRSVLVGAAAGAVALGAAAAAKAAEFGNPDMPAQGAINSTPIAISDPGPQSPQLRGALPSFSNPPATDVGGMPIPW
ASFNLAHKRIQAGGWAREVTTKAFPVSKDIAGVNMRLGPGGVRELHWHQQAEWAIMVSGQVRITTIDTKGRAEVADVQSG
DIWYFPPGLPHSLQGLGDNGGEFVLAFDNGAAGEFNTLMLSDWLAHTPPEILAQNFGVPAEKFKEIPLEQLWIYQGAKAG
PLAADQAYAASPDGRPDHPFVFRMSAMAPTRSTAGGEVRIVDSHNFPVSRTVAAALVTVKPGGLRELHWHPDNDEWQYFI
KGTGRMTVFNTGPAAQTVDFSPGDVGYVEKNLGHYIKNTGKEDLMFLEIFKSDHFAEVTLSQWLAGVPRQLLREHLRVDD
ETLDAIHDLKRRRDVIA

Specific function: Converts oxalate to formate and CO(2) [H]

COG id: COG2140

COG function: function code GR; Thermophilic glucose-6-phosphate isomerase and related metalloenzymes

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis oxdC [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017774
- InterPro:   IPR006045
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00190 Cupin_1 [H]

EC number: =4.1.1.2 [H]

Molecular weight: Translated: 45144; Mature: 45013

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLKRRSVLVGAAAGAVALGAAAAAKAAEFGNPDMPAQGAINSTPIAISDPGPQSPQLR
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
GALPSFSNPPATDVGGMPIPWASFNLAHKRIQAGGWAREVTTKAFPVSKDIAGVNMRLGP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEEECC
GGVRELHWHQQAEWAIMVSGQVRITTIDTKGRAEVADVQSGDIWYFPPGLPHSLQGLGDN
CCCHHHHHCCCCCEEEEEECEEEEEEECCCCCCEEEECCCCCEEEECCCCCHHHHCCCCC
GGEFVLAFDNGAAGEFNTLMLSDWLAHTPPEILAQNFGVPAEKFKEIPLEQLWIYQGAKA
CCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHCCHHHHHEECCCCC
GPLAADQAYAASPDGRPDHPFVFRMSAMAPTRSTAGGEVRIVDSHNFPVSRTVAAALVTV
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCHHHEEEEEEEEE
KPGGLRELHWHPDNDEWQYFIKGTGRMTVFNTGPAAQTVDFSPGDVGYVEKNLGHYIKNT
CCCCCEEECCCCCCCCEEEEEEECCEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHCC
GKEDLMFLEIFKSDHFAEVTLSQWLAGVPRQLLREHLRVDDETLDAIHDLKRRRDVIA
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDLKRRSVLVGAAAGAVALGAAAAAKAAEFGNPDMPAQGAINSTPIAISDPGPQSPQLR
CCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
GALPSFSNPPATDVGGMPIPWASFNLAHKRIQAGGWAREVTTKAFPVSKDIAGVNMRLGP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEEECC
GGVRELHWHQQAEWAIMVSGQVRITTIDTKGRAEVADVQSGDIWYFPPGLPHSLQGLGDN
CCCHHHHHCCCCCEEEEEECEEEEEEECCCCCCEEEECCCCCEEEECCCCCHHHHCCCCC
GGEFVLAFDNGAAGEFNTLMLSDWLAHTPPEILAQNFGVPAEKFKEIPLEQLWIYQGAKA
CCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHCCHHHHHEECCCCC
GPLAADQAYAASPDGRPDHPFVFRMSAMAPTRSTAGGEVRIVDSHNFPVSRTVAAALVTV
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCHHHEEEEEEEEE
KPGGLRELHWHPDNDEWQYFIKGTGRMTVFNTGPAAQTVDFSPGDVGYVEKNLGHYIKNT
CCCCCEEECCCCCCCCEEEEEEECCEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHCC
GKEDLMFLEIFKSDHFAEVTLSQWLAGVPRQLLREHLRVDDETLDAIHDLKRRRDVIA
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 11546787 [H]